RNA–Protein interactions for RNA: YLR146C

SPE4, Transcript of Spermine synthase, yeastyeast

Gene SPE4, Length 903 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPE4YLR146C VPS60Q03390 229 aa8.9□□□□□ -0.98
SPE4YLR146C RTR1P40084 226 aaPredicted RBP8.89□□□□□ -0.99
SPE4YLR146C RRT14P40470 206 aa8.89□□□□□ -0.99
SPE4YLR146C RAS1P01119 309 aa8.88□□□□□ -0.99
SPE4YLR146C MCM2P29469 868 aa8.88□□□□□ -0.99
SPE4YLR146C NMA111P53920 997 aa8.88□□□□□ -0.99
SPE4YLR146C NOP14Q99207 810 aaKnown RBP8.88□□□□□ -0.99
SPE4YLR146C RPN12P32496 274 aa8.87□□□□□ -0.99
SPE4YLR146C YGR273CP53329 174 aa8.87□□□□□ -0.99
SPE4YLR146C MAK21Q12176 1025 aaKnown RBP8.87□□□□□ -0.99
SPE4YLR146C DNF3Q12674 1656 aa8.87□□□□□ -0.99
SPE4YLR146C NUP145P49687 1317 aa8.86□□□□□ -0.99
SPE4YLR146C TPD3P31383 635 aa8.86□□□□□ -0.99
SPE4YLR146C MIC60P36112 540 aa8.86□□□□□ -0.99
SPE4YLR146C KRI1P42846 591 aaKnown RBP8.86□□□□□ -0.99
SPE4YLR146C RRP46P53256 223 aaPredicted RBP8.86□□□□□ -0.99
SPE4YLR146C HST1P53685 503 aa8.86□□□□□ -0.99
SPE4YLR146C MDG1P53885 366 aa8.86□□□□□ -0.99
SPE4YLR146C PUF6Q04373 656 aaKnown RBP8.86□□□□□ -0.99
SPE4YLR146C NMD2P38798 1089 aaKnown RBP8.85□□□□□ -0.99
SPE4YLR146C CIR1P42940 261 aa8.85□□□□□ -0.99
SPE4YLR146C KRE33P53914 1056 aaKnown RBP8.85□□□□□ -0.99
SPE4YLR146C HEF3P53978 1044 aaKnown RBP8.85□□□□□ -0.99
SPE4YLR146C SEC7P11075 2009 aaKnown RBP8.85□□□□□ -0.99
SPE4YLR146C BNR1P40450 1375 aa8.85□□□□□ -0.99
SPE4YLR146C PBY1P38254 753 aa8.84□□□□□ -0.99
SPE4YLR146C HYR1P40581 163 aaKnown RBP8.84□□□□□ -0.99
SPE4YLR146C CEP3P40969 608 aa8.84□□□□□ -0.99
SPE4YLR146C MPE1P35728 441 aaKnown RBP8.83□□□□□ -1
SPE4YLR146C DEF1P35732 738 aaKnown RBP8.83□□□□□ -1
SPE4YLR146C RVS167P39743 482 aaKnown RBP8.83□□□□□ -1
SPE4YLR146C VPS70P47161 811 aa8.83□□□□□ -1
SPE4YLR146C RNT1Q02555 471 aa8.83□□□□□ -1
SPE4YLR146C THI22Q06490 572 aa8.83□□□□□ -1
SPE4YLR146C KEX1P09620 729 aa8.82□□□□□ -1
SPE4YLR146C PRD1P25375 712 aa8.82□□□□□ -1
SPE4YLR146C CLB5P30283 435 aa8.82□□□□□ -1
SPE4YLR146C DEP1P31385 405 aa8.82□□□□□ -1
SPE4YLR146C RSM25P40496 264 aa8.82□□□□□ -1
SPE4YLR146C DSN1P40568 576 aa8.82□□□□□ -1
SPE4YLR146C YPR015CQ12531 247 aa8.82□□□□□ -1
SPE4YLR146C SLI15P38283 698 aa8.81□□□□□ -1
SPE4YLR146C DPL1Q05567 589 aa8.81□□□□□ -1
SPE4YLR146C SFI1Q12369 946 aa8.81□□□□□ -1
SPE4YLR146C RAD50P12753 1312 aa8.8□□□□□ -1
SPE4YLR146C CYC8P14922 966 aa8.8□□□□□ -1
SPE4YLR146C CLB1P24868 471 aa8.8□□□□□ -1
SPE4YLR146C TAF13P11747 167 aa8.79□□□□□ -1
SPE4YLR146C DLD1P32891 587 aa8.79□□□□□ -1
