RNA–Protein interactions for RNA: YLR227W-B

YLR227W-B, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YLR227W-B, Length 5,268 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YLR227W-BYLR227W-B BI4P03879 638 aa4.35□□□□□ -1.71
YLR227W-BYLR227W-B LEU2P04173 364 aaPredicted RBP4.35□□□□□ -1.71
YLR227W-BYLR227W-B IXR1P33417 597 aa4.35□□□□□ -1.71
YLR227W-BYLR227W-B NSE3Q05541 303 aa4.35□□□□□ -1.71
YLR227W-BYLR227W-B HCR1Q05775 265 aaKnown RBP4.34□□□□□ -1.71
YLR227W-BYLR227W-B PWP2P25635 923 aaKnown RBP4.34□□□□□ -1.71
YLR227W-BYLR227W-B BUB1P41695 1021 aaKnown RBP RIP-Chip data4.34□□□□□ -1.71not detected
YLR227W-BYLR227W-B VTH1P40438 1549 aa4.34□□□□□ -1.71
YLR227W-BYLR227W-B VTH2P40890 1549 aa4.34□□□□□ -1.71
YLR227W-BYLR227W-B ICL1P28240 557 aaPredicted RBP4.33□□□□□ -1.72
YLR227W-BYLR227W-B DID4P36108 232 aa4.33□□□□□ -1.72
YLR227W-BYLR227W-B MFB1Q04922 465 aa4.33□□□□□ -1.72
YLR227W-BYLR227W-B BIO5P53744 561 aaKnown RBP4.33□□□□□ -1.72
YLR227W-BYLR227W-B VID30P53076 958 aa4.33□□□□□ -1.72
YLR227W-BYLR227W-B CAB1Q04430 367 aa4.33□□□□□ -1.72
YLR227W-BYLR227W-B RLF2Q12495 606 aa4.33□□□□□ -1.72
YLR227W-BYLR227W-B DPS1P04802 557 aaKnown RBP4.32□□□□□ -1.72
YLR227W-BYLR227W-B AFT1P22149 690 aa4.32□□□□□ -1.72
YLR227W-BYLR227W-B KRE5P22023 1365 aa4.32□□□□□ -1.72
YLR227W-BYLR227W-B SNA3P14359 133 aa4.32□□□□□ -1.72
YLR227W-BYLR227W-B OCT1P35999 772 aa4.32□□□□□ -1.72
YLR227W-BYLR227W-B PPX1P38698 397 aa4.32□□□□□ -1.72
YLR227W-BYLR227W-B JJJ2P46997 583 aa4.32□□□□□ -1.72
YLR227W-BYLR227W-B SNU71P53207 620 aaKnown RBP4.32□□□□□ -1.72
YLR227W-BYLR227W-B CBP1P07252 654 aa4.32□□□□□ -1.72
YLR227W-BYLR227W-B SWI6P09959 803 aa4.31□□□□□ -1.72
YLR227W-BYLR227W-B PTP1P25044 335 aa4.31□□□□□ -1.72
YLR227W-BYLR227W-B ICL2Q12031 575 aa4.31□□□□□ -1.72
YLR227W-BYLR227W-B PDR12Q02785 1511 aa4.31□□□□□ -1.72
YLR227W-BYLR227W-B MPP10P47083 593 aaKnown RBP4.31□□□□□ -1.72
YLR227W-BYLR227W-B SNQ2P32568 1501 aaKnown RBP4.31□□□□□ -1.72
YLR227W-BYLR227W-B GRE2Q12068 342 aaKnown RBP4.31□□□□□ -1.72
YLR227W-BYLR227W-B DNF3Q12674 1656 aa4.31□□□□□ -1.72
YLR227W-BYLR227W-B HPR1P17629 752 aaKnown RBP4.3□□□□□ -1.72
YLR227W-BYLR227W-B DOT5P40553 215 aa4.3□□□□□ -1.72
YLR227W-BYLR227W-B ERO1Q03103 563 aa4.3□□□□□ -1.72
YLR227W-BYLR227W-B CDC60P26637 1090 aaKnown RBP4.3□□□□□ -1.72
YLR227W-BYLR227W-B CTF4Q01454 927 aa4.3□□□□□ -1.72
YLR227W-BYLR227W-B YPL034WQ03083 165 aa4.3□□□□□ -1.72
YLR227W-BYLR227W-B RTP1Q12751 981 aa4.3□□□□□ -1.72
YLR227W-BYLR227W-B TRP2P00899 507 aaKnown RBP4.3□□□□□ -1.72
YLR227W-BYLR227W-B ZDS1P50111 915 aaKnown RBP4.3□□□□□ -1.72
YLR227W-BYLR227W-B ECM16Q04217 1267 aaKnown RBP4.3□□□□□ -1.72
YLR227W-BYLR227W-B MMR1Q06324 491 aa4.3□□□□□ -1.72
YLR227W-BYLR227W-B SNU66Q12420 587 aaPredicted RBP4.3□□□□□ -1.72
YLR227W-BYLR227W-B DNM1P54861 757 aa4.3□□□□□ -1.72
YLR227W-BYLR227W-B MAP2P38174 421 aaKnown RBP4.3□□□□□ -1.72
YLR227W-BYLR227W-B JHD1P40034 492 aa4.3□□□□□ -1.72
YLR227W-BYLR227W-B RAD59Q12223 238 aa4.3□□□□□ -1.72
