RNA–Protein interactions for RNA: YDL139C

SCM3, Transcript of Nonhistone component of centromeric chromatin, yeastyeast

Gene SCM3, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCM3YDL139C MED4Q12343 284 aa4.18□□□□□ -1.74
SCM3YDL139C YPR145C-AQ2V2P0 78 aa4.18□□□□□ -1.74
SCM3YDL139C YLR146W-AQ2V2P1 62 aa4.18□□□□□ -1.74
SCM3YDL139C PRP8P33334 2413 aaKnown RBP4.18□□□□□ -1.74
SCM3YDL139C BPH1P25356 2167 aa4.18□□□□□ -1.74
SCM3YDL139C YER190C-BP0CX94 160 aa4.17□□□□□ -1.74
SCM3YDL139C YEL077W-AP0CX95 160 aa4.17□□□□□ -1.74
SCM3YDL139C YGR296C-BP0CX96 160 aa4.17□□□□□ -1.74
SCM3YDL139C YPL283W-BP0CX97 160 aa4.17□□□□□ -1.74
SCM3YDL139C YPR204C-AP0CX98 160 aa4.17□□□□□ -1.74
SCM3YDL139C CKA1P15790 372 aa4.17□□□□□ -1.74
SCM3YDL139C YBR144CP34215 104 aa4.17□□□□□ -1.74
SCM3YDL139C CBT1P36038 271 aaPredicted RBP4.17□□□□□ -1.74
SCM3YDL139C MIA40P36046 403 aa4.17□□□□□ -1.74
SCM3YDL139C YKL162CP36052 402 aa4.17□□□□□ -1.74
SCM3YDL139C YGP1P38616 354 aaKnown RBP4.17□□□□□ -1.74
SCM3YDL139C LAG1P38703 411 aa4.17□□□□□ -1.74
SCM3YDL139C LSM12P38828 187 aaKnown RBP4.17□□□□□ -1.74
SCM3YDL139C ECM14P38836 430 aa4.17□□□□□ -1.74
SCM3YDL139C RPS0BP46654 252 aaKnown RBP4.17□□□□□ -1.74
SCM3YDL139C MRX5P47007 382 aa4.17□□□□□ -1.74
SCM3YDL139C LSM1P47017 172 aaKnown RBP4.17□□□□□ -1.74
SCM3YDL139C MCM22P47167 239 aa4.17□□□□□ -1.74
SCM3YDL139C SOL1P50278 321 aa4.17□□□□□ -1.74
SCM3YDL139C MSO1P53604 210 aaKnown RBP4.17□□□□□ -1.74
SCM3YDL139C HCH1P53834 153 aa4.17□□□□□ -1.74
SCM3YDL139C FMP41P53889 259 aaKnown RBP4.17□□□□□ -1.74
SCM3YDL139C CRZ1P53968 678 aa4.17□□□□□ -1.74
SCM3YDL139C ADD37Q03233 198 aa4.17□□□□□ -1.74
SCM3YDL139C ERP1Q05359 219 aaKnown RBP4.17□□□□□ -1.74
SCM3YDL139C YDR286CQ05530 114 aa4.17□□□□□ -1.74
SCM3YDL139C PIN3Q06449 215 aa4.17□□□□□ -1.74
SCM3YDL139C TMC1Q08422 150 aaPredicted RBP4.17□□□□□ -1.74
SCM3YDL139C YOR292CQ08743 309 aa4.17□□□□□ -1.74
SCM3YDL139C YLR112WQ12130 139 aa4.17□□□□□ -1.74
SCM3YDL139C RFA3P26755 122 aaKnown RBP4.16□□□□□ -1.74
SCM3YDL139C YBR220CP38318 560 aa4.16□□□□□ -1.74
SCM3YDL139C ASP1P38986 381 aaPredicted RBP4.16□□□□□ -1.74
SCM3YDL139C PCL7P40186 285 aa4.16□□□□□ -1.74
SCM3YDL139C CCS1P40202 249 aaKnown RBP4.16□□□□□ -1.74
SCM3YDL139C YMR144WP40214 342 aaKnown RBP4.16□□□□□ -1.74
SCM3YDL139C GNA1P43577 159 aaPredicted RBP4.16□□□□□ -1.74
SCM3YDL139C ARP3P47117 449 aaKnown RBP4.16□□□□□ -1.74
SCM3YDL139C SMM1P53720 384 aaKnown RBP4.16□□□□□ -1.74
SCM3YDL139C HSK3P69852 69 aa4.16□□□□□ -1.74
SCM3YDL139C YDC1Q02896 317 aa4.16□□□□□ -1.74
SCM3YDL139C GMC1Q04399 608 aa4.16□□□□□ -1.74
SCM3YDL139C VAM3Q12241 283 aa4.16□□□□□ -1.74
SCM3YDL139C PRR2Q12310 699 aa4.16□□□□□ -1.74
