RNA–Protein interactions for RNA: YJL194W

CDC6, Transcript of Essential ATP-binding protein required for DNA replication, yeastyeast

Gene CDC6, Length 1,542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC6YJL194W KAR5Q04746 504 aa5.48□□□□□ -1.53
CDC6YJL194W YOL057WQ08225 711 aa5.48□□□□□ -1.53
CDC6YJL194W MCM16Q12262 181 aa5.48□□□□□ -1.53
CDC6YJL194W ENO2P00925 437 aaKnown RBP5.47□□□□□ -1.53
CDC6YJL194W VAC17P25591 423 aa5.47□□□□□ -1.53
CDC6YJL194W GUT2P32191 649 aa5.47□□□□□ -1.53
CDC6YJL194W RGA1P39083 1007 aa5.47□□□□□ -1.53
CDC6YJL194W BDP1P46678 594 aa5.47□□□□□ -1.53
CDC6YJL194W TY4A-JP47023 414 aa5.47□□□□□ -1.53
CDC6YJL194W GRS1P38088 690 aaKnown RBP5.46□□□□□ -1.54
CDC6YJL194W PMC1P38929 1173 aaPredicted RBP5.46□□□□□ -1.54
CDC6YJL194W VAC8P39968 578 aa5.46□□□□□ -1.54
CDC6YJL194W KRI1P42846 591 aaKnown RBP5.46□□□□□ -1.54
CDC6YJL194W RIM21P48565 533 aa5.46□□□□□ -1.54
CDC6YJL194W MAG2Q06436 670 aaKnown RBP5.46□□□□□ -1.54
CDC6YJL194W FRA1Q07825 749 aa5.46□□□□□ -1.54
CDC6YJL194W PPX1P38698 397 aa5.45□□□□□ -1.54
CDC6YJL194W AIM21P40563 679 aa5.45□□□□□ -1.54
CDC6YJL194W UBP3Q01477 912 aaKnown RBP RIP-Chip data5.45□□□□□ -1.54not detected
CDC6YJL194W ECM23Q02710 187 aa5.45□□□□□ -1.54
CDC6YJL194W YPR084WQ06821 456 aa5.45□□□□□ -1.54
CDC6YJL194W YGR161W-CQ3E744 92 aa5.45□□□□□ -1.54
CDC6YJL194W CIT2P08679 460 aa5.44□□□□□ -1.54
CDC6YJL194W GAL11P19659 1081 aa5.44□□□□□ -1.54
CDC6YJL194W MRX10Q05648 414 aa5.44□□□□□ -1.54
CDC6YJL194W KAR1P11927 433 aa5.43□□□□□ -1.54
CDC6YJL194W GRX7P38068 203 aa5.43□□□□□ -1.54
CDC6YJL194W YGL081WP53156 320 aa5.43□□□□□ -1.54
CDC6YJL194W SYH1Q02875 849 aaKnown RBP5.43□□□□□ -1.54
CDC6YJL194W FRK1Q03002 865 aaPredicted RBP5.43□□□□□ -1.54
CDC6YJL194W STE20Q03497 939 aaKnown RBP5.43□□□□□ -1.54
CDC6YJL194W ECM16Q04217 1267 aaKnown RBP5.43□□□□□ -1.54
CDC6YJL194W YDL121CQ07541 149 aa5.43□□□□□ -1.54
CDC6YJL194W YOR131CQ12486 218 aa5.43□□□□□ -1.54
CDC6YJL194W MET1P36150 593 aa5.43□□□□□ -1.54
CDC6YJL194W ERP2P39704 215 aa5.43□□□□□ -1.54
CDC6YJL194W ATG3P40344 310 aa5.43□□□□□ -1.54
CDC6YJL194W MAD1P40957 749 aa5.43□□□□□ -1.54
CDC6YJL194W SRC1Q03707 834 aa5.43□□□□□ -1.54
CDC6YJL194W TMA64Q04600 565 aaKnown RBP5.43□□□□□ -1.54
CDC6YJL194W BRE1Q07457 700 aaKnown RBP5.43□□□□□ -1.54
CDC6YJL194W WRS1Q12109 432 aaKnown RBP5.43□□□□□ -1.54
CDC6YJL194W WHI5Q12416 295 aa5.43□□□□□ -1.54
CDC6YJL194W STB3Q12427 513 aa5.43□□□□□ -1.54
CDC6YJL194W KIP2P28743 706 aa5.42□□□□□ -1.54
CDC6YJL194W TOA1P32773 286 aa5.42□□□□□ -1.54
CDC6YJL194W IXR1P33417 597 aa5.42□□□□□ -1.54
CDC6YJL194W RPT2P40327 437 aaKnown RBP5.42□□□□□ -1.54
CDC6YJL194W EMP47P43555 445 aa5.42□□□□□ -1.54
