RNA–Protein interactions for RNA: YNL209W

SSB2, Transcript of Cytoplasmic ATPase that is a ribosome-associated molecular chaperone, yeast

Gene SSB2, Length 1,842 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSB2	YNL209W	DOT5	P40553	215 aa		5.55	□□□□□ -1.52
SSB2	YNL209W	HXT10	P43581	546 aa		5.55	□□□□□ -1.52
SSB2	YNL209W	HXT17	P53631	564 aa		5.55	□□□□□ -1.52
SSB2	YNL209W	ECM16	Q04217	1267 aa	Known RBP	5.55	□□□□□ -1.52
SSB2	YNL209W	GCR2	Q01722	534 aa		5.54	□□□□□ -1.52
SSB2	YNL209W	FOX2	Q02207	900 aa	Known RBP	5.54	□□□□□ -1.52
SSB2	YNL209W	FCP1	Q03254	732 aa		5.54	□□□□□ -1.52
SSB2	YNL209W	YAH1	Q12184	172 aa	Known RBP	5.54	□□□□□ -1.52
SSB2	YNL209W	UBP12	P39538	1254 aa		5.53	□□□□□ -1.52
SSB2	YNL209W	VAS1	P07806	1104 aa	Known RBP	5.53	□□□□□ -1.52
SSB2	YNL209W	PKH1	Q03407	766 aa		5.53	□□□□□ -1.52
SSB2	YNL209W	YPR204W	Q08995	1032 aa		5.53	□□□□□ -1.52
SSB2	YNL209W	DCD1	P06773	312 aa		5.52	□□□□□ -1.53
SSB2	YNL209W	CDC16	P09798	840 aa		5.52	□□□□□ -1.53
SSB2	YNL209W	CLC1	P17891	233 aa		5.52	□□□□□ -1.53
SSB2	YNL209W	YGR130C	P53278	816 aa		5.52	□□□□□ -1.53
SSB2	YNL209W	ROM2	P51862	1356 aa	Known RBP	5.51	□□□□□ -1.53
SSB2	YNL209W	ARG8	P18544	423 aa		5.51	□□□□□ -1.53
SSB2	YNL209W	YKR075C	P36155	307 aa		5.51	□□□□□ -1.53
SSB2	YNL209W	TIF4632	P39936	914 aa	Known RBP	5.51	□□□□□ -1.53
SSB2	YNL209W	YGL082W	P53155	381 aa		5.51	□□□□□ -1.53
SSB2	YNL209W	SSP2	Q08646	371 aa		5.51	□□□□□ -1.53
SSB2	YNL209W	PDR18	P53756	1333 aa		5.51	□□□□□ -1.53
SSB2	YNL209W	NOT3	P06102	836 aa	Known RBP	5.51	□□□□□ -1.53
SSB2	YNL209W	SRS2	P12954	1174 aa		5.51	□□□□□ -1.53
SSB2	YNL209W	SNF7	P39929	240 aa	Known RBP	5.51	□□□□□ -1.53
SSB2	YNL209W	ITC1	P53125	1264 aa		5.51	□□□□□ -1.53
SSB2	YNL209W	NCB2	Q92317	146 aa		5.51	□□□□□ -1.53
SSB2	YNL209W	ROX1	P25042	368 aa		5.5	□□□□□ -1.53
SSB2	YNL209W	VPS24	P36095	224 aa	Known RBP	5.5	□□□□□ -1.53
SSB2	YNL209W	KTR3	P38130	404 aa	Predicted RBP	5.5	□□□□□ -1.53
SSB2	YNL209W	ECM21	P38167	1117 aa	Known RBP	5.5	□□□□□ -1.53
SSB2	YNL209W	YJR008W	P47085	338 aa		5.5	□□□□□ -1.53
SSB2	YNL209W	YGL081W	P53156	320 aa		5.5	□□□□□ -1.53
SSB2	YNL209W	SER1	P33330	395 aa	Known RBP	5.49	□□□□□ -1.53
SSB2	YNL209W	TEA1	P47988	759 aa		5.49	□□□□□ -1.53
SSB2	YNL209W	YLR271W	Q06152	274 aa		5.49	□□□□□ -1.53
SSB2	YNL209W	FPR4	Q06205	392 aa	Predicted RBP	5.49	□□□□□ -1.53
SSB2	YNL209W	GRX1	P25373	110 aa	Known RBP	5.48	□□□□□ -1.53
SSB2	YNL209W	HGH1	P48362	394 aa	Known RBP	5.48	□□□□□ -1.53
SSB2	YNL209W	MRPS35	P53292	345 aa		5.48	□□□□□ -1.53
SSB2	YNL209W	ALO1	P54783	526 aa	Known RBP	5.48	□□□□□ -1.53
SSB2	YNL209W	RIM20	Q12033	661 aa		5.48	□□□□□ -1.53
SSB2	YNL209W	RIM15	P43565	1770 aa		5.48	□□□□□ -1.53
SSB2	YNL209W	AI2	P03876	854 aa		5.48	□□□□□ -1.53
SSB2	YNL209W	TRL1	P09880	827 aa	Known RBP	5.48	□□□□□ -1.53
SSB2	YNL209W	MSP1	P28737	362 aa		5.48	□□□□□ -1.53
SSB2	YNL209W	RPN1	P38764	993 aa	Known RBP	5.48	□□□□□ -1.53
SSB2	YNL209W	SET1	P38827	1080 aa	Known RBP	5.48	□□□□□ -1.53
