RNA–Protein interactions for RNA: YFL044C

OTU1, Transcript of Deubiquitylation enzyme that binds to the chaperone-ATPase Cdc48p, yeastyeast

Gene OTU1, Length 906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
OTU1YFL044C CPR5P35176 225 aa3□□□□□ -1.93
OTU1YFL044C CBT1P36038 271 aaPredicted RBP3□□□□□ -1.93
OTU1YFL044C YKL070WP36087 169 aa3□□□□□ -1.93
OTU1YFL044C YND1P40009 630 aa3□□□□□ -1.93
OTU1YFL044C YGL204CP53089 101 aa3□□□□□ -1.93
OTU1YFL044C YMD8Q03697 442 aa3□□□□□ -1.93
OTU1YFL044C UPS1Q05776 175 aa3□□□□□ -1.93
OTU1YFL044C YPL225WQ08971 146 aaKnown RBP3□□□□□ -1.93
OTU1YFL044C PAA1Q12447 191 aaKnown RBP3□□□□□ -1.93
OTU1YFL044C KIN28P06242 306 aa2.99□□□□□ -1.93
OTU1YFL044C MATALPHA1P0CY06 175 aa2.99□□□□□ -1.93
OTU1YFL044C HMLALPHA1P0CY07 175 aa2.99□□□□□ -1.93
OTU1YFL044C IMP1P28627 190 aa2.99□□□□□ -1.93
OTU1YFL044C NDC1P32500 655 aa2.99□□□□□ -1.93
OTU1YFL044C YUH1P35127 236 aa2.99□□□□□ -1.93
OTU1YFL044C MST28P39552 234 aa2.99□□□□□ -1.93
OTU1YFL044C FIP1P45976 327 aa2.99□□□□□ -1.93
OTU1YFL044C MRX5P47007 382 aa2.99□□□□□ -1.93
OTU1YFL044C SSN8P47821 323 aa2.99□□□□□ -1.93
OTU1YFL044C SPO19Q03029 223 aa2.99□□□□□ -1.93
OTU1YFL044C SNZ1Q03148 297 aa2.99□□□□□ -1.93
OTU1YFL044C MIX17Q03667 156 aa2.99□□□□□ -1.93
OTU1YFL044C RRG8Q06109 277 aa2.99□□□□□ -1.93
OTU1YFL044C DTD1Q07648 150 aaKnown RBP2.99□□□□□ -1.93
OTU1YFL044C YPL199CQ08954 240 aa2.99□□□□□ -1.93
OTU1YFL044C YOP1Q12402 180 aa2.99□□□□□ -1.93
OTU1YFL044C MPD1Q12404 318 aaKnown RBP2.99□□□□□ -1.93
OTU1YFL044C DCP1Q12517 231 aaPredicted RBP2.99□□□□□ -1.93
OTU1YFL044C RPL24AP04449 155 aaKnown RBP2.98□□□□□ -1.93
OTU1YFL044C RPL25P04456 142 aaKnown RBP2.98□□□□□ -1.93
OTU1YFL044C MRS3P10566 314 aa2.98□□□□□ -1.93
OTU1YFL044C MRP1P10662 321 aaKnown RBP2.98□□□□□ -1.93
OTU1YFL044C CAP2P13517 287 aa2.98□□□□□ -1.93
OTU1YFL044C ATG22P25568 528 aa2.98□□□□□ -1.93
OTU1YFL044C RPL5P26321 297 aaKnown RBP2.98□□□□□ -1.93
OTU1YFL044C INO2P26798 304 aa2.98□□□□□ -1.93
OTU1YFL044C PEX4P29340 183 aa2.98□□□□□ -1.93
OTU1YFL044C SDS24P38314 527 aa2.98□□□□□ -1.93
OTU1YFL044C SSH1P38353 490 aaKnown RBP2.98□□□□□ -1.93
OTU1YFL044C PRS2P38620 318 aaKnown RBP2.98□□□□□ -1.93
OTU1YFL044C MDM31P38880 579 aa2.98□□□□□ -1.93
OTU1YFL044C SOP4P39543 234 aaPredicted RBP2.98□□□□□ -1.93
OTU1YFL044C RPA43P46669 326 aa2.98□□□□□ -1.93
OTU1YFL044C TTI2P47168 421 aa2.98□□□□□ -1.93
OTU1YFL044C TPT1Q12272 230 aaKnown RBP2.98□□□□□ -1.93
OTU1YFL044C EAF3Q12432 401 aa2.98□□□□□ -1.93
OTU1YFL044C ADK1P07170 222 aaKnown RBP2.97□□□□□ -1.93
OTU1YFL044C ATR1P13090 542 aa2.97□□□□□ -1.93
