RNA–Protein interactions for RNA: YJR057W

CDC8, Transcript of Thymidylate and uridylate kinase, yeastyeast

Gene CDC8, Length 651 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC8YJR057W CDC28P00546 298 aaKnown RBP3.16□□□□□ -1.9
CDC8YJR057W RPL40AP0CH08 128 aaKnown RBP3.16□□□□□ -1.9
CDC8YJR057W RPL40BP0CH09 128 aaKnown RBP3.16□□□□□ -1.9
CDC8YJR057W ARO3P14843 370 aaKnown RBP3.16□□□□□ -1.9
CDC8YJR057W SEC22P22214 214 aa3.16□□□□□ -1.9
CDC8YJR057W IFM1P25038 676 aa3.16□□□□□ -1.9
CDC8YJR057W TRR1P29509 319 aaKnown RBP3.16□□□□□ -1.9
CDC8YJR057W ERG3P32353 365 aa3.16□□□□□ -1.9
CDC8YJR057W SRY1P36007 326 aa3.16□□□□□ -1.9
CDC8YJR057W FIG1P38224 298 aa3.16□□□□□ -1.9
CDC8YJR057W YPC1P38298 316 aa3.16□□□□□ -1.9
CDC8YJR057W BFR1P38934 470 aaKnown RBP RIP-Chip data3.16□□□□□ -1.9 RIP-Chip
CDC8YJR057W YMR144WP40214 342 aaKnown RBP3.16□□□□□ -1.9
CDC8YJR057W BMT5P40493 336 aa3.16□□□□□ -1.9
CDC8YJR057W YJR011CP47086 261 aaPredicted RBP3.16□□□□□ -1.9
CDC8YJR057W YJR111CP47148 283 aaKnown RBP3.16□□□□□ -1.9
CDC8YJR057W UFD1P53044 361 aa3.16□□□□□ -1.9
CDC8YJR057W NIF3P53081 288 aa3.16□□□□□ -1.9
CDC8YJR057W ALG9P53868 555 aaKnown RBP3.16□□□□□ -1.9
CDC8YJR057W MRPL19P53875 158 aa3.16□□□□□ -1.9
CDC8YJR057W APJ1P53940 528 aa3.16□□□□□ -1.9
CDC8YJR057W HRI1Q05905 244 aaKnown RBP3.16□□□□□ -1.9
CDC8YJR057W MRX9Q07349 420 aaKnown RBP3.16□□□□□ -1.9
CDC8YJR057W SCP1Q08873 200 aa3.16□□□□□ -1.9
CDC8YJR057W AEP3Q12089 606 aa3.16□□□□□ -1.9
CDC8YJR057W USB1Q12208 290 aaKnown RBP3.16□□□□□ -1.9
CDC8YJR057W YDL180WQ12301 547 aa3.16□□□□□ -1.9
CDC8YJR057W EAF3Q12432 401 aa3.16□□□□□ -1.9
CDC8YJR057W IZH2Q12442 317 aa3.16□□□□□ -1.9
CDC8YJR057W YJR112W-AQ3E743 109 aa3.16□□□□□ -1.9
CDC8YJR057W UBA3Q99344 299 aa3.16□□□□□ -1.9
CDC8YJR057W TPI1P00942 248 aaKnown RBP3.15□□□□□ -1.91
CDC8YJR057W YLL053CP0CD98 152 aa3.15□□□□□ -1.91
CDC8YJR057W MSI1P13712 422 aa3.15□□□□□ -1.91
CDC8YJR057W OLE1P21147 510 aaKnown RBP3.15□□□□□ -1.91
CDC8YJR057W MIR1P23641 311 aaKnown RBP3.15□□□□□ -1.91
CDC8YJR057W TIP1P27654 210 aaPredicted RBP3.15□□□□□ -1.91
CDC8YJR057W GLC7P32598 312 aaKnown RBP3.15□□□□□ -1.91
CDC8YJR057W EMP24P32803 203 aaKnown RBP3.15□□□□□ -1.91
CDC8YJR057W MRPS5P33759 307 aa3.15□□□□□ -1.91
CDC8YJR057W MRPL39P36533 70 aa3.15□□□□□ -1.91
CDC8YJR057W NAT2P37293 288 aa3.15□□□□□ -1.91
CDC8YJR057W SSO2P39926 295 aa3.15□□□□□ -1.91
CDC8YJR057W YEL057CP39983 233 aa3.15□□□□□ -1.91
CDC8YJR057W YIR035CP40579 254 aa3.15□□□□□ -1.91
CDC8YJR057W YHC3P47040 408 aa3.15□□□□□ -1.91
CDC8YJR057W SSN8P47821 323 aa3.15□□□□□ -1.91
CDC8YJR057W TIM11P81449 96 aaPredicted RBP3.15□□□□□ -1.91
