RNA–Protein interactions for RNA: YOL112W

MSB4, Transcript of GTPase-activating protein of the Ras superfamily, yeast

Gene MSB4, Length 1,479 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSB4	YOL112W	YER156C	P40093	338 aa	Known RBP	11.89	□□□□□ -0.51
MSB4	YOL112W	HAT1	Q12341	374 aa		11.89	□□□□□ -0.51
MSB4	YOL112W	SWC3	P31376	625 aa		11.88	□□□□□ -0.51
MSB4	YOL112W	RAD24	P32641	659 aa		11.88	□□□□□ -0.51
MSB4	YOL112W	MAK21	Q12176	1025 aa	Known RBP	11.88	□□□□□ -0.51
MSB4	YOL112W	YIL092W	P40497	633 aa		11.87	□□□□□ -0.51
MSB4	YOL112W	YRB30	P53107	440 aa	Predicted RBP	11.87	□□□□□ -0.51
MSB4	YOL112W	IRC3	Q06683	689 aa		11.87	□□□□□ -0.51
MSB4	YOL112W	DIB1	Q06819	143 aa	Predicted RBP	11.87	□□□□□ -0.51
MSB4	YOL112W	DAL5	P15365	543 aa		11.86	□□□□□ -0.51
MSB4	YOL112W	FUN12	P39730	1002 aa	Known RBP	11.86	□□□□□ -0.51
MSB4	YOL112W	YPP1	P46951	817 aa		11.86	□□□□□ -0.51
MSB4	YOL112W	CSI1	Q04368	295 aa		11.86	□□□□□ -0.51
MSB4	YOL112W	UBP16	Q02863	499 aa		11.85	□□□□□ -0.51
MSB4	YOL112W	HKR1	P41809	1802 aa		11.84	□□□□□ -0.51
MSB4	YOL112W	ERO1	Q03103	563 aa		11.84	□□□□□ -0.51
MSB4	YOL112W	SET1	P38827	1080 aa	Known RBP	11.83	□□□□□ -0.52
MSB4	YOL112W	NOP8	Q08287	484 aa	Predicted RBP	11.83	□□□□□ -0.52
MSB4	YOL112W	FAS2	P19097	1887 aa	Known RBP	11.82	□□□□□ -0.52
MSB4	YOL112W	SIT4	P20604	311 aa		11.82	□□□□□ -0.52
MSB4	YOL112W	ITC1	P53125	1264 aa		11.82	□□□□□ -0.52
MSB4	YOL112W	SYF1	Q04048	859 aa	Predicted RBP	11.82	□□□□□ -0.52
MSB4	YOL112W	FRD1	P32614	470 aa	Known RBP	11.81	□□□□□ -0.52
MSB4	YOL112W	RPN1	P38764	993 aa	Known RBP	11.8	□□□□□ -0.52
MSB4	YOL112W	BOI2	P39969	1040 aa		11.8	□□□□□ -0.52
MSB4	YOL112W	HXT10	P43581	546 aa		11.8	□□□□□ -0.52
MSB4	YOL112W	PSH1	Q12161	406 aa		11.8	□□□□□ -0.52
MSB4	YOL112W	RPS19A	P07280	144 aa	Known RBP	11.79	□□□□□ -0.52
MSB4	YOL112W	RPS19B	P07281	144 aa	Predicted RBP	11.79	□□□□□ -0.52
MSB4	YOL112W	SAS4	Q04003	481 aa		11.79	□□□□□ -0.52
MSB4	YOL112W	DUR1,2	P32528	1835 aa	Known RBP	11.79	□□□□□ -0.52
MSB4	YOL112W	TRP5	P00931	707 aa	Known RBP	11.78	□□□□□ -0.52
MSB4	YOL112W	ICL1	P28240	557 aa	Predicted RBP	11.78	□□□□□ -0.52
MSB4	YOL112W	UBP12	P39538	1254 aa		11.78	□□□□□ -0.52
MSB4	YOL112W	SQS1	P53866	767 aa	Known RBP	11.78	□□□□□ -0.52
MSB4	YOL112W	RAD2	P07276	1031 aa		11.77	□□□□□ -0.52
MSB4	YOL112W	SAC3	P46674	1301 aa		11.77	□□□□□ -0.53
MSB4	YOL112W	TOP1	P04786	769 aa		11.76	□□□□□ -0.53
MSB4	YOL112W	ILV3	P39522	585 aa	Known RBP	11.75	□□□□□ -0.53
MSB4	YOL112W	MTC5	Q03897	1148 aa		11.74	□□□□□ -0.53
MSB4	YOL112W	YKU70	P32807	602 aa		11.73	□□□□□ -0.53
MSB4	YOL112W	GRX6	Q12438	231 aa		11.73	□□□□□ -0.53
MSB4	YOL112W	RET1	P22276	1149 aa	Known RBP	11.72	□□□□□ -0.53
MSB4	YOL112W	YNG2	P38806	282 aa	Known RBP	11.72	□□□□□ -0.53
MSB4	YOL112W	ICP55	P40051	511 aa		11.72	□□□□□ -0.53
MSB4	YOL112W	SPO1	P53541	631 aa		11.72	□□□□□ -0.53
MSB4	YOL112W	DPH6	Q12429	685 aa		11.72	□□□□□ -0.53
MSB4	YOL112W	FIG2	P25653	1609 aa		11.71	□□□□□ -0.53
MSB4	YOL112W	NGR1	P32831	672 aa	Known RBP	11.71	□□□□□ -0.53