CDC6YJL194W YJL049WP47048 450 aa5.42□□□□□ -1.54
CDC6YJL194W ALD6P54115 500 aaKnown RBP5.42□□□□□ -1.54
CDC6YJL194W HED1Q03937 162 aa5.42□□□□□ -1.54
CDC6YJL194W UBX7P38349 436 aa5.41□□□□□ -1.54
CDC6YJL194W KTR7P40504 517 aa5.41□□□□□ -1.54
CDC6YJL194W IOC3P43596 787 aa5.41□□□□□ -1.54
CDC6YJL194W PUS5Q06244 254 aa5.41□□□□□ -1.54
CDC6YJL194W GRX4P32642 244 aa5.4□□□□□ -1.54
CDC6YJL194W NOC2P39744 710 aaKnown RBP5.4□□□□□ -1.54
CDC6YJL194W APL6P46682 809 aa5.4□□□□□ -1.54
CDC6YJL194W ALD3P54114 506 aa5.4□□□□□ -1.54
CDC6YJL194W CEF1Q03654 590 aaPredicted RBP5.4□□□□□ -1.54
CDC6YJL194W UTP13Q05946 817 aaKnown RBP5.4□□□□□ -1.54
CDC6YJL194W CDC53Q12018 815 aaKnown RBP5.4□□□□□ -1.54
CDC6YJL194W HIF1Q12373 385 aa5.4□□□□□ -1.54
CDC6YJL194W RAS1P01119 309 aa5.39□□□□□ -1.55
CDC6YJL194W STI1P15705 589 aaKnown RBP RIP-Chip data5.39□□□□□ -1.55not detected
CDC6YJL194W ISF1P32488 338 aa5.39□□□□□ -1.55
CDC6YJL194W MDJ2P42834 146 aa5.39□□□□□ -1.55
CDC6YJL194W NSE3Q05541 303 aa5.39□□□□□ -1.55
CDC6YJL194W TRL1P09880 827 aaKnown RBP5.38□□□□□ -1.55
CDC6YJL194W RPA135P22138 1203 aaKnown RBP5.38□□□□□ -1.55
CDC6YJL194W VMA4P22203 233 aaKnown RBP5.38□□□□□ -1.55
CDC6YJL194W PEP12P32854 288 aa5.38□□□□□ -1.55
CDC6YJL194W MFT1P33441 392 aaKnown RBP5.38□□□□□ -1.55
CDC6YJL194W MNN1P39106 762 aa5.38□□□□□ -1.55
CDC6YJL194W EMW1P42842 904 aaKnown RBP5.38□□□□□ -1.55
CDC6YJL194W YFR016CP43597 1233 aaKnown RBP5.38□□□□□ -1.55
CDC6YJL194W YJR107WP47145 328 aa5.38□□□□□ -1.55
CDC6YJL194W RPN4Q03465 531 aa5.38□□□□□ -1.55
CDC6YJL194W UTP14Q04500 899 aaKnown RBP5.38□□□□□ -1.55
CDC6YJL194W MET6P05694 767 aaKnown RBP5.38□□□□□ -1.55
CDC6YJL194W RDS2P19541 446 aaKnown RBP5.38□□□□□ -1.55
CDC6YJL194W CLN2P20438 545 aa5.38□□□□□ -1.55
CDC6YJL194W MRT4P33201 236 aaKnown RBP5.38□□□□□ -1.55
CDC6YJL194W BOI2P39969 1040 aa5.38□□□□□ -1.55
CDC6YJL194W VPS27P40343 622 aaKnown RBP5.38□□□□□ -1.55
CDC6YJL194W GIR2Q03768 265 aaPredicted RBP5.38□□□□□ -1.55
CDC6YJL194W DPB3P27344 201 aa5.37□□□□□ -1.55
CDC6YJL194W MPE1P35728 441 aaKnown RBP5.37□□□□□ -1.55
CDC6YJL194W RTT106P40161 455 aa5.37□□□□□ -1.55
CDC6YJL194W MSH4P40965 878 aaPredicted RBP5.37□□□□□ -1.55
CDC6YJL194W RPS0BP46654 252 aaKnown RBP5.37□□□□□ -1.55
CDC6YJL194W ENV9Q08651 330 aa5.37□□□□□ -1.55
CDC6YJL194W MNL2Q12205 849 aa5.37□□□□□ -1.55
CDC6YJL194W SPT2P06843 333 aaPredicted RBP5.36□□□□□ -1.55
CDC6YJL194W ATG1P53104 897 aa5.36□□□□□ -1.55
CDC6YJL194W CDC4P07834 779 aa5.35□□□□□ -1.55
CDC6YJL194W GAL2P13181 574 aa5.35□□□□□ -1.55
CDC6YJL194W SEC6P32844 805 aa5.35□□□□□ -1.55
CDC6YJL194W PBP2P38151 413 aaKnown RBP RIP-Chip data5.35□□□□□ -1.55not detected
Retrieved 100 of 5,963 RNA–protein pairs in 57.1 ms