CDC8YJR057W RCE1Q03530 315 aa3.15□□□□□ -1.91
CDC8YJR057W ANT1Q06497 328 aa3.15□□□□□ -1.91
CDC8YJR057W ATP14Q12349 124 aa3.15□□□□□ -1.91
CDC8YJR057W TFC7Q12415 435 aa3.15□□□□□ -1.91
CDC8YJR057W HUT1Q12520 339 aa3.15□□□□□ -1.91
CDC8YJR057W YBR126W-AQ8TGU7 68 aa3.15□□□□□ -1.91
CDC8YJR057W IRA2P19158 3079 aa3.15□□□□□ -1.91
CDC8YJR057W REP2P03872 296 aa3.14□□□□□ -1.91
CDC8YJR057W RPL25P04456 142 aaKnown RBP3.14□□□□□ -1.91
CDC8YJR057W SAG1P20840 650 aa3.14□□□□□ -1.91
CDC8YJR057W ATG15P25641 520 aa3.14□□□□□ -1.91
CDC8YJR057W PEX4P29340 183 aa3.14□□□□□ -1.91
CDC8YJR057W REC114P32841 428 aa3.14□□□□□ -1.91
CDC8YJR057W PDC2P32896 925 aa3.14□□□□□ -1.91
CDC8YJR057W MCH2P36032 473 aa3.14□□□□□ -1.91
CDC8YJR057W COS8P38723 381 aa3.14□□□□□ -1.91
CDC8YJR057W YER079WP40052 210 aaKnown RBP3.14□□□□□ -1.91
CDC8YJR057W YER084WP40057 128 aa3.14□□□□□ -1.91
CDC8YJR057W OST1P41543 476 aaKnown RBP3.14□□□□□ -1.91
CDC8YJR057W UBC12P52491 188 aa3.14□□□□□ -1.91
CDC8YJR057W DUO1P53168 247 aaKnown RBP3.14□□□□□ -1.91
CDC8YJR057W CAB5Q03941 241 aa3.14□□□□□ -1.91
CDC8YJR057W THI74Q04083 370 aa3.14□□□□□ -1.91
CDC8YJR057W YDR391CQ04170 232 aa3.14□□□□□ -1.91
CDC8YJR057W NOC4Q06512 552 aaPredicted RBP3.14□□□□□ -1.91
CDC8YJR057W RAF1Q06891 181 aa3.14□□□□□ -1.91
CDC8YJR057W RRT7Q07829 113 aa3.14□□□□□ -1.91
CDC8YJR057W RFU1Q08003 200 aa3.14□□□□□ -1.91
CDC8YJR057W YOR186WQ08560 144 aa3.14□□□□□ -1.91
CDC8YJR057W VAM3Q12241 283 aa3.14□□□□□ -1.91
CDC8YJR057W MED4Q12343 284 aa3.14□□□□□ -1.91
CDC8YJR057W QCR2P07257 368 aa3.13□□□□□ -1.91
CDC8YJR057W RPL35AP0CX84 120 aaKnown RBP3.13□□□□□ -1.91
CDC8YJR057W RPL35BP0CX85 120 aaKnown RBP3.13□□□□□ -1.91
CDC8YJR057W CKA1P15790 372 aa3.13□□□□□ -1.91
CDC8YJR057W FUS3P16892 353 aaKnown RBP3.13□□□□□ -1.91
CDC8YJR057W YCR101CP25607 182 aa3.13□□□□□ -1.91
CDC8YJR057W OCH1P31755 480 aa3.13□□□□□ -1.91
CDC8YJR057W RPB7P34087 171 aa3.13□□□□□ -1.91
CDC8YJR057W SWD2P36104 329 aaPredicted RBP3.13□□□□□ -1.91
CDC8YJR057W LSM12P38828 187 aaKnown RBP3.13□□□□□ -1.91
CDC8YJR057W ASP1P38986 381 aaPredicted RBP3.13□□□□□ -1.91
CDC8YJR057W POP2P39008 433 aa3.13□□□□□ -1.91
CDC8YJR057W GCV3P39726 170 aaPredicted RBP3.13□□□□□ -1.91
CDC8YJR057W FLX1P40464 311 aa3.13□□□□□ -1.91
CDC8YJR057W GLR1P41921 483 aaKnown RBP3.13□□□□□ -1.91
CDC8YJR057W PNC1P53184 216 aaKnown RBP3.13□□□□□ -1.91
CDC8YJR057W SLX9P53251 210 aaPredicted RBP3.13□□□□□ -1.91
CDC8YJR057W YPL077CQ02831 240 aa3.13□□□□□ -1.91
CDC8YJR057W BER1Q06688 274 aaKnown RBP3.13□□□□□ -1.91
CDC8YJR057W YOL024WQ08172 172 aa3.13□□□□□ -1.91
CDC8YJR057W RRS1Q08746 203 aaKnown RBP3.13□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 7.4 ms