RNA–Protein interactions for RNA: YOR132W

VPS17, Transcript of Subunit of the membrane-associated retromer complex, yeastyeast

Gene VPS17, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS17YOR132W RRS1Q08746 203 aaKnown RBP2.83□□□□□ -1.96
VPS17YOR132W PCL9Q12477 304 aa2.83□□□□□ -1.96
VPS17YOR132W PRM4Q12498 284 aa2.83□□□□□ -1.96
VPS17YOR132W STT4P37297 1900 aa2.83□□□□□ -1.96
VPS17YOR132W SLH1P53327 1967 aaKnown RBP2.83□□□□□ -1.96
VPS17YOR132W SIR2P06700 562 aa2.82□□□□□ -1.96
VPS17YOR132W PET54P10834 293 aa2.82□□□□□ -1.96
VPS17YOR132W CTA1P15202 515 aa2.82□□□□□ -1.96
VPS17YOR132W CPT1P17898 393 aa2.82□□□□□ -1.96
VPS17YOR132W PPH21P23594 369 aa2.82□□□□□ -1.96
VPS17YOR132W HYM1P32464 399 aa2.82□□□□□ -1.96
VPS17YOR132W SPS18P32572 300 aa2.82□□□□□ -1.96
VPS17YOR132W SHE1P38200 338 aa2.82□□□□□ -1.96
VPS17YOR132W YBR242WP38331 238 aa2.82□□□□□ -1.96
VPS17YOR132W GRE3P38715 327 aaKnown RBP RIP-Chip data2.82□□□□□ -1.96not detected
VPS17YOR132W COX14P39103 70 aa2.82□□□□□ -1.96
VPS17YOR132W VMA7P39111 118 aa2.82□□□□□ -1.96
VPS17YOR132W HPA3P39979 161 aa2.82□□□□□ -1.96
VPS17YOR132W ICE2P40499 491 aa2.82□□□□□ -1.96
VPS17YOR132W PFS2P42841 465 aaKnown RBP2.82□□□□□ -1.96
VPS17YOR132W FLC3P53121 802 aa2.82□□□□□ -1.96
VPS17YOR132W NSA1P53136 463 aaPredicted RBP2.82□□□□□ -1.96
VPS17YOR132W MMS2P53152 137 aa2.82□□□□□ -1.96
VPS17YOR132W CWC25P53854 179 aaKnown RBP2.82□□□□□ -1.96
VPS17YOR132W LSM7P53905 115 aaKnown RBP2.82□□□□□ -1.96
VPS17YOR132W RHO3Q00245 231 aaKnown RBP2.82□□□□□ -1.96
VPS17YOR132W MRPS16Q02608 121 aa2.82□□□□□ -1.96
VPS17YOR132W SCS7Q03529 384 aa2.82□□□□□ -1.96
VPS17YOR132W TDA1Q03533 586 aa2.82□□□□□ -1.96
VPS17YOR132W YML108WQ03759 105 aa2.82□□□□□ -1.96
VPS17YOR132W GMC1Q04399 608 aa2.82□□□□□ -1.96
VPS17YOR132W LOA1Q06508 300 aa2.82□□□□□ -1.96
VPS17YOR132W MRX9Q07349 420 aaKnown RBP2.82□□□□□ -1.96
VPS17YOR132W HEM25Q07534 307 aa2.82□□□□□ -1.96
VPS17YOR132W RRP40Q08285 240 aaKnown RBP2.82□□□□□ -1.96
VPS17YOR132W MMT2Q08970 484 aa2.82□□□□□ -1.96
VPS17YOR132W MDM32Q12171 622 aa2.82□□□□□ -1.96
VPS17YOR132W FOL3Q12676 427 aaPredicted RBP2.82□□□□□ -1.96
VPS17YOR132W MSB2P32334 1306 aa2.82□□□□□ -1.96
VPS17YOR132W TRP1P00912 224 aa2.82□□□□□ -1.96
VPS17YOR132W SPS2P08459 502 aa2.82□□□□□ -1.96
VPS17YOR132W SEN2P16658 377 aa2.82□□□□□ -1.96
VPS17YOR132W PRE7P23724 241 aaKnown RBP2.82□□□□□ -1.96
VPS17YOR132W TRR1P29509 319 aaKnown RBP2.82□□□□□ -1.96
VPS17YOR132W KTI12P34253 313 aaKnown RBP2.82□□□□□ -1.96
VPS17YOR132W ANR2P36090 516 aaPredicted RBP2.82□□□□□ -1.96
VPS17YOR132W POP7P38291 140 aa2.82□□□□□ -1.96
VPS17YOR132W YER137CP40083 148 aaKnown RBP2.82□□□□□ -1.96
