RNA–Protein interactions for RNA: YNL293W

MSB3, Transcript of Rab GTPase-activating protein, yeastyeast

Gene MSB3, Length 1,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSB3YNL293W MRC1P25588 1096 aa8.02□□□□□ -1.13
MSB3YNL293W YEL1P34225 687 aa8.02□□□□□ -1.13
MSB3YNL293W SHC1P39000 512 aa8.02□□□□□ -1.13
MSB3YNL293W BRR1Q99177 341 aaPredicted RBP8.02□□□□□ -1.13
MSB3YNL293W FAR1P21268 830 aa8.01□□□□□ -1.13
MSB3YNL293W HSP104P31539 908 aaKnown RBP8.01□□□□□ -1.13
MSB3YNL293W RPC37P36121 282 aa8.01□□□□□ -1.13
MSB3YNL293W HOS2P53096 452 aaPredicted RBP8.01□□□□□ -1.13
MSB3YNL293W VTC3Q02725 835 aa8.01□□□□□ -1.13
MSB3YNL293W GDE1Q02979 1223 aa8.01□□□□□ -1.13
MSB3YNL293W HOT1Q03213 719 aa8.01□□□□□ -1.13
MSB3YNL293W MRD1Q06106 887 aaKnown RBP8.01□□□□□ -1.13
MSB3YNL293W AOS1Q06624 347 aa8.01□□□□□ -1.13
MSB3YNL293W YDL144CQ07589 356 aa8.01□□□□□ -1.13
MSB3YNL293W PSK2Q08217 1101 aa8.01□□□□□ -1.13
MSB3YNL293W RPL17AP05740 184 aaKnown RBP8.01□□□□□ -1.13
MSB3YNL293W CDC37P06101 506 aaKnown RBP8.01□□□□□ -1.13
MSB3YNL293W YLF2P38746 405 aa8.01□□□□□ -1.13
MSB3YNL293W YIR042CP40586 236 aa8.01□□□□□ -1.13
MSB3YNL293W JSN1P47135 1091 aaKnown RBP RIP-Chip data8.01□□□□□ -1.13not detected
MSB3YNL293W GYP7P48365 746 aa8.01□□□□□ -1.13
MSB3YNL293W BNI4P53858 892 aa8.01□□□□□ -1.13
MSB3YNL293W BRE1Q07457 700 aaKnown RBP8.01□□□□□ -1.13
MSB3YNL293W RTS3P53289 263 aa8□□□□□ -1.13
MSB3YNL293W MEH1Q02205 184 aa8□□□□□ -1.13
MSB3YNL293W NUP159P40477 1460 aa8□□□□□ -1.13
MSB3YNL293W ROM2P51862 1356 aaKnown RBP8□□□□□ -1.13
MSB3YNL293W EFM2P38347 419 aa7.99□□□□□ -1.13
MSB3YNL293W RIA1P53893 1110 aa7.99□□□□□ -1.13
MSB3YNL293W GCN2P15442 1659 aa7.99□□□□□ -1.13
MSB3YNL293W MET5P47169 1442 aa7.99□□□□□ -1.13
MSB3YNL293W ARD1P07347 238 aaPredicted RBP7.99□□□□□ -1.13
MSB3YNL293W CDC48P25694 835 aaKnown RBP7.99□□□□□ -1.13
MSB3YNL293W RPN12P32496 274 aa7.99□□□□□ -1.13
MSB3YNL293W SLD2P34252 453 aa7.99□□□□□ -1.13
MSB3YNL293W ATG14P38270 344 aa7.99□□□□□ -1.13
MSB3YNL293W IES2P40154 320 aa7.99□□□□□ -1.13
MSB3YNL293W YFR006WP43590 535 aa7.99□□□□□ -1.13
MSB3YNL293W PRP31P49704 494 aaPredicted RBP7.99□□□□□ -1.13
MSB3YNL293W BNI5P53890 448 aaKnown RBP7.99□□□□□ -1.13
MSB3YNL293W GYL1Q04322 720 aa7.99□□□□□ -1.13
MSB3YNL293W KRE28Q04431 385 aa7.99□□□□□ -1.13
MSB3YNL293W BUD21Q08492 214 aaPredicted RBP7.99□□□□□ -1.13
MSB3YNL293W SRS2P12954 1174 aa7.98□□□□□ -1.13
MSB3YNL293W SEC23P15303 768 aaKnown RBP7.98□□□□□ -1.13
MSB3YNL293W BUD14P27637 709 aa7.98□□□□□ -1.13
MSB3YNL293W SKI2P35207 1287 aaKnown RBP RIP-Chip data7.98□□□□□ -1.13not detected
MSB3YNL293W SSP1P38871 571 aa7.98□□□□□ -1.13
