RNA–Protein interactions for RNA: YKL213C

DOA1, Transcript of WD repeat protein required for ubiquitin-mediated protein degradation, yeast

Gene DOA1, Length 2,148 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DOA1	YKL213C	LPD1	P09624	499 aa	Known RBP	5.96	□□□□□ -1.45
DOA1	YKL213C	BRL1	P38770	471 aa		5.96	□□□□□ -1.45
DOA1	YKL213C	HIF1	Q12373	385 aa		5.96	□□□□□ -1.45
DOA1	YKL213C	HSP82	P02829	709 aa	Known RBP	5.96	□□□□□ -1.46
DOA1	YKL213C	PFF1	P38244	976 aa		5.96	□□□□□ -1.46
DOA1	YKL213C	RRD1	P40454	393 aa	Known RBP	5.96	□□□□□ -1.46
DOA1	YKL213C	ARG8	P18544	423 aa		5.95	□□□□□ -1.46
DOA1	YKL213C	YIL092W	P40497	633 aa		5.95	□□□□□ -1.46
DOA1	YKL213C	YGL082W	P53155	381 aa		5.95	□□□□□ -1.46
DOA1	YKL213C	DNM1	P54861	757 aa		5.95	□□□□□ -1.46
DOA1	YKL213C	PLP2	Q12017	286 aa		5.95	□□□□□ -1.46
DOA1	YKL213C	UTP10	P42945	1769 aa	Known RBP	5.95	□□□□□ -1.46
DOA1	YKL213C	SMY1	P32364	656 aa	Known RBP	5.95	□□□□□ -1.46
DOA1	YKL213C	TOA1	P32773	286 aa		5.95	□□□□□ -1.46
DOA1	YKL213C	RPS0A	P32905	252 aa	Known RBP	5.95	□□□□□ -1.46
DOA1	YKL213C	APL2	P36000	726 aa	Predicted RBP	5.95	□□□□□ -1.46
DOA1	YKL213C	FUN12	P39730	1002 aa	Known RBP	5.95	□□□□□ -1.46
DOA1	YKL213C	NUG1	P40010	520 aa	Known RBP	5.95	□□□□□ -1.46
DOA1	YKL213C	ENV11	P53246	860 aa		5.95	□□□□□ -1.46
DOA1	YKL213C	VPS64	Q03944	604 aa		5.95	□□□□□ -1.46
DOA1	YKL213C	YDR306C	Q06640	478 aa		5.95	□□□□□ -1.46
DOA1	YKL213C	YPR204W	Q08995	1032 aa		5.95	□□□□□ -1.46
DOA1	YKL213C	RAD2	P07276	1031 aa		5.94	□□□□□ -1.46
DOA1	YKL213C	MRP7	P12687	371 aa		5.94	□□□□□ -1.46
DOA1	YKL213C	DAL5	P15365	543 aa		5.94	□□□□□ -1.46
DOA1	YKL213C	SWE1	P32944	819 aa		5.94	□□□□□ -1.46
DOA1	YKL213C	DCD1	P06773	312 aa		5.93	□□□□□ -1.46
DOA1	YKL213C	RPN1	P38764	993 aa	Known RBP	5.93	□□□□□ -1.46
DOA1	YKL213C	SUB1	P54000	292 aa	Known RBP	5.93	□□□□□ -1.46
DOA1	YKL213C	RAT1	Q02792	1006 aa	Known RBP	5.93	□□□□□ -1.46
DOA1	YKL213C	SWI1	P09547	1314 aa		5.93	□□□□□ -1.46
DOA1	YKL213C	NUP133	P36161	1157 aa		5.93	□□□□□ -1.46
DOA1	YKL213C	CST6	P40535	587 aa		5.93	□□□□□ -1.46
DOA1	YKL213C	YPP1	P46951	817 aa		5.93	□□□□□ -1.46
DOA1	YKL213C	SPT2	P06843	333 aa	Predicted RBP	5.92	□□□□□ -1.46
DOA1	YKL213C	YJR008W	P47085	338 aa		5.92	□□□□□ -1.46
DOA1	YKL213C	YGR122W	P53272	402 aa		5.92	□□□□□ -1.46
DOA1	YKL213C	VPS72	Q03388	795 aa		5.92	□□□□□ -1.46
DOA1	YKL213C	YLR271W	Q06152	274 aa		5.92	□□□□□ -1.46
DOA1	YKL213C	IRC3	Q06683	689 aa		5.92	□□□□□ -1.46
DOA1	YKL213C	BDF2	Q07442	638 aa		5.92	□□□□□ -1.46
DOA1	YKL213C	CAF20	P12962	161 aa	Known RBP	5.92	□□□□□ -1.46
DOA1	YKL213C	SSA4	P22202	642 aa	Known RBP	5.92	□□□□□ -1.46
DOA1	YKL213C	PEX21	P50091	288 aa		5.92	□□□□□ -1.46
DOA1	YKL213C	ERO1	Q03103	563 aa		5.92	□□□□□ -1.46
DOA1	YKL213C	CSI1	Q04368	295 aa		5.92	□□□□□ -1.46
DOA1	YKL213C	ICL1	P28240	557 aa	Predicted RBP	5.91	□□□□□ -1.46
DOA1	YKL213C	RAD24	P32641	659 aa		5.91	□□□□□ -1.46
DOA1	YKL213C	FPK1	P53739	893 aa		5.91	□□□□□ -1.46