SCM3YDL139C DGK1Q12382 290 aa4.16□□□□□ -1.74
SCM3YDL139C MEC1P38111 2368 aa4.16□□□□□ -1.74
SCM3YDL139C DFR1P07807 211 aaKnown RBP RIP-Chip data4.15□□□□□ -1.75not detected
SCM3YDL139C YKR045CP36138 183 aa4.15□□□□□ -1.75
SCM3YDL139C PRS2P38620 318 aaKnown RBP4.15□□□□□ -1.75
SCM3YDL139C HUA1P40325 198 aa4.15□□□□□ -1.75
SCM3YDL139C YGR269WP40326 108 aa4.15□□□□□ -1.75
SCM3YDL139C YJL213WP40896 331 aa4.15□□□□□ -1.75
SCM3YDL139C RPL15BP54780 204 aaPredicted RBP4.15□□□□□ -1.75
SCM3YDL139C ACT1P60010 375 aaKnown RBP4.15□□□□□ -1.75
SCM3YDL139C DYN2Q02647 92 aa4.15□□□□□ -1.75
SCM3YDL139C YHP1Q04116 353 aa4.15□□□□□ -1.75
SCM3YDL139C YMR253CQ04835 414 aa4.15□□□□□ -1.75
SCM3YDL139C NOC4Q06512 552 aaPredicted RBP4.15□□□□□ -1.75
SCM3YDL139C POS5Q06892 414 aa4.15□□□□□ -1.75
SCM3YDL139C FCY22Q12119 530 aa4.15□□□□□ -1.75
SCM3YDL139C USB1Q12208 290 aaKnown RBP4.15□□□□□ -1.75
SCM3YDL139C YCL048W-AQ2V2Q2 79 aa4.15□□□□□ -1.75
SCM3YDL139C SSA3P09435 649 aaKnown RBP4.14□□□□□ -1.75
SCM3YDL139C SPS4P09937 338 aa4.14□□□□□ -1.75
SCM3YDL139C UBI4P0CG63 381 aaKnown RBP4.14□□□□□ -1.75
SCM3YDL139C MRS3P10566 314 aa4.14□□□□□ -1.75
SCM3YDL139C URA5P13298 226 aaKnown RBP4.14□□□□□ -1.75
SCM3YDL139C CDC50P25656 391 aa4.14□□□□□ -1.75
SCM3YDL139C AHT1P29589 182 aa4.14□□□□□ -1.75
SCM3YDL139C ICS2P38284 255 aa4.14□□□□□ -1.75
SCM3YDL139C NTC20P38302 140 aaPredicted RBP4.14□□□□□ -1.75
SCM3YDL139C RPA34P47006 233 aaPredicted RBP4.14□□□□□ -1.75
SCM3YDL139C YJR056CP47115 236 aa4.14□□□□□ -1.75
SCM3YDL139C PKP2P53170 491 aa4.14□□□□□ -1.75
SCM3YDL139C GPI15P53961 229 aa4.14□□□□□ -1.75
SCM3YDL139C RPL21AQ02753 160 aaKnown RBP4.14□□□□□ -1.75
SCM3YDL139C YOL024WQ08172 172 aa4.14□□□□□ -1.75
SCM3YDL139C FCY1Q12178 158 aa4.14□□□□□ -1.75
SCM3YDL139C RPL21BQ12672 160 aaKnown RBP4.14□□□□□ -1.75
SCM3YDL139C COX19Q3E731 98 aa4.14□□□□□ -1.75
SCM3YDL139C BOL1Q3E793 110 aa4.14□□□□□ -1.75
SCM3YDL139C ATG40Q99325 256 aa4.14□□□□□ -1.75
SCM3YDL139C RPL42AP0CX27 106 aaKnown RBP4.13□□□□□ -1.75
SCM3YDL139C RPL42BP0CX28 106 aaKnown RBP4.13□□□□□ -1.75
SCM3YDL139C ROX3P25046 220 aa4.13□□□□□ -1.75
SCM3YDL139C NTF2P33331 125 aaKnown RBP4.13□□□□□ -1.75
SCM3YDL139C RPL32P38061 130 aaKnown RBP4.13□□□□□ -1.75
SCM3YDL139C YBR090CP38253 122 aa4.13□□□□□ -1.75
SCM3YDL139C YBR096WP38256 230 aa4.13□□□□□ -1.75
SCM3YDL139C GEP7P53171 287 aa4.13□□□□□ -1.75
SCM3YDL139C IZH1Q03419 316 aa4.13□□□□□ -1.75
SCM3YDL139C YMR007WQ03675 126 aa4.13□□□□□ -1.75
SCM3YDL139C DCS1Q06151 350 aa4.13□□□□□ -1.75
SCM3YDL139C YPL264CQ08980 353 aa4.13□□□□□ -1.75
SCM3YDL139C ATX2Q12067 313 aa4.13□□□□□ -1.75
Retrieved 100 of 5,963 RNA–protein pairs in 41.2 ms