MSB3YNL293W HEH2Q03281 663 aa7.98□□□□□ -1.13
MSB3YNL293W WHI5Q12416 295 aa7.98□□□□□ -1.13
MSB3YNL293W RPO31P04051 1460 aa7.98□□□□□ -1.13
MSB3YNL293W PET123P17558 318 aa7.97□□□□□ -1.13
MSB3YNL293W RME1P32338 300 aaKnown RBP7.97□□□□□ -1.13
MSB3YNL293W KAR9P32526 644 aa7.97□□□□□ -1.13
MSB3YNL293W MFT1P33441 392 aaKnown RBP7.97□□□□□ -1.13
MSB3YNL293W TY4A-JP47023 414 aa7.97□□□□□ -1.13
MSB3YNL293W AIM21P40563 679 aa7.97□□□□□ -1.13
MSB3YNL293W HIR2P32480 875 aa7.96□□□□□ -1.13
MSB3YNL293W UBP14P38237 781 aaKnown RBP7.96□□□□□ -1.13
MSB3YNL293W RVS167P39743 482 aaKnown RBP7.96□□□□□ -1.13
MSB3YNL293W MVP1P40959 511 aaKnown RBP7.96□□□□□ -1.13
MSB3YNL293W CIR1P42940 261 aa7.96□□□□□ -1.13
MSB3YNL293W DSL1P53847 754 aa7.96□□□□□ -1.13
MSB3YNL293W TIM50Q02776 476 aa7.96□□□□□ -1.13
MSB3YNL293W NOC3Q07896 663 aaPredicted RBP7.96□□□□□ -1.13
MSB3YNL293W IOC2Q12072 812 aa7.96□□□□□ -1.13
MSB3YNL293W RUD3Q12234 484 aaKnown RBP7.96□□□□□ -1.13
MSB3YNL293W CDC31P06704 161 aaKnown RBP7.95□□□□□ -1.14
MSB3YNL293W TPD3P31383 635 aa7.95□□□□□ -1.14
MSB3YNL293W YJR142WP47173 342 aa7.95□□□□□ -1.14
MSB3YNL293W RTF1P53064 558 aa7.95□□□□□ -1.14
MSB3YNL293W ERB1Q04660 807 aaKnown RBP7.95□□□□□ -1.14
MSB3YNL293W RSC2Q06488 889 aa7.95□□□□□ -1.14
MSB3YNL293W LAM6Q08001 693 aa7.95□□□□□ -1.14
MSB3YNL293W SEC66P33754 206 aa7.95□□□□□ -1.14
MSB3YNL293W MPE1P35728 441 aaKnown RBP7.95□□□□□ -1.14
MSB3YNL293W RFC5P38251 354 aa7.95□□□□□ -1.14
MSB3YNL293W SET2P46995 733 aaKnown RBP7.95□□□□□ -1.14
MSB3YNL293W YGL082WP53155 381 aa7.95□□□□□ -1.14
MSB3YNL293W LCB5Q06147 687 aaKnown RBP7.95□□□□□ -1.14
MSB3YNL293W CHS5Q12114 671 aaKnown RBP7.95□□□□□ -1.14
MSB3YNL293W PDR18P53756 1333 aa7.95□□□□□ -1.14
MSB3YNL293W PDR5P33302 1511 aaKnown RBP7.95□□□□□ -1.14
MSB3YNL293W CDC10P25342 322 aaKnown RBP7.94□□□□□ -1.14
MSB3YNL293W MET4P32389 672 aa7.94□□□□□ -1.14
MSB3YNL293W MNR2P35724 969 aa7.94□□□□□ -1.14
MSB3YNL293W YCK3P39962 524 aa7.94□□□□□ -1.14
MSB3YNL293W RRT14P40470 206 aa7.94□□□□□ -1.14
MSB3YNL293W KRE33P53914 1056 aaKnown RBP7.94□□□□□ -1.14
MSB3YNL293W YMR111CQ04461 462 aaPredicted RBP7.94□□□□□ -1.14
MSB3YNL293W TSR1Q07381 788 aaKnown RBP7.94□□□□□ -1.14
MSB3YNL293W TFB4Q12004 338 aa7.94□□□□□ -1.14
MSB3YNL293W SWR1Q05471 1514 aa7.94□□□□□ -1.14
MSB3YNL293W SSK2P53599 1579 aa7.94□□□□□ -1.14
MSB3YNL293W IQG1Q12280 1495 aa7.94□□□□□ -1.14
MSB3YNL293W MSM1P22438 575 aa7.93□□□□□ -1.14
MSB3YNL293W CSE1P33307 960 aa7.93□□□□□ -1.14
MSB3YNL293W PTH2P34222 208 aa7.93□□□□□ -1.14
MSB3YNL293W UBP13P38187 747 aa7.93□□□□□ -1.14
MSB3YNL293W ORM1P53224 222 aa7.93□□□□□ -1.14
Retrieved 100 of 5,963 RNA–protein pairs in 8.8 ms