RNA–Protein interactions for RNA: YOL148C

SPT20, Transcript of Subunit of the SAGA transcriptional regulatory complex, yeastyeast

Gene SPT20, Length 1,815 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT20YOL148C RPL19AP0CX82 189 aaKnown RBP10.91□□□□□ -0.66
SPT20YOL148C RPL19BP0CX83 189 aaPredicted RBP10.91□□□□□ -0.66
SPT20YOL148C BMS1Q08965 1183 aaKnown RBP10.91□□□□□ -0.66
SPT20YOL148C ATE1P16639 503 aa10.91□□□□□ -0.66
SPT20YOL148C PRP31P49704 494 aaPredicted RBP10.91□□□□□ -0.66
SPT20YOL148C MSB4Q12317 492 aa10.91□□□□□ -0.66
SPT20YOL148C PET111P08468 800 aa10.9□□□□□ -0.66
SPT20YOL148C PPH3P32345 308 aa10.9□□□□□ -0.66
SPT20YOL148C AKL1P38080 1108 aaKnown RBP10.9□□□□□ -0.66
SPT20YOL148C VPS41P38959 992 aa10.9□□□□□ -0.66
SPT20YOL148C JSN1P47135 1091 aaKnown RBP RIP-Chip data10.9□□□□□ -0.66not detected
SPT20YOL148C DEF1P35732 738 aaKnown RBP10.89□□□□□ -0.67
SPT20YOL148C MSH4P40965 878 aaPredicted RBP10.89□□□□□ -0.67
SPT20YOL148C PRP3Q03338 469 aaPredicted RBP10.89□□□□□ -0.67
SPT20YOL148C GIN4Q12263 1142 aa10.89□□□□□ -0.67
SPT20YOL148C TRS33Q99394 268 aa10.89□□□□□ -0.67
SPT20YOL148C MTR4P47047 1073 aaKnown RBP10.88□□□□□ -0.67
SPT20YOL148C YMR102CQ03177 834 aa10.88□□□□□ -0.67
SPT20YOL148C FRS2P15625 503 aaKnown RBP10.88□□□□□ -0.67
SPT20YOL148C MSH1P25846 959 aa10.88□□□□□ -0.67
SPT20YOL148C PRX1P34227 261 aaKnown RBP10.88□□□□□ -0.67
SPT20YOL148C SGD1Q06132 899 aa10.88□□□□□ -0.67
SPT20YOL148C BUB1P41695 1021 aaKnown RBP RIP-Chip data10.87□□□□□ -0.67not detected
SPT20YOL148C BDP1P46678 594 aa10.87□□□□□ -0.67
SPT20YOL148C TLG2Q08144 397 aa10.87□□□□□ -0.67
SPT20YOL148C DUR1,2P32528 1835 aaKnown RBP10.87□□□□□ -0.67
SPT20YOL148C YBR287WP38355 427 aa10.86□□□□□ -0.67
SPT20YOL148C YKL068W-AQ3E826 78 aa10.86□□□□□ -0.67
SPT20YOL148C GCD7P32502 381 aaPredicted RBP10.86□□□□□ -0.67
SPT20YOL148C TTI1P36097 1038 aa10.86□□□□□ -0.67
SPT20YOL148C COG4Q06096 861 aa10.86□□□□□ -0.67
SPT20YOL148C RPN7Q06103 429 aaKnown RBP10.86□□□□□ -0.67
SPT20YOL148C GDT1P38301 280 aaPredicted RBP10.85□□□□□ -0.67
SPT20YOL148C NOP8Q08287 484 aaPredicted RBP10.85□□□□□ -0.67
SPT20YOL148C SIC1P38634 284 aa10.84□□□□□ -0.67
SPT20YOL148C CTH1P47976 325 aa10.84□□□□□ -0.67
SPT20YOL148C YGL082WP53155 381 aa10.84□□□□□ -0.67
SPT20YOL148C GAS4Q08271 471 aa10.84□□□□□ -0.67
SPT20YOL148C APC1P53886 1748 aa10.83□□□□□ -0.68
SPT20YOL148C MBR1P23493 339 aa10.83□□□□□ -0.68
SPT20YOL148C DDP1Q99321 188 aaKnown RBP10.83□□□□□ -0.68
SPT20YOL148C TPM1P17536 199 aaKnown RBP10.82□□□□□ -0.68
SPT20YOL148C SRP54P20424 541 aaKnown RBP10.81□□□□□ -0.68
SPT20YOL148C MSH3P25336 1018 aa10.81□□□□□ -0.68
SPT20YOL148C HSP104P31539 908 aaKnown RBP10.81□□□□□ -0.68
SPT20YOL148C HGH1P48362 394 aaKnown RBP10.81□□□□□ -0.68
SPT20YOL148C NTH2P35172 780 aa10.81□□□□□ -0.68