MSB4	YOL112W	SET4	P42948	560 aa		11.71	□□□□□ -0.53
MSB4	YOL112W	THI3	Q07471	609 aa		11.7	□□□□□ -0.54
MSB4	YOL112W	MGM1	P32266	881 aa		11.7	□□□□□ -0.54
MSB4	YOL112W	SPL2	P38839	148 aa		11.7	□□□□□ -0.54
MSB4	YOL112W	POL32	P47110	350 aa		11.7	□□□□□ -0.54
MSB4	YOL112W	KRE2	P27809	442 aa		11.69	□□□□□ -0.54
MSB4	YOL112W	SLA1	P32790	1244 aa		11.69	□□□□□ -0.54
MSB4	YOL112W	SHC1	P39000	512 aa		11.69	□□□□□ -0.54
MSB4	YOL112W	RPT4	P53549	437 aa	Known RBP	11.69	□□□□□ -0.54
MSB4	YOL112W	PUF6	Q04373	656 aa	Known RBP	11.69	□□□□□ -0.54
MSB4	YOL112W	DIP2	Q12220	943 aa	Predicted RBP	11.69	□□□□□ -0.54
MSB4	YOL112W	FPK1	P53739	893 aa		11.68	□□□□□ -0.54
MSB4	YOL112W	ATG20	Q07528	640 aa		11.68	□□□□□ -0.54
MSB4	YOL112W	GCD7	P32502	381 aa	Predicted RBP	11.67	□□□□□ -0.54
MSB4	YOL112W	TFA1	P36100	482 aa		11.67	□□□□□ -0.54
MSB4	YOL112W	SNU66	Q12420	587 aa	Predicted RBP	11.67	□□□□□ -0.54
MSB4	YOL112W	SUP35	P05453	685 aa	Known RBP	11.66	□□□□□ -0.54
MSB4	YOL112W	DPL1	Q05567	589 aa		11.66	□□□□□ -0.54
MSB4	YOL112W	SLI15	P38283	698 aa		11.65	□□□□□ -0.54
MSB4	YOL112W	ADR1	P07248	1323 aa		11.65	□□□□□ -0.55
MSB4	YOL112W	GAS5	Q08193	484 aa		11.64	□□□□□ -0.55
MSB4	YOL112W	SRC1	Q03707	834 aa		11.63	□□□□□ -0.55
MSB4	YOL112W	RPS9B	P05755	195 aa	Known RBP	11.63	□□□□□ -0.55
MSB4	YOL112W	IRC4	Q03036	179 aa		11.62	□□□□□ -0.55
MSB4	YOL112W	POM152	P39685	1337 aa		11.61	□□□□□ -0.55
MSB4	YOL112W	AI2	P03876	854 aa		11.61	□□□□□ -0.55
MSB4	YOL112W	GAP1	P19145	602 aa	Predicted RBP	11.61	□□□□□ -0.55
MSB4	YOL112W	LCB1	P25045	558 aa	Known RBP	11.61	□□□□□ -0.55
MSB4	YOL112W	HGH1	P48362	394 aa	Known RBP	11.61	□□□□□ -0.55
MSB4	YOL112W	UBX2	Q04228	584 aa		11.61	□□□□□ -0.55
MSB4	YOL112W	TOS4	Q06266	489 aa		11.61	□□□□□ -0.55
MSB4	YOL112W	GYP5	Q12344	894 aa		11.61	□□□□□ -0.55
MSB4	YOL112W	THS1	P04801	734 aa	Known RBP	11.6	□□□□□ -0.55
MSB4	YOL112W	SEC18	P18759	758 aa	Known RBP	11.6	□□□□□ -0.55
MSB4	YOL112W	SSF1	P38789	453 aa	Predicted RBP	11.6	□□□□□ -0.55
MSB4	YOL112W	GSM1	P42950	618 aa		11.6	□□□□□ -0.55
MSB4	YOL112W	PUS5	Q06244	254 aa		11.59	□□□□□ -0.55
MSB4	YOL112W	FLO11	P08640	1367 aa		11.59	□□□□□ -0.55
MSB4	YOL112W	YLR278C	Q05854	1341 aa		11.59	□□□□□ -0.55
MSB4	YOL112W	TIF4632	P39936	914 aa	Known RBP	11.58	□□□□□ -0.56
MSB4	YOL112W	MSM1	P22438	575 aa		11.57	□□□□□ -0.56
MSB4	YOL112W	AFG2	P32794	780 aa		11.57	□□□□□ -0.56
MSB4	YOL112W	NMD2	P38798	1089 aa	Known RBP	11.57	□□□□□ -0.56
MSB4	YOL112W	YNL193W	P53870	558 aa		11.57	□□□□□ -0.56
MSB4	YOL112W	KTR3	P38130	404 aa	Predicted RBP	11.57	□□□□□ -0.56
MSB4	YOL112W	RPN7	Q06103	429 aa	Known RBP	11.57	□□□□□ -0.56
MSB4	YOL112W	RRG1	Q12167	365 aa	Predicted RBP	11.57	□□□□□ -0.56
MSB4	YOL112W	GSC2	P40989	1895 aa		11.56	□□□□□ -0.56
MSB4	YOL112W	STV1	P37296	890 aa		11.56	□□□□□ -0.56
MSB4	YOL112W	GLO3	P38682	493 aa	Known RBP	11.56	□□□□□ -0.56
MSB4	YOL112W	NUG1	P40010	520 aa	Known RBP	11.56	□□□□□ -0.56

Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms