RNA–Protein interactions for RNA: YIR006C

PAN1, Transcript of Part of actin cytoskeleton-regulatory complex Pan1p-Sla1p-End3p, yeastyeast

Gene PAN1, Length 4,443 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PAN1YIR006C GCR2Q01722 534 aa5.3□□□□□ -1.56
PAN1YIR006C PEX19Q07418 342 aa5.3□□□□□ -1.56
PAN1YIR006C PRP5P21372 849 aaPredicted RBP5.29□□□□□ -1.56
PAN1YIR006C BRN1P38170 754 aa5.29□□□□□ -1.56
PAN1YIR006C REI1P38344 393 aaPredicted RBP5.29□□□□□ -1.56
PAN1YIR006C RPN1P38764 993 aaKnown RBP5.29□□□□□ -1.56
PAN1YIR006C JSN1P47135 1091 aaKnown RBP RIP-Chip data5.29□□□□□ -1.56not detected
PAN1YIR006C YNR029CP53729 429 aaKnown RBP5.29□□□□□ -1.56
PAN1YIR006C PSK2Q08217 1101 aa5.29□□□□□ -1.56
PAN1YIR006C YML133CQ03099 1374 aa5.29□□□□□ -1.56
PAN1YIR006C YLL067CQ07888 1374 aa5.29□□□□□ -1.56
PAN1YIR006C PSH1Q12161 406 aa5.29□□□□□ -1.56
PAN1YIR006C DNF2Q12675 1612 aa5.29□□□□□ -1.56
PAN1YIR006C YLL066CQ99208 1374 aa5.29□□□□□ -1.56
PAN1YIR006C TY1B-BRQ12193 1756 aa5.29□□□□□ -1.56
PAN1YIR006C TY1B-GR3Q12316 1755 aa5.29□□□□□ -1.56
PAN1YIR006C TY1B-ORQ92393 1755 aa5.29□□□□□ -1.56
PAN1YIR006C PSK1P31374 1356 aa5.29□□□□□ -1.56
PAN1YIR006C SWI6P09959 803 aa5.29□□□□□ -1.56
PAN1YIR006C PRX1P34227 261 aaKnown RBP5.29□□□□□ -1.56
PAN1YIR006C DNM1P54861 757 aa5.29□□□□□ -1.56
PAN1YIR006C CIC1P38779 376 aaKnown RBP5.28□□□□□ -1.56
PAN1YIR006C LAM6Q08001 693 aa5.28□□□□□ -1.56
PAN1YIR006C ALE1Q08548 619 aa5.28□□□□□ -1.56
PAN1YIR006C PDR12Q02785 1511 aa5.28□□□□□ -1.56
PAN1YIR006C NOT3P06102 836 aaKnown RBP5.28□□□□□ -1.56
PAN1YIR006C CLB5P30283 435 aa5.28□□□□□ -1.56
PAN1YIR006C XKS1P42826 600 aa5.28□□□□□ -1.56
PAN1YIR006C PWP2P25635 923 aaKnown RBP5.28□□□□□ -1.56
PAN1YIR006C AVT3P36062 692 aa5.28□□□□□ -1.56
PAN1YIR006C APT1P49435 187 aaKnown RBP5.28□□□□□ -1.56
PAN1YIR006C YMR196WQ04336 1088 aa5.28□□□□□ -1.56
PAN1YIR006C CDC11P32458 415 aa5.28□□□□□ -1.56
PAN1YIR006C PRP40P33203 583 aaKnown RBP5.28□□□□□ -1.56
PAN1YIR006C LTV1P34078 463 aa5.28□□□□□ -1.56
PAN1YIR006C MAK10Q02197 733 aa5.28□□□□□ -1.56
PAN1YIR006C SRC1Q03707 834 aa5.28□□□□□ -1.56
PAN1YIR006C CDC37P06101 506 aaKnown RBP5.27□□□□□ -1.57
PAN1YIR006C OMS1Q06668 471 aa5.27□□□□□ -1.57
PAN1YIR006C PPH3P32345 308 aa5.27□□□□□ -1.57
PAN1YIR006C RFC5P38251 354 aa5.27□□□□□ -1.57
PAN1YIR006C HXT13P39924 564 aa5.27□□□□□ -1.57
PAN1YIR006C VID28P40547 921 aa5.27□□□□□ -1.57
PAN1YIR006C JJJ1P53863 590 aa5.27□□□□□ -1.57
PAN1YIR006C UTP14Q04500 899 aaKnown RBP5.27□□□□□ -1.57
PAN1YIR006C TRS33Q99394 268 aa5.27□□□□□ -1.57
PAN1YIR006C TY1B-JR2P47100 1755 aaKnown RBP5.27□□□□□ -1.57
PAN1YIR006C TY1B-ER2Q03619 1755 aa5.27□□□□□ -1.57