SPE4YLR146C MED8P38304 223 aa8.79□□□□□ -1
SPE4YLR146C NUP188P52593 1655 aaKnown RBP8.78□□□□□ -1
SPE4YLR146C YAP3P38749 330 aa8.78□□□□□ -1
SPE4YLR146C ECM1P39715 212 aa8.78□□□□□ -1
SPE4YLR146C NPA3P47122 385 aa8.78□□□□□ -1
SPE4YLR146C GCR2Q01722 534 aa8.78□□□□□ -1
SPE4YLR146C PSK1P31374 1356 aa8.77□□□□□ -1.01
SPE4YLR146C RAM1P22007 431 aa8.77□□□□□ -1.01
SPE4YLR146C MSH4P40965 878 aaPredicted RBP8.77□□□□□ -1.01
SPE4YLR146C MRS2Q01926 470 aa8.77□□□□□ -1.01
SPE4YLR146C HRQ1Q05549 1077 aa8.77□□□□□ -1.01
SPE4YLR146C LYS2P07702 1392 aa8.76□□□□□ -1.01
SPE4YLR146C BYE1P36106 594 aa8.76□□□□□ -1.01
SPE4YLR146C YOL087CQ99247 1116 aa8.76□□□□□ -1.01
SPE4YLR146C BIK1P11709 440 aa8.75□□□□□ -1.01
SPE4YLR146C AMS1P22855 1083 aa8.75□□□□□ -1.01
SPE4YLR146C UTP13Q05946 817 aaKnown RBP8.75□□□□□ -1.01
SPE4YLR146C BMS1Q08965 1183 aaKnown RBP8.75□□□□□ -1.01
SPE4YLR146C RNR2P09938 399 aaKnown RBP8.74□□□□□ -1.01
SPE4YLR146C SRP54P20424 541 aaKnown RBP8.74□□□□□ -1.01
SPE4YLR146C CSE4P36012 229 aa8.74□□□□□ -1.01
SPE4YLR146C MRPL10P36520 322 aa8.74□□□□□ -1.01
SPE4YLR146C PRP3Q03338 469 aaPredicted RBP8.74□□□□□ -1.01
SPE4YLR146C VPS20Q04272 221 aa8.74□□□□□ -1.01
SPE4YLR146C NKP2Q06162 153 aa8.74□□□□□ -1.01
SPE4YLR146C AUS1Q08409 1394 aa8.73□□□□□ -1.01
SPE4YLR146C USO1P25386 1790 aa8.73□□□□□ -1.01
SPE4YLR146C BCK1Q01389 1478 aa8.73□□□□□ -1.01
SPE4YLR146C KAR2P16474 682 aaKnown RBP8.73□□□□□ -1.01
SPE4YLR146C SIC1P38634 284 aa8.73□□□□□ -1.01
SPE4YLR146C REF2P42073 533 aaPredicted RBP8.73□□□□□ -1.01
SPE4YLR146C TAF8Q03750 510 aa8.73□□□□□ -1.01
SPE4YLR146C RTT109Q07794 436 aa8.73□□□□□ -1.01
SPE4YLR146C MRC1P25588 1096 aa8.72□□□□□ -1.01
SPE4YLR146C HSP82P02829 709 aaKnown RBP8.71□□□□□ -1.02
SPE4YLR146C CWH41P53008 833 aa8.71□□□□□ -1.02
SPE4YLR146C TAP42Q04372 366 aa8.71□□□□□ -1.02
SPE4YLR146C SML1Q04964 104 aa8.71□□□□□ -1.02
SPE4YLR146C SPT2P06843 333 aaPredicted RBP8.7□□□□□ -1.02
SPE4YLR146C MSH1P25846 959 aa8.7□□□□□ -1.02
SPE4YLR146C BRN1P38170 754 aa8.7□□□□□ -1.02
SPE4YLR146C VPS4P52917 437 aa8.7□□□□□ -1.02
SPE4YLR146C APC11Q12157 165 aa8.7□□□□□ -1.02
SPE4YLR146C YRF1-1P0CX20 1796 aa8.7□□□□□ -1.02
SPE4YLR146C YRF1-5P0CX21 1796 aa8.7□□□□□ -1.02
SPE4YLR146C YRF1-8P0CX22 1796 aa8.7□□□□□ -1.02
SPE4YLR146C PET111P08468 800 aa8.69□□□□□ -1.02
SPE4YLR146C SPB4P25808 606 aaPredicted RBP8.69□□□□□ -1.02
SPE4YLR146C SWI3P32591 825 aa8.69□□□□□ -1.02
SPE4YLR146C ELM1P32801 640 aa8.69□□□□□ -1.02
SPE4YLR146C SWE1P32944 819 aa8.69□□□□□ -1.02
Retrieved 100 of 5,963 RNA–protein pairs in 130.3 ms