YLR227W-BYLR227W-B CHO2P05374 869 aaKnown RBP4.29□□□□□ -1.72
YLR227W-BYLR227W-B ERG7P38604 731 aa4.29□□□□□ -1.72
YLR227W-BYLR227W-B YJL007CP47080 104 aa4.29□□□□□ -1.72
YLR227W-BYLR227W-B ACK1Q07622 623 aaPredicted RBP4.29□□□□□ -1.72
YLR227W-BYLR227W-B PES4P39684 611 aa4.29□□□□□ -1.72
YLR227W-BYLR227W-B YDR341CQ05506 607 aaKnown RBP4.29□□□□□ -1.72
YLR227W-BYLR227W-B POL30P15873 258 aaKnown RBP4.28□□□□□ -1.72
YLR227W-BYLR227W-B RRP8P38961 392 aaKnown RBP4.28□□□□□ -1.72
YLR227W-BYLR227W-B SRC1Q03707 834 aa4.28□□□□□ -1.72
YLR227W-BYLR227W-B YGL081WP53156 320 aa4.28□□□□□ -1.72
YLR227W-BYLR227W-B CET1O13297 549 aaPredicted RBP4.28□□□□□ -1.72
YLR227W-BYLR227W-B NSE5Q03718 556 aa4.28□□□□□ -1.72
YLR227W-BYLR227W-B SLM3Q12093 417 aa4.28□□□□□ -1.72
YLR227W-BYLR227W-B RRI2Q12348 645 aa4.28□□□□□ -1.72
YLR227W-BYLR227W-B CDC19P00549 500 aaKnown RBP4.28□□□□□ -1.72
YLR227W-BYLR227W-B PCS60P38137 543 aaKnown RBP RIP-Chip data4.28□□□□□ -1.72not detected
YLR227W-BYLR227W-B YJL070CP40361 888 aa4.28□□□□□ -1.72
YLR227W-BYLR227W-B GRX4P32642 244 aa4.27□□□□□ -1.73
YLR227W-BYLR227W-B ULP1Q02724 621 aa4.27□□□□□ -1.73
YLR227W-BYLR227W-B NMD3P38861 518 aaKnown RBP4.27□□□□□ -1.73
YLR227W-BYLR227W-B SES1P07284 462 aaKnown RBP4.27□□□□□ -1.73
YLR227W-BYLR227W-B MUM2P38236 366 aa4.27□□□□□ -1.73
YLR227W-BYLR227W-B TEA1P47988 759 aa4.27□□□□□ -1.73
YLR227W-BYLR227W-B SEC8P32855 1065 aa4.27□□□□□ -1.73
YLR227W-BYLR227W-B YLL058WQ12198 575 aa4.27□□□□□ -1.73
YLR227W-BYLR227W-B MHP1P43638 1398 aa4.27□□□□□ -1.73
YLR227W-BYLR227W-B RAM1P22007 431 aa4.26□□□□□ -1.73
YLR227W-BYLR227W-B BRN1P38170 754 aa4.26□□□□□ -1.73
YLR227W-BYLR227W-B NIT1P40447 199 aa4.26□□□□□ -1.73
YLR227W-BYLR227W-B VID27P40157 782 aa4.26□□□□□ -1.73
YLR227W-BYLR227W-B ADR1P07248 1323 aa4.26□□□□□ -1.73
YLR227W-BYLR227W-B DLD1P32891 587 aa4.25□□□□□ -1.73
YLR227W-BYLR227W-B TIM23P32897 222 aa4.25□□□□□ -1.73
YLR227W-BYLR227W-B RXT2P38255 430 aa4.25□□□□□ -1.73
YLR227W-BYLR227W-B ERG12P07277 443 aa4.25□□□□□ -1.73
YLR227W-BYLR227W-B PUP3P25451 205 aaKnown RBP4.25□□□□□ -1.73
YLR227W-BYLR227W-B IMG2P25642 146 aaPredicted RBP4.25□□□□□ -1.73
YLR227W-BYLR227W-B SEC21P32074 935 aaKnown RBP4.25□□□□□ -1.73
YLR227W-BYLR227W-B HUL4P40985 892 aa4.25□□□□□ -1.73
YLR227W-BYLR227W-B ADE6P38972 1358 aaKnown RBP4.25□□□□□ -1.73
YLR227W-BYLR227W-B CFT2Q12102 859 aaPredicted RBP4.25□□□□□ -1.73
YLR227W-BYLR227W-B TPM1P17536 199 aaKnown RBP4.24□□□□□ -1.73
YLR227W-BYLR227W-B SPE2P21182 396 aa4.24□□□□□ -1.73
YLR227W-BYLR227W-B FOX2Q02207 900 aaKnown RBP4.24□□□□□ -1.73
YLR227W-BYLR227W-B ASH1P34233 588 aa4.24□□□□□ -1.73
YLR227W-BYLR227W-B AAP1P37898 856 aaKnown RBP4.24□□□□□ -1.73
YLR227W-BYLR227W-B YGR266WP53326 701 aa4.24□□□□□ -1.73
YLR227W-BYLR227W-B MIA40P36046 403 aa4.24□□□□□ -1.73
YLR227W-BYLR227W-B KIP3P53086 805 aaKnown RBP4.24□□□□□ -1.73
YLR227W-BYLR227W-B RCM1P53972 490 aa4.24□□□□□ -1.73
YLR227W-BYLR227W-B SIT4P20604 311 aa4.24□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms