RNA–Protein interactions for RNA: YJL194W

CDC6, Transcript of Essential ATP-binding protein required for DNA replication, yeastyeast

Gene CDC6, Length 1,542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC6YJL194W MTC1P47018 478 aaKnown RBP10.3□□□□□ -0.76
CDC6YJL194W DRS1P32892 752 aaKnown RBP10.27□□□□□ -0.77
CDC6YJL194W FAP1P53971 965 aa9.72□□□□□ -0.85
CDC6YJL194W PRY3P47033 881 aa9.19□□□□□ -0.94
CDC6YJL194W BFR2Q06631 534 aaKnown RBP8.85□□□□□ -0.99
CDC6YJL194W DIP2Q12220 943 aaPredicted RBP8.77□□□□□ -1.01
CDC6YJL194W YCK3P39962 524 aa8.68□□□□□ -1.02
CDC6YJL194W AAD16Q02895 342 aa8.67□□□□□ -1.02
CDC6YJL194W AVT3P36062 692 aa8.64□□□□□ -1.03
CDC6YJL194W PRI1P10363 409 aa8.61□□□□□ -1.03
CDC6YJL194W HAA1Q12753 694 aaKnown RBP8.53□□□□□ -1.04
CDC6YJL194W TFA1P36100 482 aa8.4□□□□□ -1.06
CDC6YJL194W ISW2Q08773 1120 aa8.4□□□□□ -1.06
CDC6YJL194W RQC2Q12532 1038 aaKnown RBP8.34□□□□□ -1.07
CDC6YJL194W RSE1Q04693 1361 aaKnown RBP8.3□□□□□ -1.08
CDC6YJL194W RPG1P38249 964 aaKnown RBP8.25□□□□□ -1.09
CDC6YJL194W TSR3Q12094 313 aaKnown RBP8.1□□□□□ -1.11
CDC6YJL194W RPL17AP05740 184 aaKnown RBP7.97□□□□□ -1.13
CDC6YJL194W RPL17BP46990 184 aaKnown RBP7.97□□□□□ -1.13
CDC6YJL194W TAF7Q05021 590 aa7.93□□□□□ -1.14
CDC6YJL194W REB1P21538 810 aa7.88□□□□□ -1.15
CDC6YJL194W MRPL32P25348 183 aa7.75□□□□□ -1.17
CDC6YJL194W YGL015CP33199 130 aa7.71□□□□□ -1.18
CDC6YJL194W SPT21P35209 758 aa7.7□□□□□ -1.18
CDC6YJL194W RIM101P33400 625 aa7.59□□□□□ -1.19
CDC6YJL194W BUD31P25337 157 aaPredicted RBP7.52□□□□□ -1.21
CDC6YJL194W YKR023WP36119 530 aaKnown RBP7.44□□□□□ -1.22
CDC6YJL194W DMA1P38823 416 aa7.35□□□□□ -1.23
CDC6YJL194W OXP1P28273 1286 aa7.32□□□□□ -1.24
CDC6YJL194W TFC8Q12308 588 aa7.31□□□□□ -1.24
CDC6YJL194W CDC27P38042 758 aa7.29□□□□□ -1.24
CDC6YJL194W HOP09932 586 aa7.26□□□□□ -1.25
CDC6YJL194W LEO1P38439 464 aa7.23□□□□□ -1.25
CDC6YJL194W YIL055CP40523 627 aaKnown RBP7.23□□□□□ -1.25
CDC6YJL194W SSP1P38871 571 aa7.22□□□□□ -1.25
CDC6YJL194W PTP3P40048 928 aa7.22□□□□□ -1.25
CDC6YJL194W DCD1P06773 312 aa7.17□□□□□ -1.26
CDC6YJL194W YAH1Q12184 172 aaKnown RBP7.17□□□□□ -1.26
CDC6YJL194W ARP8Q12386 881 aaKnown RBP RIP-Chip data7.14□□□□□ -1.27not detected
CDC6YJL194W RSM7P47150 247 aa7.13□□□□□ -1.27
CDC6YJL194W YLR271WQ06152 274 aa7.11□□□□□ -1.27
CDC6YJL194W MAP2P38174 421 aaKnown RBP7.11□□□□□ -1.27
CDC6YJL194W UBP10P53874 792 aaPredicted RBP7.1□□□□□ -1.27
CDC6YJL194W BCH2P36122 765 aa7.07□□□□□ -1.28
CDC6YJL194W SIS1P25294 352 aaKnown RBP7.06□□□□□ -1.28
CDC6YJL194W AI2P03876 854 aa7□□□□□ -1.29
CDC6YJL194W MGA2P40578 1113 aa6.99□□□□□ -1.29
CDC6YJL194W BBC1P47068 1157 aa6.99□□□□□ -1.29
