RNA–Protein interactions for RNA: YMR297W

PRC1, Transcript of Vacuolar carboxypeptidase Y (proteinase C, CPY), yeastyeast

Gene PRC1, Length 1,599 nt, Biotype protein coding, Subcellular localisation Mitochondria, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRC1YMR297W NPR3P38742 1146 aa8.69□□□□□ -1.02
PRC1YMR297W TAN1P53072 289 aaPredicted RBP8.69□□□□□ -1.02
PRC1YMR297W NNF2P53253 936 aa8.69□□□□□ -1.02
PRC1YMR297W PET111P08468 800 aa8.69□□□□□ -1.02
PRC1YMR297W CCT5P40413 562 aaKnown RBP8.69□□□□□ -1.02
PRC1YMR297W JSN1P47135 1091 aaKnown RBP RIP-Chip data8.69□□□□□ -1.02not detected
PRC1YMR297W PSH1Q12161 406 aa8.69□□□□□ -1.02
PRC1YMR297W BCK1Q01389 1478 aa8.68□□□□□ -1.02
PRC1YMR297W SEC7P11075 2009 aaKnown RBP8.68□□□□□ -1.02
PRC1YMR297W ATE1P16639 503 aa8.68□□□□□ -1.02
PRC1YMR297W ELM1P32801 640 aa8.68□□□□□ -1.02
PRC1YMR297W YNG2P38806 282 aaKnown RBP8.68□□□□□ -1.02
PRC1YMR297W MVP1P40959 511 aaKnown RBP8.68□□□□□ -1.02
PRC1YMR297W PUS1Q12211 544 aaKnown RBP8.68□□□□□ -1.02
PRC1YMR297W GIN4Q12263 1142 aa8.68□□□□□ -1.02
PRC1YMR297W USO1P25386 1790 aa8.68□□□□□ -1.02
PRC1YMR297W SPO1P53541 631 aa8.67□□□□□ -1.02
PRC1YMR297W ARP5P53946 755 aa8.67□□□□□ -1.02
PRC1YMR297W GYL1Q04322 720 aa8.67□□□□□ -1.02
PRC1YMR297W COG4Q06096 861 aa8.67□□□□□ -1.02
PRC1YMR297W HSP104P31539 908 aaKnown RBP8.66□□□□□ -1.02
PRC1YMR297W YNL035CP53962 389 aaKnown RBP8.66□□□□□ -1.02
PRC1YMR297W NOP8Q08287 484 aaPredicted RBP8.66□□□□□ -1.02
PRC1YMR297W SEC39Q12745 709 aa8.66□□□□□ -1.02
PRC1YMR297W TRS33Q99394 268 aa8.66□□□□□ -1.02
PRC1YMR297W YNL050CP53952 270 aa8.65□□□□□ -1.02
PRC1YMR297W HIM1Q06674 414 aa8.65□□□□□ -1.02
PRC1YMR297W FRS2P15625 503 aaKnown RBP8.65□□□□□ -1.03
PRC1YMR297W ALD4P46367 519 aaKnown RBP8.65□□□□□ -1.03
PRC1YMR297W CTH1P47976 325 aa8.65□□□□□ -1.03
PRC1YMR297W TAP42Q04372 366 aa8.65□□□□□ -1.03
PRC1YMR297W SGD1Q06132 899 aa8.64□□□□□ -1.03
PRC1YMR297W DUR1,2P32528 1835 aaKnown RBP8.64□□□□□ -1.03
PRC1YMR297W VAS1P07806 1104 aaKnown RBP8.63□□□□□ -1.03
PRC1YMR297W CDC16P09798 840 aa8.63□□□□□ -1.03
PRC1YMR297W MBR1P23493 339 aa8.63□□□□□ -1.03
PRC1YMR297W TTI1P36097 1038 aa8.63□□□□□ -1.03
PRC1YMR297W CSI1Q04368 295 aa8.63□□□□□ -1.03
PRC1YMR297W YPL225WQ08971 146 aaKnown RBP8.63□□□□□ -1.03
PRC1YMR297W YRF1-1P0CX20 1796 aa8.62□□□□□ -1.03
PRC1YMR297W YRF1-5P0CX21 1796 aa8.62□□□□□ -1.03
PRC1YMR297W YRF1-8P0CX22 1796 aa8.62□□□□□ -1.03
PRC1YMR297W RAD3P06839 778 aa8.62□□□□□ -1.03
PRC1YMR297W RAD51P25454 400 aa8.62□□□□□ -1.03
PRC1YMR297W SPT5P27692 1063 aaKnown RBP8.62□□□□□ -1.03
PRC1YMR297W CBF5P33322 483 aaKnown RBP RIP-Chip data8.62□□□□□ -1.03not detected
PRC1YMR297W SRC1Q03707 834 aa8.62□□□□□ -1.03
PRC1YMR297W RPL19AP0CX82 189 aaKnown RBP8.61□□□□□ -1.03
