RNA–Protein interactions for RNA: YDR334W

SWR1, Transcript of Swi2/Snf2-related ATPase, yeastyeast

Gene SWR1, Length 4,545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWR1YDR334W ASP3-1P0CZ17 362 aa2.18□□□□□ -2.06
SWR1YDR334W YMC1P32331 307 aa2.18□□□□□ -2.06
SWR1YDR334W YCR041WP37265 110 aa2.18□□□□□ -2.06
SWR1YDR334W GGC1P38988 300 aa2.18□□□□□ -2.06
SWR1YDR334W AVT2P39981 480 aa2.18□□□□□ -2.06
SWR1YDR334W YER085CP40058 173 aa2.18□□□□□ -2.06
SWR1YDR334W SYS1P41544 203 aa2.18□□□□□ -2.06
SWR1YDR334W ATG27P46989 271 aa2.18□□□□□ -2.06
SWR1YDR334W FMP33P46998 180 aa2.18□□□□□ -2.06
SWR1YDR334W HMS2P47175 358 aa2.18□□□□□ -2.06
SWR1YDR334W BAT2P47176 376 aaKnown RBP2.18□□□□□ -2.06
SWR1YDR334W YGL088WP53151 121 aa2.18□□□□□ -2.06
SWR1YDR334W PET191Q02772 108 aa2.18□□□□□ -2.06
SWR1YDR334W BNA7Q04066 261 aa2.18□□□□□ -2.06
SWR1YDR334W YET2Q04210 160 aa2.18□□□□□ -2.06
SWR1YDR334W YPR078CQ06813 372 aa2.18□□□□□ -2.06
SWR1YDR334W YCL012CQ8J0M4 134 aa2.18□□□□□ -2.06
SWR1YDR334W FUN19P28003 413 aaPredicted RBP2.17□□□□□ -2.06
SWR1YDR334W YBR144CP34215 104 aa2.17□□□□□ -2.06
SWR1YDR334W CSH1P38287 376 aa2.17□□□□□ -2.06
SWR1YDR334W SSH1P38353 490 aaKnown RBP2.17□□□□□ -2.06
SWR1YDR334W HEM14P40012 539 aa2.17□□□□□ -2.06
SWR1YDR334W FAU1P40099 211 aa2.17□□□□□ -2.06
SWR1YDR334W BUD32P53323 261 aa2.17□□□□□ -2.06
SWR1YDR334W YPL039WQ03080 316 aa2.17□□□□□ -2.06
SWR1YDR334W NCE102Q12207 173 aaRIP-Chip data2.17□□□□□ -2.06not detected
SWR1YDR334W SIR2P06700 562 aa2.17□□□□□ -2.06
SWR1YDR334W ERD2P18414 219 aa2.17□□□□□ -2.06
SWR1YDR334W YKT6P36015 200 aaKnown RBP2.17□□□□□ -2.06
SWR1YDR334W PRS4P38063 326 aaPredicted RBP2.17□□□□□ -2.06
SWR1YDR334W AVT5P38176 459 aa2.17□□□□□ -2.06
SWR1YDR334W ERV15P38312 142 aa2.17□□□□□ -2.06
SWR1YDR334W PFS2P42841 465 aaKnown RBP2.17□□□□□ -2.06
SWR1YDR334W YDL218WQ07629 317 aa2.17□□□□□ -2.06
SWR1YDR334W MPD1Q12404 318 aaKnown RBP2.17□□□□□ -2.06
SWR1YDR334W URA5P13298 226 aaKnown RBP2.17□□□□□ -2.06
SWR1YDR334W URA6P15700 204 aa2.17□□□□□ -2.06
SWR1YDR334W NUP1P20676 1076 aa2.17□□□□□ -2.06
SWR1YDR334W MTR2P34232 184 aaKnown RBP2.17□□□□□ -2.06
SWR1YDR334W ECM13P38195 257 aa2.17□□□□□ -2.06
SWR1YDR334W DIA3P52290 468 aa2.17□□□□□ -2.06
SWR1YDR334W YGL149WP53116 101 aa2.17□□□□□ -2.06
SWR1YDR334W CRH1P53301 507 aa2.17□□□□□ -2.06
SWR1YDR334W RSM23Q01163 450 aa2.17□□□□□ -2.06
SWR1YDR334W CGI121Q03705 181 aaKnown RBP2.17□□□□□ -2.06
SWR1YDR334W SUT2Q12286 268 aa2.17□□□□□ -2.06
SWR1YDR334W PCC1Q3E833 88 aa2.17□□□□□ -2.06
SWR1YDR334W ADH2P00331 348 aaKnown RBP2.16□□□□□ -2.06
SWR1YDR334W HAP2P06774 265 aa2.16□□□□□ -2.06