DOA1	YKL213C	NOP8	Q08287	484 aa	Predicted RBP	5.91	□□□□□ -1.46
DOA1	YKL213C	SLI15	P38283	698 aa		5.9	□□□□□ -1.46
DOA1	YKL213C	PKH1	Q03407	766 aa		5.9	□□□□□ -1.46
DOA1	YKL213C	DIB1	Q06819	143 aa	Predicted RBP	5.9	□□□□□ -1.46
DOA1	YKL213C	RLF2	Q12495	606 aa		5.9	□□□□□ -1.46
DOA1	YKL213C	TRP5	P00931	707 aa	Known RBP	5.9	□□□□□ -1.47
DOA1	YKL213C	RPS19A	P07280	144 aa	Known RBP	5.9	□□□□□ -1.47
DOA1	YKL213C	RPS19B	P07281	144 aa	Predicted RBP	5.9	□□□□□ -1.47
DOA1	YKL213C	ASF1	P32447	279 aa		5.9	□□□□□ -1.47
DOA1	YKL213C	SIT4	P20604	311 aa		5.89	□□□□□ -1.47
DOA1	YKL213C	SWC3	P31376	625 aa		5.89	□□□□□ -1.47
DOA1	YKL213C	SET1	P38827	1080 aa	Known RBP	5.89	□□□□□ -1.47
DOA1	YKL213C	TCB2	P48231	1178 aa		5.89	□□□□□ -1.47
DOA1	YKL213C	DMA2	P53924	522 aa		5.89	□□□□□ -1.47
DOA1	YKL213C	PUS5	Q06244	254 aa		5.89	□□□□□ -1.47
DOA1	YKL213C	YKU70	P32807	602 aa		5.89	□□□□□ -1.47
DOA1	YKL213C	BOI2	P39969	1040 aa		5.89	□□□□□ -1.47
DOA1	YKL213C	FCP1	Q03254	732 aa		5.89	□□□□□ -1.47
DOA1	YKL213C	ATG20	Q07528	640 aa		5.89	□□□□□ -1.47
DOA1	YKL213C	SSK22	P25390	1331 aa	Predicted RBP	5.88	□□□□□ -1.47
DOA1	YKL213C	PMD1	P32634	1753 aa		5.88	□□□□□ -1.47
DOA1	YKL213C	SHC1	P39000	512 aa		5.88	□□□□□ -1.47
DOA1	YKL213C	HAT1	Q12341	374 aa		5.88	□□□□□ -1.47
DOA1	YKL213C	RPS9B	P05755	195 aa	Known RBP	5.87	□□□□□ -1.47
DOA1	YKL213C	POL32	P47110	350 aa		5.87	□□□□□ -1.47
DOA1	YKL213C	RET1	P22276	1149 aa	Known RBP	5.87	□□□□□ -1.47
DOA1	YKL213C	YNG2	P38806	282 aa	Known RBP	5.87	□□□□□ -1.47
DOA1	YKL213C	UBP12	P39538	1254 aa		5.87	□□□□□ -1.47
DOA1	YKL213C	ITC1	P53125	1264 aa		5.87	□□□□□ -1.47
DOA1	YKL213C	UBP16	Q02863	499 aa		5.87	□□□□□ -1.47
DOA1	YKL213C	GRX6	Q12438	231 aa		5.87	□□□□□ -1.47
DOA1	YKL213C	THS1	P04801	734 aa	Known RBP	5.86	□□□□□ -1.47
DOA1	YKL213C	FRD1	P32614	470 aa	Known RBP	5.86	□□□□□ -1.47
DOA1	YKL213C	SPO1	P53541	631 aa		5.86	□□□□□ -1.47
DOA1	YKL213C	PUF6	Q04373	656 aa	Known RBP	5.86	□□□□□ -1.47
DOA1	YKL213C	ILV3	P39522	585 aa	Known RBP	5.86	□□□□□ -1.47
DOA1	YKL213C	SYF1	Q04048	859 aa	Predicted RBP	5.86	□□□□□ -1.47
DOA1	YKL213C	MTC5	Q03897	1148 aa		5.85	□□□□□ -1.47
DOA1	YKL213C	SAS4	Q04003	481 aa		5.85	□□□□□ -1.47
DOA1	YKL213C	SAC3	P46674	1301 aa		5.85	□□□□□ -1.47
DOA1	YKL213C	NHA1	Q99271	985 aa		5.84	□□□□□ -1.47
DOA1	YKL213C	QCR6	P00127	147 aa		5.84	□□□□□ -1.47
DOA1	YKL213C	GCD7	P32502	381 aa	Predicted RBP	5.84	□□□□□ -1.47
DOA1	YKL213C	RTG2	P32608	588 aa	Known RBP	5.84	□□□□□ -1.47
DOA1	YKL213C	TLG1	Q03322	224 aa		5.84	□□□□□ -1.47
DOA1	YKL213C	SUP35	P05453	685 aa	Known RBP	5.83	□□□□□ -1.48
DOA1	YKL213C	RNA1	P11745	407 aa	Known RBP	5.83	□□□□□ -1.48
DOA1	YKL213C	HXT10	P43581	546 aa		5.83	□□□□□ -1.48
DOA1	YKL213C	HGH1	P48362	394 aa	Known RBP	5.83	□□□□□ -1.48
DOA1	YKL213C	YLR278C	Q05854	1341 aa		5.83	□□□□□ -1.48
DOA1	YKL213C	DPL1	Q05567	589 aa		5.83	□□□□□ -1.48

Retrieved 100 of 5,963 RNA–protein pairs in 8.4 ms