SPT20YOL148C MVP1P40959 511 aaKnown RBP10.81□□□□□ -0.68
SPT20YOL148C RIA1P53893 1110 aa10.81□□□□□ -0.68
SPT20YOL148C RAD24P32641 659 aa10.79□□□□□ -0.68
SPT20YOL148C BYE1P36106 594 aa10.79□□□□□ -0.68
SPT20YOL148C RRM3P38766 723 aa10.79□□□□□ -0.68
SPT20YOL148C AIM9P40053 627 aaKnown RBP10.79□□□□□ -0.68
SPT20YOL148C TFG2P41896 400 aaPredicted RBP10.79□□□□□ -0.68
SPT20YOL148C PSH1Q12161 406 aa10.79□□□□□ -0.68
SPT20YOL148C BBC1P47068 1157 aa10.79□□□□□ -0.68
SPT20YOL148C CTF18P49956 741 aa10.79□□□□□ -0.68
SPT20YOL148C UBP10P53874 792 aaPredicted RBP10.79□□□□□ -0.68
SPT20YOL148C SRC1Q03707 834 aa10.78□□□□□ -0.68
SPT20YOL148C DPS1P04802 557 aaKnown RBP10.77□□□□□ -0.68
SPT20YOL148C SWI3P32591 825 aa10.77□□□□□ -0.68
SPT20YOL148C SWH1P35845 1188 aa10.77□□□□□ -0.68
SPT20YOL148C AAP1P37898 856 aaKnown RBP10.77□□□□□ -0.68
SPT20YOL148C OSW7P43611 510 aa10.77□□□□□ -0.68
SPT20YOL148C GYL1Q04322 720 aa10.77□□□□□ -0.68
SPT20YOL148C RIM20Q12033 661 aa10.77□□□□□ -0.68
SPT20YOL148C COQ4O13525 335 aa10.77□□□□□ -0.69
SPT20YOL148C SPT2P06843 333 aaPredicted RBP10.77□□□□□ -0.69
SPT20YOL148C PET123P17558 318 aa10.77□□□□□ -0.69
SPT20YOL148C SLD2P34252 453 aa10.77□□□□□ -0.69
SPT20YOL148C ARP5P53946 755 aa10.77□□□□□ -0.69
SPT20YOL148C CPA2P03965 1118 aaKnown RBP10.76□□□□□ -0.69
SPT20YOL148C GPA1P08539 472 aa10.76□□□□□ -0.69
SPT20YOL148C STE11P23561 717 aa10.76□□□□□ -0.69
SPT20YOL148C RDS1P25611 832 aa10.76□□□□□ -0.69
SPT20YOL148C PSE1P32337 1089 aaKnown RBP10.76□□□□□ -0.69
SPT20YOL148C TSR3Q12094 313 aaKnown RBP10.76□□□□□ -0.69
SPT20YOL148C CPS1P27614 576 aa10.75□□□□□ -0.69
SPT20YOL148C SPO22P40511 975 aa10.75□□□□□ -0.69
SPT20YOL148C VPS72Q03388 795 aa10.75□□□□□ -0.69
SPT20YOL148C YCG1Q06680 1035 aa10.75□□□□□ -0.69
SPT20YOL148C RPS24AP0CX31 135 aaKnown RBP10.74□□□□□ -0.69
SPT20YOL148C RPS24BP0CX32 135 aaKnown RBP10.74□□□□□ -0.69
SPT20YOL148C RRP1P35178 278 aaPredicted RBP10.74□□□□□ -0.69
SPT20YOL148C YER130CP39959 443 aa10.74□□□□□ -0.69
SPT20YOL148C YGR122WP53272 402 aa10.74□□□□□ -0.69
SPT20YOL148C RBA50Q04418 439 aa10.74□□□□□ -0.69
SPT20YOL148C PSK2Q08217 1101 aa10.74□□□□□ -0.69
SPT20YOL148C ELG1Q12050 791 aa10.74□□□□□ -0.69
SPT20YOL148C RIM101P33400 625 aa10.74□□□□□ -0.69
SPT20YOL148C RMD1Q03441 430 aa10.74□□□□□ -0.69
SPT20YOL148C SWI1P09547 1314 aa10.74□□□□□ -0.69
SPT20YOL148C TY1B-NL2Q99337 1749 aaKnown RBP10.74□□□□□ -0.69
SPT20YOL148C BOI2P39969 1040 aa10.73□□□□□ -0.69
SPT20YOL148C WAR1Q03631 944 aa10.73□□□□□ -0.69
SPT20YOL148C YPL150WQ12152 901 aa10.73□□□□□ -0.69
SPT20YOL148C ADE6P38972 1358 aaKnown RBP10.73□□□□□ -0.69
SPT20YOL148C ENT3P47160 408 aa10.72□□□□□ -0.69
SPT20YOL148C RRB1Q04225 511 aaKnown RBP10.72□□□□□ -0.69
SPT20YOL148C BRE1Q07457 700 aaKnown RBP10.72□□□□□ -0.69
Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms