RNA–Protein interactions for RNA: YNL304W

YPT11, Transcript of Rab GTPase, yeastyeast

Gene YPT11, Length 1,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT11YNL304W SPO1P53541 631 aa10.04□□□□□ -0.8
YPT11YNL304W RAT1Q02792 1006 aaKnown RBP10.04□□□□□ -0.8
YPT11YNL304W SWC3P31376 625 aa10.03□□□□□ -0.8
YPT11YNL304W CTH1P47976 325 aa10.03□□□□□ -0.8
YPT11YNL304W HGH1P48362 394 aaKnown RBP10.03□□□□□ -0.8
YPT11YNL304W DIB1Q06819 143 aaPredicted RBP10.02□□□□□ -0.81
YPT11YNL304W CTI6Q08923 506 aa10.02□□□□□ -0.81
YPT11YNL304W NMD2P38798 1089 aaKnown RBP10.01□□□□□ -0.81
YPT11YNL304W UBP12P39538 1254 aa10.01□□□□□ -0.81
YPT11YNL304W ECM16Q04217 1267 aaKnown RBP10.01□□□□□ -0.81
YPT11YNL304W PSH1Q12161 406 aa10.01□□□□□ -0.81
YPT11YNL304W HAT1Q12341 374 aa10.01□□□□□ -0.81
YPT11YNL304W NCB2Q92317 146 aa10□□□□□ -0.81
YPT11YNL304W DCD1P06773 312 aa9.99□□□□□ -0.81
YPT11YNL304W SSF1P38789 453 aaPredicted RBP9.99□□□□□ -0.81
YPT11YNL304W SET1P38827 1080 aaKnown RBP9.99□□□□□ -0.81
YPT11YNL304W ITC1P53125 1264 aa9.99□□□□□ -0.81
YPT11YNL304W SSK22P25390 1331 aaPredicted RBP9.99□□□□□ -0.81
YPT11YNL304W TOS1P38288 455 aa9.98□□□□□ -0.81
YPT11YNL304W GCD7P32502 381 aaPredicted RBP9.97□□□□□ -0.81
YPT11YNL304W MTC5Q03897 1148 aa9.97□□□□□ -0.81
YPT11YNL304W IRC3Q06683 689 aa9.97□□□□□ -0.81
YPT11YNL304W SNU66Q12420 587 aaPredicted RBP9.97□□□□□ -0.81
YPT11YNL304W BDP1P46678 594 aa9.96□□□□□ -0.82
YPT11YNL304W FCP1Q03254 732 aa9.96□□□□□ -0.82
YPT11YNL304W BDF2Q07442 638 aa9.96□□□□□ -0.82
YPT11YNL304W RIX7Q07844 837 aaKnown RBP9.96□□□□□ -0.82
YPT11YNL304W ILV3P39522 585 aaKnown RBP9.94□□□□□ -0.82
YPT11YNL304W SAC3P46674 1301 aa9.93□□□□□ -0.82
YPT11YNL304W RFC1P38630 861 aaKnown RBP9.93□□□□□ -0.82
YPT11YNL304W MSN5P52918 1224 aa9.92□□□□□ -0.82
YPT11YNL304W RPC31P17890 251 aa9.91□□□□□ -0.82
YPT11YNL304W PFF1P38244 976 aa9.91□□□□□ -0.82
YPT11YNL304W SYF1Q04048 859 aaPredicted RBP9.91□□□□□ -0.82
YPT11YNL304W SAS4Q04003 481 aa9.9□□□□□ -0.82
YPT11YNL304W YKL222CP35995 705 aa9.89□□□□□ -0.83
YPT11YNL304W RPN1P38764 993 aaKnown RBP9.89□□□□□ -0.83
YPT11YNL304W NKP2Q06162 153 aa9.89□□□□□ -0.83
YPT11YNL304W PDR18P53756 1333 aa9.88□□□□□ -0.83
YPT11YNL304W GYP5Q12344 894 aa9.88□□□□□ -0.83
YPT11YNL304W DPH6Q12429 685 aa9.88□□□□□ -0.83
YPT11YNL304W RAD50P12753 1312 aa9.87□□□□□ -0.83
YPT11YNL304W SIT4P20604 311 aa9.87□□□□□ -0.83
YPT11YNL304W FRD1P32614 470 aaKnown RBP9.87□□□□□ -0.83
YPT11YNL304W MLC1P53141 149 aa9.87□□□□□ -0.83
YPT11YNL304W SRC1Q03707 834 aa9.87□□□□□ -0.83
YPT11YNL304W NGR1P32831 672 aaKnown RBP9.86□□□□□ -0.83
YPT11YNL304W HXT10P43581 546 aa9.86□□□□□ -0.83
YPT11YNL304W CTT1P06115 562 aa9.85□□□□□ -0.83