OTU1YFL044C SAR1P20606 190 aaKnown RBP2.97□□□□□ -1.93
OTU1YFL044C IDP1P21954 428 aaKnown RBP2.97□□□□□ -1.93
OTU1YFL044C YCR101CP25607 182 aa2.97□□□□□ -1.93
OTU1YFL044C GPX2P38143 162 aa2.97□□□□□ -1.93
OTU1YFL044C RIB5P38145 238 aa2.97□□□□□ -1.93
OTU1YFL044C SHE1P38200 338 aa2.97□□□□□ -1.93
OTU1YFL044C YBR137WP38276 179 aa2.97□□□□□ -1.93
OTU1YFL044C GEP4P38812 185 aa2.97□□□□□ -1.93
OTU1YFL044C AIM10P39965 576 aaKnown RBP2.97□□□□□ -1.93
OTU1YFL044C CCS1P40202 249 aaKnown RBP2.97□□□□□ -1.93
OTU1YFL044C RPL21AQ02753 160 aaKnown RBP2.97□□□□□ -1.93
OTU1YFL044C PEX30Q06169 523 aa2.97□□□□□ -1.93
OTU1YFL044C YLR173WQ06247 608 aa2.97□□□□□ -1.93
OTU1YFL044C YOR186WQ08560 144 aa2.97□□□□□ -1.93
OTU1YFL044C RFM1Q12192 310 aa2.97□□□□□ -1.93
OTU1YFL044C AYT1Q12226 474 aa2.97□□□□□ -1.93
OTU1YFL044C HUT1Q12520 339 aa2.97□□□□□ -1.93
OTU1YFL044C RPL21BQ12672 160 aaKnown RBP2.97□□□□□ -1.93
OTU1YFL044C CDC23P16522 626 aa2.96□□□□□ -1.94
OTU1YFL044C FAR1P21268 830 aa2.96□□□□□ -1.94
OTU1YFL044C VMA6P32366 345 aaKnown RBP2.96□□□□□ -1.94
OTU1YFL044C SPS18P32572 300 aa2.96□□□□□ -1.94
OTU1YFL044C VAM7P32912 316 aa2.96□□□□□ -1.94
OTU1YFL044C SNC2P33328 115 aa2.96□□□□□ -1.94
OTU1YFL044C RCN1P36054 211 aa2.96□□□□□ -1.94
OTU1YFL044C PMU1P36069 295 aa2.96□□□□□ -1.94
OTU1YFL044C PRS4P38063 326 aaPredicted RBP2.96□□□□□ -1.94
OTU1YFL044C YRB2P40517 327 aa2.96□□□□□ -1.94
OTU1YFL044C RPR2P40571 144 aa2.96□□□□□ -1.94
OTU1YFL044C AGX1P43567 385 aa2.96□□□□□ -1.94
OTU1YFL044C FMP33P46998 180 aa2.96□□□□□ -1.94
OTU1YFL044C YJL118WP47022 219 aa2.96□□□□□ -1.94
OTU1YFL044C PAU12P53343 120 aa2.96□□□□□ -1.94
OTU1YFL044C YMR099CQ03161 297 aaKnown RBP2.96□□□□□ -1.94
OTU1YFL044C LOT6Q07923 191 aa2.96□□□□□ -1.94
OTU1YFL044C ATG40Q99325 256 aa2.96□□□□□ -1.94
OTU1YFL044C QCR7P00128 127 aa2.95□□□□□ -1.94
OTU1YFL044C YHR212W-AP0CX91 67 aa2.95□□□□□ -1.94
OTU1YFL044C RNA14P25298 677 aaKnown RBP2.95□□□□□ -1.94
OTU1YFL044C ARO7P32178 256 aa2.95□□□□□ -1.94
OTU1YFL044C DOA4P32571 926 aa2.95□□□□□ -1.94
OTU1YFL044C UTR5P32630 166 aa2.95□□□□□ -1.94
OTU1YFL044C TIR2P33890 251 aa2.95□□□□□ -1.94
OTU1YFL044C YKL162CP36052 402 aa2.95□□□□□ -1.94
OTU1YFL044C PAU24P38155 120 aa2.95□□□□□ -1.94
OTU1YFL044C YHK8P38776 514 aa2.95□□□□□ -1.94
OTU1YFL044C PRM5P40476 318 aa2.95□□□□□ -1.94
OTU1YFL044C CDC40P40968 455 aaPredicted RBP2.95□□□□□ -1.94
OTU1YFL044C YJR056CP47115 236 aa2.95□□□□□ -1.94
OTU1YFL044C HSK3P69852 69 aa2.95□□□□□ -1.94
OTU1YFL044C SRL4Q03085 281 aa2.95□□□□□ -1.94
OTU1YFL044C RRP17Q04031 235 aaPredicted RBP2.95□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 29.2 ms