PRC1YMR297W RPL19BP0CX83 189 aaPredicted RBP8.61□□□□□ -1.03
PRC1YMR297W VPS30Q02948 557 aa8.61□□□□□ -1.03
PRC1YMR297W MDM38Q08179 573 aa8.61□□□□□ -1.03
PRC1YMR297W PRX1P34227 261 aaKnown RBP8.61□□□□□ -1.03
PRC1YMR297W SLD2P34252 453 aa8.61□□□□□ -1.03
PRC1YMR297W RIO2P40160 425 aaKnown RBP8.61□□□□□ -1.03
PRC1YMR297W YMR1P47147 688 aaKnown RBP RIP-Chip data8.61□□□□□ -1.03not detected
PRC1YMR297W CTK3P46963 296 aaPredicted RBP8.6□□□□□ -1.03
PRC1YMR297W PEX14P53112 341 aa8.6□□□□□ -1.03
PRC1YMR297W PDI1P17967 522 aaKnown RBP8.59□□□□□ -1.03
PRC1YMR297W STE11P23561 717 aa8.59□□□□□ -1.03
PRC1YMR297W ZUO1P32527 433 aaKnown RBP8.59□□□□□ -1.03
PRC1YMR297W RGD1P38339 666 aa8.59□□□□□ -1.03
PRC1YMR297W GYP7P48365 746 aa8.59□□□□□ -1.03
PRC1YMR297W PET123P17558 318 aa8.58□□□□□ -1.04
PRC1YMR297W OSW7P43611 510 aa8.58□□□□□ -1.04
PRC1YMR297W RIA1P53893 1110 aa8.58□□□□□ -1.04
PRC1YMR297W SRT1Q03175 343 aa8.58□□□□□ -1.04
PRC1YMR297W CTI6Q08923 506 aa8.58□□□□□ -1.04
PRC1YMR297W RRB1Q04225 511 aaKnown RBP8.57□□□□□ -1.04
PRC1YMR297W DDP1Q99321 188 aaKnown RBP8.57□□□□□ -1.04
PRC1YMR297W RPS19AP07280 144 aaKnown RBP8.56□□□□□ -1.04
PRC1YMR297W RPS19BP07281 144 aaPredicted RBP8.56□□□□□ -1.04
PRC1YMR297W DSD1P53095 428 aa8.56□□□□□ -1.04
PRC1YMR297W OMS1Q06668 471 aa8.56□□□□□ -1.04
PRC1YMR297W GRX4P32642 244 aa8.55□□□□□ -1.04
PRC1YMR297W RFC5P38251 354 aa8.55□□□□□ -1.04
PRC1YMR297W RBA50Q04418 439 aa8.55□□□□□ -1.04
PRC1YMR297W CAB1Q04430 367 aa8.55□□□□□ -1.04
PRC1YMR297W TOP1P04786 769 aa8.54□□□□□ -1.04
PRC1YMR297W SEC14P24280 304 aaKnown RBP8.54□□□□□ -1.04
PRC1YMR297W AIM9P40053 627 aaKnown RBP8.54□□□□□ -1.04
PRC1YMR297W BBC1P47068 1157 aa8.54□□□□□ -1.04
PRC1YMR297W GRX3Q03835 250 aa8.54□□□□□ -1.04
PRC1YMR297W MCM16Q12262 181 aa8.54□□□□□ -1.04
PRC1YMR297W SWI1P09547 1314 aa8.54□□□□□ -1.04
PRC1YMR297W GPA1P08539 472 aa8.53□□□□□ -1.04
PRC1YMR297W RRP1P35178 278 aaPredicted RBP8.53□□□□□ -1.04
PRC1YMR297W FYV10P40492 516 aa8.53□□□□□ -1.04
PRC1YMR297W CTF18P49956 741 aa8.53□□□□□ -1.04
PRC1YMR297W PXR1P53335 271 aaPredicted RBP8.53□□□□□ -1.04
PRC1YMR297W RPO41P13433 1351 aaKnown RBP8.53□□□□□ -1.04
PRC1YMR297W UBC1P21734 215 aaKnown RBP8.52□□□□□ -1.04
PRC1YMR297W GCD7P32502 381 aaPredicted RBP8.52□□□□□ -1.04
PRC1YMR297W PCH2P38126 564 aa8.52□□□□□ -1.04
PRC1YMR297W RRM3P38766 723 aa8.52□□□□□ -1.04
PRC1YMR297W CCT4P39078 528 aaKnown RBP8.52□□□□□ -1.04
PRC1YMR297W BDP1P46678 594 aa8.52□□□□□ -1.04
PRC1YMR297W YGL242CP53066 181 aa8.52□□□□□ -1.04
PRC1YMR297W WAR1Q03631 944 aa8.52□□□□□ -1.04
PRC1YMR297W ERV41Q04651 352 aa8.52□□□□□ -1.04
PRC1YMR297W RRP15Q06511 250 aaPredicted RBP8.52□□□□□ -1.04
Retrieved 100 of 5,963 RNA–protein pairs in 19.6 ms