YPT11YNL304W ERO1Q03103 563 aa9.85□□□□□ -0.83
YPT11YNL304W RRI2Q12348 645 aa9.85□□□□□ -0.83
YPT11YNL304W CDC16P09798 840 aa9.84□□□□□ -0.83
YPT11YNL304W ECM21P38167 1117 aaKnown RBP9.84□□□□□ -0.83
YPT11YNL304W NUG1P40010 520 aaKnown RBP9.84□□□□□ -0.83
YPT11YNL304W CWH41P53008 833 aa9.84□□□□□ -0.83
YPT11YNL304W YGL242CP53066 181 aa9.84□□□□□ -0.83
YPT11YNL304W UBP16Q02863 499 aa9.84□□□□□ -0.83
YPT11YNL304W THI3Q07471 609 aa9.84□□□□□ -0.83
YPT11YNL304W NOT3P06102 836 aaKnown RBP9.83□□□□□ -0.84
YPT11YNL304W SEC18P18759 758 aaKnown RBP9.83□□□□□ -0.84
YPT11YNL304W SMY1P32364 656 aaKnown RBP9.83□□□□□ -0.84
YPT11YNL304W SLA1P32790 1244 aa9.83□□□□□ -0.84
YPT11YNL304W ERT1P38140 529 aa9.83□□□□□ -0.84
YPT11YNL304W EAF6P47128 113 aa9.83□□□□□ -0.84
YPT11YNL304W UBX2Q04228 584 aa9.83□□□□□ -0.84
YPT11YNL304W BRE1Q07457 700 aaKnown RBP9.83□□□□□ -0.84
YPT11YNL304W GRX6Q12438 231 aa9.83□□□□□ -0.84
YPT11YNL304W PIF1P07271 859 aa9.82□□□□□ -0.84
YPT11YNL304W VAS1P07806 1104 aaKnown RBP9.82□□□□□ -0.84
YPT11YNL304W CAF20P12962 161 aaKnown RBP9.82□□□□□ -0.84
YPT11YNL304W MGM1P32266 881 aa9.82□□□□□ -0.84
YPT11YNL304W ICP55P40051 511 aa9.82□□□□□ -0.84
YPT11YNL304W YER156CP40093 338 aaKnown RBP9.82□□□□□ -0.84
YPT11YNL304W ADR1P07248 1323 aa9.82□□□□□ -0.84
YPT11YNL304W PMD1P32634 1753 aa9.81□□□□□ -0.84
YPT11YNL304W POM152P39685 1337 aa9.81□□□□□ -0.84
YPT11YNL304W TIF4632P39936 914 aaKnown RBP9.8□□□□□ -0.84
YPT11YNL304W RMD1Q03441 430 aa9.8□□□□□ -0.84
YPT11YNL304W ENP2P48234 707 aaKnown RBP9.79□□□□□ -0.84
YPT11YNL304W YNL193WP53870 558 aa9.79□□□□□ -0.84
YPT11YNL304W KRE2P27809 442 aa9.78□□□□□ -0.84
YPT11YNL304W PBY1P38254 753 aa9.78□□□□□ -0.84
YPT11YNL304W RPT4P53549 437 aaKnown RBP9.78□□□□□ -0.84
YPT11YNL304W ALO1P54783 526 aaKnown RBP9.78□□□□□ -0.84
YPT11YNL304W FPR4Q06205 392 aaPredicted RBP9.78□□□□□ -0.84
YPT11YNL304W PSF3Q12146 194 aa9.78□□□□□ -0.84
YPT11YNL304W AI2P03876 854 aa9.77□□□□□ -0.85
YPT11YNL304W RPS9BP05755 195 aaKnown RBP9.77□□□□□ -0.85
YPT11YNL304W YKU70P32807 602 aa9.77□□□□□ -0.85
YPT11YNL304W OSH3P38713 996 aaKnown RBP9.77□□□□□ -0.85
YPT11YNL304W STM1P39015 273 aaKnown RBP9.77□□□□□ -0.85
YPT11YNL304W RPN7Q06103 429 aaKnown RBP9.77□□□□□ -0.85
YPT11YNL304W TPM1P17536 199 aaKnown RBP9.76□□□□□ -0.85
YPT11YNL304W KTR1P27810 393 aaKnown RBP9.75□□□□□ -0.85
YPT11YNL304W GCR2Q01722 534 aa9.75□□□□□ -0.85
YPT11YNL304W ICL1P28240 557 aaPredicted RBP9.74□□□□□ -0.85
YPT11YNL304W DLD1P32891 587 aa9.74□□□□□ -0.85
YPT11YNL304W KTR3P38130 404 aaPredicted RBP9.74□□□□□ -0.85
YPT11YNL304W BRN1P38170 754 aa9.74□□□□□ -0.85
YPT11YNL304W JJJ2P46997 583 aa9.74□□□□□ -0.85
Retrieved 100 of 5,963 RNA–protein pairs in 24.2 ms