RNA–Protein interactions for RNA: YNL224C

SQS1, Transcript of Protein that stimulates the ATPase and helicase activities of Prp43p, yeastyeast

Gene SQS1, Length 2,304 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SQS1YNL224C KDX1P36005 433 aa3.79□□□□□ -1.8
SQS1YNL224C MET1P36150 593 aa3.79□□□□□ -1.8
SQS1YNL224C RTT105P40063 208 aa3.79□□□□□ -1.8
SQS1YNL224C SSB2P40150 613 aaKnown RBP3.79□□□□□ -1.8
SQS1YNL224C PEX21P50091 288 aa3.79□□□□□ -1.8
SQS1YNL224C RIA1P53893 1110 aa3.79□□□□□ -1.8
SQS1YNL224C ARV1Q06541 321 aa3.79□□□□□ -1.8
SQS1YNL224C YOR389WQ08912 624 aa3.79□□□□□ -1.8
SQS1YNL224C RME1P32338 300 aaKnown RBP3.79□□□□□ -1.8
SQS1YNL224C PUP2P32379 260 aa3.79□□□□□ -1.8
SQS1YNL224C IME2P32581 645 aa3.79□□□□□ -1.8
SQS1YNL224C EFM2P38347 419 aa3.79□□□□□ -1.8
SQS1YNL224C RIC1P40395 1056 aa3.79□□□□□ -1.8
SQS1YNL224C GCD10P41814 478 aa3.79□□□□□ -1.8
SQS1YNL224C OYE2Q03558 400 aaKnown RBP3.79□□□□□ -1.8
SQS1YNL224C PUF6Q04373 656 aaKnown RBP3.79□□□□□ -1.8
SQS1YNL224C ERV41Q04651 352 aa3.79□□□□□ -1.8
SQS1YNL224C MPC54Q08550 464 aa3.79□□□□□ -1.8
SQS1YNL224C CLP1Q08685 445 aaPredicted RBP3.79□□□□□ -1.8
SQS1YNL224C MSB4Q12317 492 aa3.79□□□□□ -1.8
SQS1YNL224C YEF3P16521 1044 aaKnown RBP3.78□□□□□ -1.8
SQS1YNL224C CHL1P22516 861 aaPredicted RBP3.78□□□□□ -1.8
SQS1YNL224C TRX2P22803 104 aaKnown RBP3.78□□□□□ -1.8
SQS1YNL224C ANP1P32629 500 aa3.78□□□□□ -1.8
SQS1YNL224C ECM32P32644 1121 aaKnown RBP3.78□□□□□ -1.8
SQS1YNL224C SEC61P32915 480 aa3.78□□□□□ -1.8
SQS1YNL224C ABZ1P37254 787 aaPredicted RBP3.78□□□□□ -1.8
SQS1YNL224C UBP13P38187 747 aa3.78□□□□□ -1.8
SQS1YNL224C VPS41P38959 992 aa3.78□□□□□ -1.8
SQS1YNL224C BEM4P39011 633 aa3.78□□□□□ -1.8
SQS1YNL224C YMR124WP39523 943 aaKnown RBP3.78□□□□□ -1.8
SQS1YNL224C CLB5P30283 435 aa3.78□□□□□ -1.8
SQS1YNL224C TAF5P38129 798 aa3.78□□□□□ -1.8
SQS1YNL224C STM1P39015 273 aaKnown RBP3.78□□□□□ -1.8
SQS1YNL224C DSN1P40568 576 aa3.78□□□□□ -1.8
SQS1YNL224C DSL1P53847 754 aa3.78□□□□□ -1.8
SQS1YNL224C VPS20Q04272 221 aa3.78□□□□□ -1.8
SQS1YNL224C ATG26Q06321 1198 aa3.78□□□□□ -1.8
SQS1YNL224C PCL8Q08966 492 aa3.78□□□□□ -1.8
SQS1YNL224C RKM4Q12504 494 aa3.78□□□□□ -1.8
SQS1YNL224C THS1P04801 734 aaKnown RBP3.77□□□□□ -1.81
SQS1YNL224C HEM3P28789 327 aa3.77□□□□□ -1.81
SQS1YNL224C RPN12P32496 274 aa3.77□□□□□ -1.81
SQS1YNL224C BUD2P33314 1104 aa3.77□□□□□ -1.81
SQS1YNL224C NIP100P33420 868 aa3.77□□□□□ -1.81
SQS1YNL224C RXT2P38255 430 aa3.77□□□□□ -1.81
SQS1YNL224C XDJ1P39102 459 aa3.77□□□□□ -1.81
SQS1YNL224C MEF2P39677 819 aa3.77□□□□□ -1.81
