RNA–Protein interactions for RNA: YOR290C

SNF2, Transcript of Catalytic subunit of the SWI/SNF chromatin remodeling complex, yeast

Gene SNF2, Length 5,112 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNF2	YOR290C	GDT1	P38301	280 aa	Predicted RBP	4.59	□□□□□ -1.67
SNF2	YOR290C	CCL1	P37366	393 aa		4.59	□□□□□ -1.67
SNF2	YOR290C	RPG1	P38249	964 aa	Known RBP	4.59	□□□□□ -1.67
SNF2	YOR290C	REI1	P38344	393 aa	Predicted RBP	4.59	□□□□□ -1.67
SNF2	YOR290C	KRE33	P53914	1056 aa	Known RBP	4.59	□□□□□ -1.67
SNF2	YOR290C	NDL1	Q06568	189 aa		4.59	□□□□□ -1.67
SNF2	YOR290C	YPD1	Q07688	167 aa		4.59	□□□□□ -1.67
SNF2	YOR290C	SPT7	P35177	1332 aa		4.59	□□□□□ -1.67
SNF2	YOR290C	OPY2	Q06810	360 aa		4.59	□□□□□ -1.67
SNF2	YOR290C	TIF4632	P39936	914 aa	Known RBP	4.59	□□□□□ -1.68
SNF2	YOR290C	HSP104	P31539	908 aa	Known RBP	4.59	□□□□□ -1.68
SNF2	YOR290C	TFC1	P32367	649 aa		4.59	□□□□□ -1.68
SNF2	YOR290C	DID4	P36108	232 aa		4.59	□□□□□ -1.68
SNF2	YOR290C	TIM54	P47045	478 aa		4.59	□□□□□ -1.68
SNF2	YOR290C	PSD2	P53037	1138 aa	Known RBP	4.59	□□□□□ -1.68
SNF2	YOR290C	RRI2	Q12348	645 aa		4.59	□□□□□ -1.68
SNF2	YOR290C	ABP1	P15891	592 aa	Known RBP	4.58	□□□□□ -1.68
SNF2	YOR290C	MSH1	P25846	959 aa		4.58	□□□□□ -1.68
SNF2	YOR290C	YMR111C	Q04461	462 aa	Predicted RBP	4.58	□□□□□ -1.68
SNF2	YOR290C	CDC3	P32457	520 aa	Known RBP	4.58	□□□□□ -1.68
SNF2	YOR290C	GCD11	P32481	527 aa	Known RBP	4.58	□□□□□ -1.68
SNF2	YOR290C	RPT3	P33298	428 aa	Known RBP	4.58	□□□□□ -1.68
SNF2	YOR290C	ASE1	P50275	885 aa		4.58	□□□□□ -1.68
SNF2	YOR290C	GIR2	Q03768	265 aa	Predicted RBP	4.58	□□□□□ -1.68
SNF2	YOR290C	ATG11	Q12527	1178 aa		4.58	□□□□□ -1.68
SNF2	YOR290C	MEI5	P32489	222 aa		4.58	□□□□□ -1.68
SNF2	YOR290C	RAD54	P32863	898 aa		4.58	□□□□□ -1.68
SNF2	YOR290C	RRP1	P35178	278 aa	Predicted RBP	4.58	□□□□□ -1.68
SNF2	YOR290C	TY4A-H	Q6Q5P6	413 aa		4.58	□□□□□ -1.68
SNF2	YOR290C	HOP2	P53187	214 aa		4.58	□□□□□ -1.68
SNF2	YOR290C	RPN5	Q12250	445 aa	Known RBP	4.58	□□□□□ -1.68
SNF2	YOR290C	TY4B-H	P0C2J7	1802 aa		4.57	□□□□□ -1.68
SNF2	YOR290C	DUR1,2	P32528	1835 aa	Known RBP	4.57	□□□□□ -1.68
SNF2	YOR290C	YAP5	P40574	245 aa		4.57	□□□□□ -1.68
SNF2	YOR290C	ETT1	Q08421	412 aa	Known RBP	4.57	□□□□□ -1.68
SNF2	YOR290C	SPT8	P38915	602 aa		4.57	□□□□□ -1.68
SNF2	YOR290C	GCN20	P43535	752 aa	Known RBP	4.57	□□□□□ -1.68
SNF2	YOR290C	ERB1	Q04660	807 aa	Known RBP	4.57	□□□□□ -1.68
SNF2	YOR290C	SES1	P07284	462 aa	Known RBP	4.57	□□□□□ -1.68
SNF2	YOR290C	PET123	P17558	318 aa		4.57	□□□□□ -1.68
SNF2	YOR290C	VPS24	P36095	224 aa	Known RBP	4.57	□□□□□ -1.68
SNF2	YOR290C	VPS30	Q02948	557 aa		4.57	□□□□□ -1.68
SNF2	YOR290C	SUI3	P09064	285 aa	Known RBP	4.56	□□□□□ -1.68
SNF2	YOR290C	UBP1	P25037	809 aa		4.56	□□□□□ -1.68
SNF2	YOR290C	RTT105	P40063	208 aa		4.56	□□□□□ -1.68
SNF2	YOR290C	IQG1	Q12280	1495 aa		4.56	□□□□□ -1.68
SNF2	YOR290C	RGA1	P39083	1007 aa		4.56	□□□□□ -1.68
SNF2	YOR290C	MAD1	P40957	749 aa		4.56	□□□□□ -1.68