PAN1YIR006C TY1B-MR1Q04214 1755 aa5.27□□□□□ -1.57
PAN1YIR006C TY1B-MR2Q04670 1755 aaKnown RBP5.27□□□□□ -1.57
PAN1YIR006C TY1B-LR1Q12088 1755 aaKnown RBP5.27□□□□□ -1.57
PAN1YIR006C TY1B-NL1Q12112 1755 aa5.27□□□□□ -1.57
PAN1YIR006C TY1B-GR1Q12141 1755 aa5.27□□□□□ -1.57
PAN1YIR006C TY1B-BLQ12490 1755 aa5.27□□□□□ -1.57
PAN1YIR006C SMC2P38989 1170 aaKnown RBP5.27□□□□□ -1.57
PAN1YIR006C CTF4Q01454 927 aa5.27□□□□□ -1.57
PAN1YIR006C OPY2Q06810 360 aa5.27□□□□□ -1.57
PAN1YIR006C CDC15P27636 974 aa5.26□□□□□ -1.57
PAN1YIR006C RPS0BP46654 252 aaKnown RBP5.26□□□□□ -1.57
PAN1YIR006C PFK2P16862 959 aaKnown RBP RIP-Chip data5.26□□□□□ -1.57not detected
PAN1YIR006C STU2P46675 888 aa5.26□□□□□ -1.57
PAN1YIR006C HGH1P48362 394 aaKnown RBP5.26□□□□□ -1.57
PAN1YIR006C DOS2P54858 310 aa5.26□□□□□ -1.57
PAN1YIR006C UTP13Q05946 817 aaKnown RBP5.26□□□□□ -1.57
PAN1YIR006C SWI1P09547 1314 aa5.26□□□□□ -1.57
PAN1YIR006C MCM2P29469 868 aa5.26□□□□□ -1.57
PAN1YIR006C RAD26P40352 1085 aa5.26□□□□□ -1.57
PAN1YIR006C HUL5P53119 910 aa5.26□□□□□ -1.57
PAN1YIR006C STO1P34160 861 aaKnown RBP5.26□□□□□ -1.57
PAN1YIR006C SAS3P34218 831 aa5.26□□□□□ -1.57
PAN1YIR006C YLR287CQ05881 355 aa5.26□□□□□ -1.57
PAN1YIR006C PSR2Q07949 397 aa5.26□□□□□ -1.57
PAN1YIR006C YEF3P16521 1044 aaKnown RBP5.25□□□□□ -1.57
PAN1YIR006C YKT6P36015 200 aaKnown RBP5.25□□□□□ -1.57
PAN1YIR006C CTF18P49956 741 aa5.25□□□□□ -1.57
PAN1YIR006C COQ4O13525 335 aa5.25□□□□□ -1.57
PAN1YIR006C MNR2P35724 969 aa5.25□□□□□ -1.57
PAN1YIR006C CST6P40535 587 aa5.25□□□□□ -1.57
PAN1YIR006C RPO41P13433 1351 aaKnown RBP5.25□□□□□ -1.57
PAN1YIR006C HPC2Q01448 625 aa5.25□□□□□ -1.57
PAN1YIR006C GFD1Q04839 188 aaKnown RBP5.25□□□□□ -1.57
PAN1YIR006C SMD2Q06217 110 aaKnown RBP5.25□□□□□ -1.57
PAN1YIR006C RRP6Q12149 733 aaKnown RBP5.25□□□□□ -1.57
PAN1YIR006C OM45P16547 393 aa5.24□□□□□ -1.57
PAN1YIR006C CPS1P27614 576 aa5.24□□□□□ -1.57
PAN1YIR006C SRB4P32569 687 aa5.24□□□□□ -1.57
PAN1YIR006C CWH41P53008 833 aa5.24□□□□□ -1.57
PAN1YIR006C ITT1Q04638 464 aa5.24□□□□□ -1.57
PAN1YIR006C RPN7Q06103 429 aaKnown RBP5.24□□□□□ -1.57
PAN1YIR006C SSP2Q08646 371 aa5.24□□□□□ -1.57
PAN1YIR006C PLP2Q12017 286 aa5.24□□□□□ -1.57
PAN1YIR006C RAD24P32641 659 aa5.24□□□□□ -1.57
PAN1YIR006C NTH2P35172 780 aa5.24□□□□□ -1.57
PAN1YIR006C YGR122WP53272 402 aa5.24□□□□□ -1.57
PAN1YIR006C YGL082WP53155 381 aa5.24□□□□□ -1.57
PAN1YIR006C RTC4P53850 401 aa5.24□□□□□ -1.57
PAN1YIR006C TRM3Q07527 1436 aa5.24□□□□□ -1.57
PAN1YIR006C YKL133CP36066 463 aa5.24□□□□□ -1.57
PAN1YIR006C ALG2P43636 503 aa5.23□□□□□ -1.57
PAN1YIR006C SSF2Q12153 453 aaPredicted RBP5.23□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 11.8 ms