SQS1YNL224C SIT1P39980 628 aa3.77□□□□□ -1.81
SQS1YNL224C RTT106P40161 455 aa3.77□□□□□ -1.81
SQS1YNL224C YML119WQ03208 357 aa3.77□□□□□ -1.81
SQS1YNL224C MTC5Q03897 1148 aa3.77□□□□□ -1.81
SQS1YNL224C ARR2Q06597 130 aa3.77□□□□□ -1.81
SQS1YNL224C PMT7Q06644 662 aa3.77□□□□□ -1.81
SQS1YNL224C DPH6Q12429 685 aa3.77□□□□□ -1.81
SQS1YNL224C KEX2P13134 814 aa3.77□□□□□ -1.81
SQS1YNL224C KRR1P25586 316 aaPredicted RBP3.77□□□□□ -1.81
SQS1YNL224C KIP2P28743 706 aa3.77□□□□□ -1.81
SQS1YNL224C VPS24P36095 224 aaKnown RBP3.77□□□□□ -1.81
SQS1YNL224C PAF1P38351 445 aa3.77□□□□□ -1.81
SQS1YNL224C GUA1P38625 525 aaKnown RBP3.77□□□□□ -1.81
SQS1YNL224C YGL081WP53156 320 aa3.77□□□□□ -1.81
SQS1YNL224C HST2P53686 357 aa3.77□□□□□ -1.81
SQS1YNL224C HEH2Q03281 663 aa3.77□□□□□ -1.81
SQS1YNL224C RNH1Q04740 348 aa3.77□□□□□ -1.81
SQS1YNL224C ARR1Q06596 294 aa3.77□□□□□ -1.81
SQS1YNL224C CSR1Q06705 408 aaKnown RBP3.77□□□□□ -1.81
SQS1YNL224C SAC3P46674 1301 aa3.76□□□□□ -1.81
SQS1YNL224C FOB1O13329 566 aa3.76□□□□□ -1.81
SQS1YNL224C DPS1P04802 557 aaKnown RBP3.76□□□□□ -1.81
SQS1YNL224C CIT2P08679 460 aa3.76□□□□□ -1.81
SQS1YNL224C MPH2P0CD99 609 aa3.76□□□□□ -1.81
SQS1YNL224C MRPL25P23369 157 aa3.76□□□□□ -1.81
SQS1YNL224C BIO2P32451 375 aa3.76□□□□□ -1.81
SQS1YNL224C YLF2P38746 405 aa3.76□□□□□ -1.81
SQS1YNL224C CIC1P38779 376 aaKnown RBP3.76□□□□□ -1.81
SQS1YNL224C YER034WP40022 185 aaKnown RBP3.76□□□□□ -1.81
SQS1YNL224C JJJ1P53863 590 aa3.76□□□□□ -1.81
SQS1YNL224C MRD1Q06106 887 aaKnown RBP3.76□□□□□ -1.81
SQS1YNL224C LSP1Q12230 341 aaKnown RBP3.76□□□□□ -1.81
SQS1YNL224C YVC1Q12324 675 aa3.76□□□□□ -1.81
SQS1YNL224C STN1P38960 494 aa3.76□□□□□ -1.81
SQS1YNL224C VTC4P47075 721 aa3.76□□□□□ -1.81
SQS1YNL224C HOL1P53389 586 aa3.76□□□□□ -1.81
SQS1YNL224C YDR338CQ05497 695 aa3.76□□□□□ -1.81
SQS1YNL224C NDL1Q06568 189 aa3.76□□□□□ -1.81
SQS1YNL224C HOM3P10869 527 aa3.75□□□□□ -1.81
SQS1YNL224C APN1P22936 367 aa3.75□□□□□ -1.81
SQS1YNL224C ELM1P32801 640 aa3.75□□□□□ -1.81
SQS1YNL224C MRE11P32829 692 aa3.75□□□□□ -1.81
SQS1YNL224C DLD1P32891 587 aa3.75□□□□□ -1.81
SQS1YNL224C STO1P34160 861 aaKnown RBP3.75□□□□□ -1.81
SQS1YNL224C RTG3P38165 486 aa3.75□□□□□ -1.81
SQS1YNL224C VPS29P38759 282 aa3.75□□□□□ -1.81
SQS1YNL224C UBP12P39538 1254 aa3.75□□□□□ -1.81
SQS1YNL224C KEL2P50090 882 aa3.75□□□□□ -1.81
SQS1YNL224C YNL050CP53952 270 aa3.75□□□□□ -1.81
SQS1YNL224C YNL035CP53962 389 aaKnown RBP3.75□□□□□ -1.81
SQS1YNL224C COG8Q04632 607 aa3.75□□□□□ -1.81
SQS1YNL224C MAG2Q06436 670 aaKnown RBP3.75□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 23.8 ms