RNA–Protein interactions for RNA: YJR057W

CDC8, Transcript of Thymidylate and uridylate kinase, yeastyeast

Gene CDC8, Length 651 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC8YJR057W MTC1P47018 478 aaKnown RBP16.59■□□□□ 0.25
CDC8YJR057W DRS1P32892 752 aaKnown RBP15.46■□□□□ 0.07
CDC8YJR057W FAP1P53971 965 aa14.98□□□□□ -0.01
CDC8YJR057W PRY3P47033 881 aa14.03□□□□□ -0.16
CDC8YJR057W PRI1P10363 409 aa14□□□□□ -0.17
CDC8YJR057W AAD16Q02895 342 aa13.95□□□□□ -0.18
CDC8YJR057W ISW2Q08773 1120 aa13.83□□□□□ -0.2
CDC8YJR057W RPG1P38249 964 aaKnown RBP13.6□□□□□ -0.23
CDC8YJR057W DIP2Q12220 943 aaPredicted RBP13.58□□□□□ -0.24
CDC8YJR057W HAA1Q12753 694 aaKnown RBP13.26□□□□□ -0.29
CDC8YJR057W TSR3Q12094 313 aaKnown RBP13.18□□□□□ -0.3
CDC8YJR057W RSE1Q04693 1361 aaKnown RBP13.17□□□□□ -0.3
CDC8YJR057W YCK3P39962 524 aa13.11□□□□□ -0.31
CDC8YJR057W AVT3P36062 692 aa13.04□□□□□ -0.32
CDC8YJR057W BFR2Q06631 534 aaKnown RBP12.85□□□□□ -0.35
CDC8YJR057W MRPL32P25348 183 aa12.78□□□□□ -0.36
CDC8YJR057W REB1P21538 810 aa12.71□□□□□ -0.37
CDC8YJR057W RPL17AP05740 184 aaKnown RBP12.7□□□□□ -0.38
CDC8YJR057W RPL17BP46990 184 aaKnown RBP12.7□□□□□ -0.38
CDC8YJR057W YGL015CP33199 130 aa12.3□□□□□ -0.44
CDC8YJR057W SPT21P35209 758 aa12.11□□□□□ -0.47
CDC8YJR057W YKR023WP36119 530 aaKnown RBP11.99□□□□□ -0.49
CDC8YJR057W CDC27P38042 758 aa11.99□□□□□ -0.49
CDC8YJR057W UBP10P53874 792 aaPredicted RBP11.81□□□□□ -0.52
CDC8YJR057W TFC8Q12308 588 aa11.78□□□□□ -0.52
CDC8YJR057W RIM101P33400 625 aa11.74□□□□□ -0.53
CDC8YJR057W HOP09932 586 aa11.73□□□□□ -0.53
CDC8YJR057W MAP2P38174 421 aaKnown RBP11.66□□□□□ -0.54
CDC8YJR057W DCD1P06773 312 aa11.62□□□□□ -0.55
CDC8YJR057W SCY1P53009 804 aa11.44□□□□□ -0.58
CDC8YJR057W TFA1P36100 482 aa11.41□□□□□ -0.58
CDC8YJR057W BCH2P36122 765 aa11.38□□□□□ -0.59
CDC8YJR057W TIF4632P39936 914 aaKnown RBP11.38□□□□□ -0.59
CDC8YJR057W SLX5P32828 619 aaKnown RBP11.36□□□□□ -0.59
CDC8YJR057W TGL3P40308 642 aa11.29□□□□□ -0.6
CDC8YJR057W OXP1P28273 1286 aa11.27□□□□□ -0.61
CDC8YJR057W YIL055CP40523 627 aaKnown RBP11.25□□□□□ -0.61
CDC8YJR057W BUD31P25337 157 aaPredicted RBP11.21□□□□□ -0.61
CDC8YJR057W PTP3P40048 928 aa11.19□□□□□ -0.62
CDC8YJR057W EPS1P40557 701 aa11.1□□□□□ -0.63
CDC8YJR057W BDF1P35817 686 aa11.06□□□□□ -0.64
CDC8YJR057W RSM7P47150 247 aa11.03□□□□□ -0.64
CDC8YJR057W UBP9P39967 754 aa11.01□□□□□ -0.65
CDC8YJR057W BBC1P47068 1157 aa11.01□□□□□ -0.65
CDC8YJR057W YAH1Q12184 172 aaKnown RBP10.96□□□□□ -0.65
CDC8YJR057W AI2P03876 854 aa10.91□□□□□ -0.66
CDC8YJR057W MST1P07236 462 aa10.79□□□□□ -0.68
CDC8YJR057W NSR1P27476 414 aaKnown RBP RIP-Chip data10.79□□□□□ -0.68 RIP-Chip