CDC6YJL194W SCY1P53009 804 aa6.97□□□□□ -1.29
CDC6YJL194W EPS1P40557 701 aa6.96□□□□□ -1.3
CDC6YJL194W PSD2P53037 1138 aaKnown RBP6.96□□□□□ -1.3
CDC6YJL194W BDF1P35817 686 aa6.91□□□□□ -1.3
CDC6YJL194W UBP9P39967 754 aa6.89□□□□□ -1.31
CDC6YJL194W SLX5P32828 619 aaKnown RBP6.87□□□□□ -1.31
CDC6YJL194W CST9Q06032 482 aa6.87□□□□□ -1.31
CDC6YJL194W TIF4632P39936 914 aaKnown RBP6.81□□□□□ -1.32
CDC6YJL194W TGL3P40308 642 aa6.81□□□□□ -1.32
CDC6YJL194W LEU3P08638 886 aa6.77□□□□□ -1.33
CDC6YJL194W MRM1P25270 412 aa6.76□□□□□ -1.33
CDC6YJL194W RTG3P38165 486 aa6.71□□□□□ -1.34
CDC6YJL194W NSR1P27476 414 aaKnown RBP RIP-Chip data6.68□□□□□ -1.34not detected
CDC6YJL194W AIM44Q99299 758 aa6.67□□□□□ -1.34
CDC6YJL194W RAM2P29703 316 aa6.65□□□□□ -1.35
CDC6YJL194W RCR1P38212 213 aa6.64□□□□□ -1.35
CDC6YJL194W VPS29P38759 282 aa6.63□□□□□ -1.35
CDC6YJL194W DMA2P53924 522 aa6.63□□□□□ -1.35
CDC6YJL194W YMR1P47147 688 aaKnown RBP RIP-Chip data6.6□□□□□ -1.35not detected
CDC6YJL194W YAP5P40574 245 aa6.6□□□□□ -1.35
CDC6YJL194W MAK11P20484 414 aaKnown RBP6.59□□□□□ -1.35
CDC6YJL194W SAS10Q12136 610 aaPredicted RBP6.56□□□□□ -1.36
CDC6YJL194W YOR238WQ08634 303 aa6.55□□□□□ -1.36
CDC6YJL194W RLF2Q12495 606 aa6.55□□□□□ -1.36
CDC6YJL194W MST1P07236 462 aa6.53□□□□□ -1.36
CDC6YJL194W DBP1P24784 617 aaKnown RBP6.53□□□□□ -1.36
CDC6YJL194W STS1P38637 319 aa6.53□□□□□ -1.36
CDC6YJL194W RPN1P38764 993 aaKnown RBP6.53□□□□□ -1.36
CDC6YJL194W NAP1P25293 417 aaKnown RBP6.5□□□□□ -1.37
CDC6YJL194W SET1P38827 1080 aaKnown RBP6.5□□□□□ -1.37
CDC6YJL194W NOP53Q12080 455 aaKnown RBP6.5□□□□□ -1.37
CDC6YJL194W YBL029C-AQ3E756 94 aa6.5□□□□□ -1.37
CDC6YJL194W IFH1P39520 1085 aa6.47□□□□□ -1.37
CDC6YJL194W YFR006WP43590 535 aa6.47□□□□□ -1.37
CDC6YJL194W COQ8P27697 501 aa6.46□□□□□ -1.37
CDC6YJL194W YPR148CQ06523 435 aa6.44□□□□□ -1.38
CDC6YJL194W PIB1Q06651 286 aa6.44□□□□□ -1.38
CDC6YJL194W VMA1P17255 1071 aaKnown RBP6.43□□□□□ -1.38
CDC6YJL194W MIF2P35201 549 aa6.42□□□□□ -1.38
CDC6YJL194W EDS1P38073 919 aa6.42□□□□□ -1.38
CDC6YJL194W ABP1P15891 592 aaKnown RBP6.4□□□□□ -1.38
CDC6YJL194W GTT3P39996 337 aa6.4□□□□□ -1.38
CDC6YJL194W SAM3Q08986 587 aa6.4□□□□□ -1.38
CDC6YJL194W PTC3P34221 468 aaKnown RBP6.38□□□□□ -1.39
CDC6YJL194W CKB1P43639 278 aa6.37□□□□□ -1.39
CDC6YJL194W IOC4Q04213 475 aa6.37□□□□□ -1.39
CDC6YJL194W VNX1P42839 908 aa6.36□□□□□ -1.39
CDC6YJL194W VPS70P47161 811 aa6.35□□□□□ -1.39
CDC6YJL194W GRE2Q12068 342 aaKnown RBP6.33□□□□□ -1.4
CDC6YJL194W MSB4Q12317 492 aa6.32□□□□□ -1.4
CDC6YJL194W GUT1P32190 709 aa6.31□□□□□ -1.4
CDC6YJL194W GYP5Q12344 894 aa6.31□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 63.5 ms