SNF2	YOR290C	SET1	P38827	1080 aa	Known RBP	4.56	□□□□□ -1.68
SNF2	YOR290C	FYV8	P46949	817 aa	Known RBP	4.56	□□□□□ -1.68
SNF2	YOR290C	BBC1	P47068	1157 aa		4.56	□□□□□ -1.68
SNF2	YOR290C	BRO1	P48582	844 aa		4.56	□□□□□ -1.68
SNF2	YOR290C	BUD21	Q08492	214 aa	Predicted RBP	4.56	□□□□□ -1.68
SNF2	YOR290C	SNU66	Q12420	587 aa	Predicted RBP	4.56	□□□□□ -1.68
SNF2	YOR290C	TPD3	P31383	635 aa		4.55	□□□□□ -1.68
SNF2	YOR290C	SAP190	P36123	1033 aa		4.55	□□□□□ -1.68
SNF2	YOR290C	RRM3	P38766	723 aa		4.55	□□□□□ -1.68
SNF2	YOR290C	RPN11	P43588	306 aa	Known RBP	4.55	□□□□□ -1.68
SNF2	YOR290C	RSC8	P43609	557 aa	Known RBP	4.55	□□□□□ -1.68
SNF2	YOR290C	SAM37	P50110	327 aa		4.55	□□□□□ -1.68
SNF2	YOR290C	DSL1	P53847	754 aa		4.55	□□□□□ -1.68
SNF2	YOR290C	SPC72	P39723	622 aa		4.55	□□□□□ -1.68
SNF2	YOR290C	LOH1	P47055	219 aa		4.55	□□□□□ -1.68
SNF2	YOR290C	HCR1	Q05775	265 aa	Known RBP	4.55	□□□□□ -1.68
SNF2	YOR290C	ENT2	Q05785	613 aa		4.55	□□□□□ -1.68
SNF2	YOR290C	PEX5	P35056	612 aa		4.55	□□□□□ -1.68
SNF2	YOR290C	SUM1	P46676	1062 aa		4.55	□□□□□ -1.68
SNF2	YOR290C	PMT3	P47190	753 aa		4.55	□□□□□ -1.68
SNF2	YOR290C	KEL3	Q08979	651 aa	Predicted RBP	4.55	□□□□□ -1.68
SNF2	YOR290C	RPN2	P32565	945 aa	Known RBP	4.54	□□□□□ -1.68
SNF2	YOR290C	ALK1	P43633	760 aa	Known RBP	4.54	□□□□□ -1.68
SNF2	YOR290C	NOP15	P53927	220 aa	Predicted RBP	4.54	□□□□□ -1.68
SNF2	YOR290C	SSO2	P39926	295 aa		4.54	□□□□□ -1.68
SNF2	YOR290C	BET4	Q00618	327 aa		4.54	□□□□□ -1.68
SNF2	YOR290C	RNT1	Q02555	471 aa		4.54	□□□□□ -1.68
SNF2	YOR290C	TY4B-J	P47024	1803 aa		4.54	□□□□□ -1.68
SNF2	YOR290C	SAP1	P39955	897 aa	Known RBP	4.54	□□□□□ -1.68
SNF2	YOR290C	SXM1	Q04175	944 aa	Known RBP	4.54	□□□□□ -1.68
SNF2	YOR290C	YPL191C	Q08930	360 aa		4.54	□□□□□ -1.68
SNF2	YOR290C	SRO9	P25567	434 aa	Known RBP	4.54	□□□□□ -1.68
SNF2	YOR290C	RTS1	P38903	757 aa		4.54	□□□□□ -1.68
SNF2	YOR290C	HPC2	Q01448	625 aa		4.54	□□□□□ -1.68
SNF2	YOR290C	MRE11	P32829	692 aa		4.53	□□□□□ -1.68
SNF2	YOR290C	YJL070C	P40361	888 aa		4.53	□□□□□ -1.68
SNF2	YOR290C	SDA1	P53313	767 aa	Known RBP	4.53	□□□□□ -1.68
SNF2	YOR290C	NOC3	Q07896	663 aa	Predicted RBP	4.53	□□□□□ -1.68
SNF2	YOR290C	LSP1	Q12230	341 aa	Known RBP	4.53	□□□□□ -1.68
SNF2	YOR290C	KGD2	P19262	463 aa	Predicted RBP	4.53	□□□□□ -1.68
SNF2	YOR290C	PEP7	P32609	515 aa		4.53	□□□□□ -1.68
SNF2	YOR290C	NAN1	Q02931	896 aa	Known RBP	4.53	□□□□□ -1.68
SNF2	YOR290C	RPN7	Q06103	429 aa	Known RBP	4.53	□□□□□ -1.68
SNF2	YOR290C	WHI2	P12611	486 aa		4.53	□□□□□ -1.68
SNF2	YOR290C	HSP78	P33416	811 aa		4.53	□□□□□ -1.68
SNF2	YOR290C	VID28	P40547	921 aa		4.53	□□□□□ -1.68
SNF2	YOR290C	UFD2	P54860	961 aa		4.53	□□□□□ -1.68
SNF2	YOR290C	YMR226C	Q05016	267 aa	Known RBP	4.53	□□□□□ -1.68
SNF2	YOR290C	RKM4	Q12504	494 aa		4.53	□□□□□ -1.68
SNF2	YOR290C	LSO1	Q3E827	93 aa		4.53	□□□□□ -1.68
SNF2	YOR290C	PDR11	P40550	1411 aa		4.53	□□□□□ -1.68
SNF2	YOR290C	SWH1	P35845	1188 aa		4.53	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 96.9 ms