VPS17YOR132W OST3P48439 350 aa2.82□□□□□ -1.96
VPS17YOR132W NNT1Q05874 261 aa2.82□□□□□ -1.96
VPS17YOR132W COQ10Q08058 207 aa2.82□□□□□ -1.96
VPS17YOR132W YNG1Q08465 219 aa2.82□□□□□ -1.96
VPS17YOR132W YOR283WQ12040 230 aaKnown RBP2.82□□□□□ -1.96
VPS17YOR132W SPC3Q12133 184 aa2.82□□□□□ -1.96
VPS17YOR132W TIR4Q12218 487 aaPredicted RBP2.82□□□□□ -1.96
VPS17YOR132W MCT1Q12283 360 aa2.82□□□□□ -1.96
VPS17YOR132W TFC7Q12415 435 aa2.82□□□□□ -1.96
VPS17YOR132W HEM4P06174 275 aa2.81□□□□□ -1.96
VPS17YOR132W PIS1P06197 220 aaKnown RBP2.81□□□□□ -1.96
VPS17YOR132W YKR104WP0CE69 306 aa2.81□□□□□ -1.96
VPS17YOR132W YOL163WP0CF20 169 aa2.81□□□□□ -1.96
VPS17YOR132W RPS8AP0CX39 200 aaKnown RBP2.81□□□□□ -1.96
VPS17YOR132W RPS8BP0CX40 200 aaKnown RBP2.81□□□□□ -1.96
VPS17YOR132W RPS18AP0CX55 146 aaKnown RBP2.81□□□□□ -1.96
VPS17YOR132W RPS18BP0CX56 146 aaPredicted RBP2.81□□□□□ -1.96
VPS17YOR132W SHG1P38337 142 aa2.81□□□□□ -1.96
VPS17YOR132W WSC4P38739 605 aa2.81□□□□□ -1.96
VPS17YOR132W PEX22P39718 180 aa2.81□□□□□ -1.96
VPS17YOR132W MRPL49P40858 161 aaPredicted RBP2.81□□□□□ -1.96
VPS17YOR132W SNX4P47057 423 aa2.81□□□□□ -1.96
VPS17YOR132W TPC1P53257 314 aa2.81□□□□□ -1.96
VPS17YOR132W PGA1P53896 198 aa2.81□□□□□ -1.96
VPS17YOR132W YML096WQ04489 525 aa2.81□□□□□ -1.96
VPS17YOR132W YMR252CQ04814 134 aa2.81□□□□□ -1.96
VPS17YOR132W VPS68Q12016 184 aa2.81□□□□□ -1.96
VPS17YOR132W ATG41Q12048 136 aa2.81□□□□□ -1.96
VPS17YOR132W FCY22Q12119 530 aa2.81□□□□□ -1.96
VPS17YOR132W USB1Q12208 290 aaKnown RBP2.81□□□□□ -1.96
VPS17YOR132W RTR2Q12378 196 aa2.81□□□□□ -1.96
VPS17YOR132W YLR099W-AQ3E798 87 aa2.81□□□□□ -1.96
VPS17YOR132W YAL064W-BO13512 126 aa2.8□□□□□ -1.96
VPS17YOR132W HIS3P06633 220 aa2.8□□□□□ -1.96
VPS17YOR132W STE7P06784 515 aa2.8□□□□□ -1.96
VPS17YOR132W YOL162WP0CF19 215 aa2.8□□□□□ -1.96
VPS17YOR132W FUN26P31381 517 aa2.8□□□□□ -1.96
VPS17YOR132W ALK2P32789 676 aaPredicted RBP2.8□□□□□ -1.96
VPS17YOR132W TMA19P35691 167 aaKnown RBP2.8□□□□□ -1.96
VPS17YOR132W SRP102P36057 244 aaPredicted RBP2.8□□□□□ -1.96
VPS17YOR132W RPS20P38701 121 aaKnown RBP2.8□□□□□ -1.96
VPS17YOR132W ECM34P38728 170 aa2.8□□□□□ -1.96
VPS17YOR132W HTD2P38790 280 aaKnown RBP2.8□□□□□ -1.96
VPS17YOR132W CHL4P38907 458 aa2.8□□□□□ -1.96
VPS17YOR132W APS3P47064 194 aa2.8□□□□□ -1.96
VPS17YOR132W BAT2P47176 376 aaKnown RBP2.8□□□□□ -1.96
VPS17YOR132W RPS12P48589 143 aaKnown RBP2.8□□□□□ -1.96
VPS17YOR132W BRR6P53062 197 aa2.8□□□□□ -1.96
VPS17YOR132W TOS8P53147 276 aa2.8□□□□□ -1.96
VPS17YOR132W FYV6P53913 173 aa2.8□□□□□ -1.96
VPS17YOR132W NRK1P53915 240 aa2.8□□□□□ -1.96
VPS17YOR132W DID2P69771 204 aa2.8□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 78.1 ms