SWR1YDR334W HSP26P15992 214 aaKnown RBP RIP-Chip data2.16□□□□□ -2.06not detected
SWR1YDR334W YBR285WP38354 144 aa2.16□□□□□ -2.06
SWR1YDR334W TRR2P38816 342 aa2.16□□□□□ -2.06
SWR1YDR334W YPL073CP40323 161 aa2.16□□□□□ -2.06
SWR1YDR334W VHS2P40463 436 aa2.16□□□□□ -2.06
SWR1YDR334W SGF73P53165 657 aa2.16□□□□□ -2.06
SWR1YDR334W API2Q04413 109 aa2.16□□□□□ -2.06
SWR1YDR334W ARR1Q06596 294 aa2.16□□□□□ -2.06
SWR1YDR334W WTM1Q12363 437 aaKnown RBP2.16□□□□□ -2.06
SWR1YDR334W PRM7Q12459 698 aa2.16□□□□□ -2.06
SWR1YDR334W AIM45Q12480 344 aaKnown RBP2.16□□□□□ -2.06
SWR1YDR334W MRPL44P19956 98 aa2.16□□□□□ -2.06
SWR1YDR334W UTR1P21373 530 aa2.16□□□□□ -2.06
SWR1YDR334W RFA2P26754 273 aaKnown RBP2.16□□□□□ -2.06
SWR1YDR334W SFK1P35735 353 aa2.16□□□□□ -2.06
SWR1YDR334W GAT2P40209 560 aa2.16□□□□□ -2.06
SWR1YDR334W RPL33BP41056 107 aaKnown RBP2.16□□□□□ -2.06
SWR1YDR334W TTI2P47168 421 aa2.16□□□□□ -2.06
SWR1YDR334W KNH1P50112 268 aa2.16□□□□□ -2.06
SWR1YDR334W YMR321CQ04898 105 aa2.16□□□□□ -2.06
SWR1YDR334W YOR186WQ08560 144 aa2.16□□□□□ -2.06
SWR1YDR334W RFM1Q12192 310 aa2.16□□□□□ -2.06
SWR1YDR334W TIR4Q12218 487 aaPredicted RBP2.16□□□□□ -2.06
SWR1YDR334W FMP16Q12497 93 aa2.16□□□□□ -2.06
SWR1YDR334W ATG40Q99325 256 aa2.16□□□□□ -2.06
SWR1YDR334W CDC28P00546 298 aaKnown RBP2.16□□□□□ -2.06
SWR1YDR334W SUC2P00724 532 aa2.16□□□□□ -2.06
SWR1YDR334W AQY1P0CD91 305 aa2.16□□□□□ -2.06
SWR1YDR334W YAP1P19880 650 aaKnown RBP2.16□□□□□ -2.06
SWR1YDR334W MRPL28P36527 147 aa2.16□□□□□ -2.06
SWR1YDR334W YPC1P38298 316 aa2.16□□□□□ -2.06
SWR1YDR334W VRG4P40107 337 aa2.16□□□□□ -2.06
SWR1YDR334W BTT1P40314 149 aaPredicted RBP2.16□□□□□ -2.06
SWR1YDR334W OST2P46964 130 aa2.16□□□□□ -2.06
SWR1YDR334W YJL043WP47053 257 aa2.16□□□□□ -2.06
SWR1YDR334W RAV2Q03956 351 aa2.16□□□□□ -2.06
SWR1YDR334W YMR130WQ04223 302 aa2.16□□□□□ -2.06
SWR1YDR334W TAZ1Q06510 381 aa2.16□□□□□ -2.06
SWR1YDR334W CRC1Q12289 327 aa2.16□□□□□ -2.06
SWR1YDR334W VPS63O13549 108 aa2.16□□□□□ -2.06
SWR1YDR334W RPL36BO14455 100 aaKnown RBP2.16□□□□□ -2.06
SWR1YDR334W ADH1P00330 348 aaKnown RBP2.16□□□□□ -2.06
SWR1YDR334W RPL36AP05745 100 aaPredicted RBP2.16□□□□□ -2.06
SWR1YDR334W PHO80P20052 293 aa2.16□□□□□ -2.06
SWR1YDR334W SEF1P34228 1148 aa2.16□□□□□ -2.06
SWR1YDR334W YKL071WP36086 256 aa2.16□□□□□ -2.06
SWR1YDR334W SRL3P36167 246 aa2.16□□□□□ -2.06
SWR1YDR334W RMD6P39975 231 aa2.16□□□□□ -2.06
SWR1YDR334W YIP1P53039 248 aa2.16□□□□□ -2.06
SWR1YDR334W MGA1P53050 456 aa2.16□□□□□ -2.06
SWR1YDR334W YMR254CQ04838 102 aa2.16□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 96.1 ms