SSB2	YNL209W	RPN11	P43588	306 aa	Known RBP	5.48	□□□□□ -1.53
SSB2	YNL209W	NPA3	P47122	385 aa		5.48	□□□□□ -1.53
SSB2	YNL209W	PIB2	P53191	635 aa		5.48	□□□□□ -1.53
SSB2	YNL209W	GRX3	Q03835	250 aa		5.48	□□□□□ -1.53
SSB2	YNL209W	SSK22	P25390	1331 aa	Predicted RBP	5.47	□□□□□ -1.53
SSB2	YNL209W	HSP82	P02829	709 aa	Known RBP	5.47	□□□□□ -1.53
SSB2	YNL209W	SSF1	P38789	453 aa	Predicted RBP	5.47	□□□□□ -1.53
SSB2	YNL209W	YIL055C	P40523	627 aa	Known RBP	5.47	□□□□□ -1.53
SSB2	YNL209W	YGL242C	P53066	181 aa		5.47	□□□□□ -1.53
SSB2	YNL209W	VPS20	Q04272	221 aa		5.47	□□□□□ -1.53
SSB2	YNL209W	LAM6	Q08001	693 aa		5.47	□□□□□ -1.53
SSB2	YNL209W	PHM7	Q12252	991 aa		5.47	□□□□□ -1.53
SSB2	YNL209W	AAP1	P37898	856 aa	Known RBP	5.46	□□□□□ -1.53
SSB2	YNL209W	SLN1	P39928	1220 aa	Predicted RBP	5.46	□□□□□ -1.53
SSB2	YNL209W	UBP16	Q02863	499 aa		5.46	□□□□□ -1.53
SSB2	YNL209W	BRE1	Q07457	700 aa	Known RBP	5.46	□□□□□ -1.53
SSB2	YNL209W	PLP2	Q12017	286 aa		5.46	□□□□□ -1.53
SSB2	YNL209W	HIF1	Q12373	385 aa		5.46	□□□□□ -1.53
SSB2	YNL209W	RNA1	P11745	407 aa	Known RBP	5.46	□□□□□ -1.54
SSB2	YNL209W	MLC1	P53141	149 aa		5.46	□□□□□ -1.54
SSB2	YNL209W	LSP1	Q12230	341 aa	Known RBP	5.46	□□□□□ -1.54
SSB2	YNL209W	RNR2	P09938	399 aa	Known RBP	5.45	□□□□□ -1.54
SSB2	YNL209W	RPN7	Q06103	429 aa	Known RBP	5.45	□□□□□ -1.54
SSB2	YNL209W	GRE2	Q12068	342 aa	Known RBP	5.45	□□□□□ -1.54
SSB2	YNL209W	QCR6	P00127	147 aa		5.44	□□□□□ -1.54
SSB2	YNL209W	SSA1	P10591	642 aa	Known RBP	5.44	□□□□□ -1.54
SSB2	YNL209W	SSA2	P10592	639 aa	Known RBP	5.44	□□□□□ -1.54
SSB2	YNL209W	SEC18	P18759	758 aa	Known RBP	5.44	□□□□□ -1.54
SSB2	YNL209W	TOA1	P32773	286 aa		5.44	□□□□□ -1.54
SSB2	YNL209W	PRP40	P33203	583 aa	Known RBP	5.44	□□□□□ -1.54
SSB2	YNL209W	ARL1	P38116	183 aa	Known RBP	5.44	□□□□□ -1.54
SSB2	YNL209W	NPR2	P39923	615 aa		5.44	□□□□□ -1.54
SSB2	YNL209W	EPS1	P40557	701 aa		5.44	□□□□□ -1.54
SSB2	YNL209W	YNL193W	P53870	558 aa		5.44	□□□□□ -1.54
SSB2	YNL209W	NYV1	Q12255	253 aa		5.44	□□□□□ -1.54
SSB2	YNL209W	GIN4	Q12263	1142 aa		5.44	□□□□□ -1.54
SSB2	YNL209W	MSB4	Q12317	492 aa		5.44	□□□□□ -1.54
SSB2	YNL209W	GYP5	Q12344	894 aa		5.44	□□□□□ -1.54
SSB2	YNL209W	DUR1,2	P32528	1835 aa	Known RBP	5.44	□□□□□ -1.54
SSB2	YNL209W	KTR1	P27810	393 aa	Known RBP	5.44	□□□□□ -1.54
SSB2	YNL209W	SWE1	P32944	819 aa		5.44	□□□□□ -1.54
SSB2	YNL209W	PBY1	P38254	753 aa		5.44	□□□□□ -1.54
SSB2	YNL209W	STM1	P39015	273 aa	Known RBP	5.44	□□□□□ -1.54
SSB2	YNL209W	YJL181W	P46987	611 aa		5.44	□□□□□ -1.54
SSB2	YNL209W	CWH41	P53008	833 aa		5.44	□□□□□ -1.54
SSB2	YNL209W	CTI6	Q08923	506 aa		5.44	□□□□□ -1.54
SSB2	YNL209W	TSR3	Q12094	313 aa	Known RBP	5.44	□□□□□ -1.54
SSB2	YNL209W	SNU66	Q12420	587 aa	Predicted RBP	5.44	□□□□□ -1.54
SSB2	YNL209W	PGA3	Q12746	312 aa	Known RBP	5.44	□□□□□ -1.54
SSB2	YNL209W	NHA1	Q99271	985 aa		5.44	□□□□□ -1.54
SSB2	YNL209W	ENT3	P47160	408 aa		5.43	□□□□□ -1.54

Retrieved 100 of 5,963 RNA–protein pairs in 35.8 ms