CDC8YJR057W YLR271WQ06152 274 aa10.78□□□□□ -0.68
CDC8YJR057W YOR238WQ08634 303 aa10.78□□□□□ -0.68
CDC8YJR057W ARP8Q12386 881 aaKnown RBP RIP-Chip data10.72□□□□□ -0.69not detected
CDC8YJR057W SIS1P25294 352 aaKnown RBP10.71□□□□□ -0.69
CDC8YJR057W SSP1P38871 571 aa10.7□□□□□ -0.7
CDC8YJR057W YAP5P40574 245 aa10.7□□□□□ -0.7
CDC8YJR057W PSD2P53037 1138 aaKnown RBP10.64□□□□□ -0.71
CDC8YJR057W YBL029C-AQ3E756 94 aa10.54□□□□□ -0.72
CDC8YJR057W MRM1P25270 412 aa10.5□□□□□ -0.73
CDC8YJR057W VNX1P42839 908 aa10.49□□□□□ -0.73
CDC8YJR057W MGA2P40578 1113 aa10.48□□□□□ -0.73
CDC8YJR057W GTT3P39996 337 aa10.47□□□□□ -0.73
CDC8YJR057W SPP1Q03012 353 aa10.42□□□□□ -0.74
CDC8YJR057W WSC3Q12215 556 aa10.4□□□□□ -0.74
CDC8YJR057W CST9Q06032 482 aa10.37□□□□□ -0.75
CDC8YJR057W RTG3P38165 486 aa10.36□□□□□ -0.75
CDC8YJR057W TIF11P38912 153 aaKnown RBP10.33□□□□□ -0.76
CDC8YJR057W YMR1P47147 688 aaKnown RBP RIP-Chip data10.32□□□□□ -0.76not detected
CDC8YJR057W PIB1Q06651 286 aa10.3□□□□□ -0.76
CDC8YJR057W VPS29P38759 282 aa10.26□□□□□ -0.77
CDC8YJR057W MSB4Q12317 492 aa10.25□□□□□ -0.77
CDC8YJR057W DBP1P24784 617 aaKnown RBP10.24□□□□□ -0.77
CDC8YJR057W EAP1P36041 632 aaKnown RBP10.22□□□□□ -0.77
CDC8YJR057W ULI1P43604 169 aa10.2□□□□□ -0.78
CDC8YJR057W YJL171CP46992 396 aa10.15□□□□□ -0.78
CDC8YJR057W YFR006WP43590 535 aa10.14□□□□□ -0.79
CDC8YJR057W IOC2Q12072 812 aa10.14□□□□□ -0.79
CDC8YJR057W LDB19Q12502 818 aa10.14□□□□□ -0.79
CDC8YJR057W VMA1P17255 1071 aaKnown RBP10.13□□□□□ -0.79
CDC8YJR057W STS1P38637 319 aa10.13□□□□□ -0.79
CDC8YJR057W FKH1P40466 484 aa10.13□□□□□ -0.79
CDC8YJR057W AIR2Q12476 344 aaKnown RBP10.13□□□□□ -0.79
CDC8YJR057W YOL036WQ08206 761 aa10.12□□□□□ -0.79
CDC8YJR057W RCR1P38212 213 aa10.1□□□□□ -0.79
CDC8YJR057W SET4P42948 560 aa10.1□□□□□ -0.79
CDC8YJR057W SAM3Q08986 587 aa10.1□□□□□ -0.79
CDC8YJR057W TRP5P00931 707 aaKnown RBP10.03□□□□□ -0.8
CDC8YJR057W ABP1P15891 592 aaKnown RBP10.03□□□□□ -0.8
CDC8YJR057W BMT6Q12291 365 aa9.99□□□□□ -0.81
CDC8YJR057W RTG1P32607 177 aa9.98□□□□□ -0.81
CDC8YJR057W YNL035CP53962 389 aaKnown RBP9.98□□□□□ -0.81
CDC8YJR057W SEC61P32915 480 aa9.97□□□□□ -0.81
CDC8YJR057W GYP5Q12344 894 aa9.97□□□□□ -0.81
CDC8YJR057W NCR1Q12200 1170 aa9.96□□□□□ -0.82
CDC8YJR057W TFG1P41895 735 aaPredicted RBP9.92□□□□□ -0.82
CDC8YJR057W JIP4Q03361 876 aa9.92□□□□□ -0.82
CDC8YJR057W MAK11P20484 414 aaKnown RBP9.91□□□□□ -0.82
CDC8YJR057W HTA1P04911 132 aaKnown RBP9.9□□□□□ -0.82
CDC8YJR057W HTA2P04912 132 aa9.9□□□□□ -0.82
CDC8YJR057W RAM2P29703 316 aa9.85□□□□□ -0.83
CDC8YJR057W DCW1P36091 449 aa9.84□□□□□ -0.83
CDC8YJR057W MIF2P35201 549 aa9.83□□□□□ -0.84
Retrieved 100 of 5,963 RNA–protein pairs in 35.5 ms