RNA–Protein interactions for RNA: YER138C

YER138C, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YER138C, Length 5,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YER138CYER138C BDF2Q07442 638 aa3.04□□□□□ -1.92
YER138CYER138C BUD31P25337 157 aaPredicted RBP3.04□□□□□ -1.92
YER138CYER138C CBF2P32504 956 aa3.04□□□□□ -1.92
YER138CYER138C FRD1P32614 470 aaKnown RBP3.04□□□□□ -1.92
YER138CYER138C YBR238CP38330 731 aaKnown RBP3.04□□□□□ -1.92
YER138CYER138C RPN3P40016 523 aaKnown RBP3.04□□□□□ -1.92
YER138CYER138C MRK1P50873 501 aa3.04□□□□□ -1.92
YER138CYER138C ESC1Q03661 1658 aaKnown RBP3.04□□□□□ -1.92
YER138CYER138C NUP170P38181 1502 aa3.04□□□□□ -1.92
YER138CYER138C CAT8P39113 1433 aa3.03□□□□□ -1.92
YER138CYER138C IDI1P15496 288 aa3.03□□□□□ -1.92
YER138CYER138C SEC8P32855 1065 aa3.03□□□□□ -1.92
YER138CYER138C SSF1P38789 453 aaPredicted RBP3.03□□□□□ -1.92
YER138CYER138C RSM26P47141 266 aa3.03□□□□□ -1.92
YER138CYER138C COS5P47187 383 aa3.03□□□□□ -1.92
YER138CYER138C FAA4P47912 694 aaKnown RBP3.03□□□□□ -1.92
YER138CYER138C KIP3P53086 805 aaKnown RBP3.03□□□□□ -1.92
YER138CYER138C DNM1P54861 757 aa3.03□□□□□ -1.92
YER138CYER138C SKY1Q03656 742 aa3.03□□□□□ -1.92
YER138CYER138C SPO71Q03868 1245 aa3.03□□□□□ -1.92
YER138CYER138C RVB2Q12464 471 aaKnown RBP3.03□□□□□ -1.92
YER138CYER138C FBP1P09201 348 aa3.03□□□□□ -1.92
YER138CYER138C ATG19P35193 415 aa3.03□□□□□ -1.92
YER138CYER138C DOT5P40553 215 aa3.03□□□□□ -1.92
YER138CYER138C CIT3P43635 486 aa3.03□□□□□ -1.92
YER138CYER138C ZDS1P50111 915 aaKnown RBP3.03□□□□□ -1.92
YER138CYER138C CNM67P53865 581 aaKnown RBP3.03□□□□□ -1.92
YER138CYER138C GIN4Q12263 1142 aa3.03□□□□□ -1.92
YER138CYER138C SNA3P14359 133 aa3.03□□□□□ -1.92
YER138CYER138C TCA17P32613 152 aa3.03□□□□□ -1.92
YER138CYER138C FPK1P53739 893 aa3.03□□□□□ -1.92
YER138CYER138C OSW2Q12202 724 aa3.03□□□□□ -1.92
YER138CYER138C PIF1P07271 859 aa3.02□□□□□ -1.93
YER138CYER138C STE11P23561 717 aa3.02□□□□□ -1.93
YER138CYER138C DLD1P32891 587 aa3.02□□□□□ -1.93
YER138CYER138C MAK5P38112 773 aaPredicted RBP3.02□□□□□ -1.93
YER138CYER138C SAP185P40856 1058 aa3.02□□□□□ -1.93
YER138CYER138C NNF1P47149 201 aa3.02□□□□□ -1.93
YER138CYER138C FMP30Q02883 468 aa3.02□□□□□ -1.93
YER138CYER138C RAD50P12753 1312 aa3.02□□□□□ -1.93
YER138CYER138C MYO4P32492 1471 aa3.02□□□□□ -1.93
YER138CYER138C ERG12P07277 443 aa3.02□□□□□ -1.93
YER138CYER138C VPS45P38932 577 aa3.02□□□□□ -1.93
YER138CYER138C SAK1P38990 1142 aa3.02□□□□□ -1.93
YER138CYER138C URB2P47108 1174 aa3.02□□□□□ -1.93
YER138CYER138C IQG1Q12280 1495 aa3.02□□□□□ -1.93
YER138CYER138C YLR419WQ06698 1435 aaKnown RBP3.02□□□□□ -1.93
YER138CYER138C SHE3P38272 425 aaKnown RBP3.02□□□□□ -1.93
YER138CYER138C DSN1P40568 576 aa3.02□□□□□ -1.93
YER138CYER138C VID27P40157 782 aa3.02□□□□□ -1.93
YER138CYER138C VTC4P47075 721 aa3.02□□□□□ -1.93
YER138CYER138C ACK1Q07622 623 aaPredicted RBP3.02□□□□□ -1.93
YER138CYER138C CDC19P00549 500 aaKnown RBP3.01□□□□□ -1.93
YER138CYER138C CLC1P17891 233 aa3.01□□□□□ -1.93
YER138CYER138C CLN2P20438 545 aa3.01□□□□□ -1.93
YER138CYER138C CAB1Q04430 367 aa3.01□□□□□ -1.93
YER138CYER138C BI4P03879 638 aa3.01□□□□□ -1.93
YER138CYER138C DCD1P06773 312 aa3.01□□□□□ -1.93
YER138CYER138C RPG1P38249 964 aaKnown RBP3.01□□□□□ -1.93
YER138CYER138C NUG1P40010 520 aaKnown RBP3.01□□□□□ -1.93
YER138CYER138C FYV10P40492 516 aa3.01□□□□□ -1.93
YER138CYER138C RPN11P43588 306 aaKnown RBP3.01□□□□□ -1.93
YER138CYER138C SEC14P24280 304 aaKnown RBP3.01□□□□□ -1.93
YER138CYER138C RTC4P53850 401 aa3.01□□□□□ -1.93
YER138CYER138C PTC3P34221 468 aaKnown RBP3.01□□□□□ -1.93
YER138CYER138C OYE3P41816 400 aaPredicted RBP3.01□□□□□ -1.93
YER138CYER138C YFR018CP43599 363 aa3.01□□□□□ -1.93
YER138CYER138C TRM44Q02648 567 aaKnown RBP3.01□□□□□ -1.93
YER138CYER138C HEH2Q03281 663 aa3.01□□□□□ -1.93
YER138CYER138C CEF1Q03654 590 aaPredicted RBP3.01□□□□□ -1.93
YER138CYER138C NSE5Q03718 556 aa3.01□□□□□ -1.93
YER138CYER138C YCG1Q06680 1035 aa3.01□□□□□ -1.93
YER138CYER138C YRF1-4O13559 1382 aa3.01□□□□□ -1.93
YER138CYER138C UTP9P38882 575 aaKnown RBP3□□□□□ -1.93
YER138CYER138C CSM2P40465 213 aa3□□□□□ -1.93
YER138CYER138C CIR1P42940 261 aa3□□□□□ -1.93
YER138CYER138C TFB3Q03290 321 aa3□□□□□ -1.93
YER138CYER138C GAS4Q08271 471 aa3□□□□□ -1.93
YER138CYER138C HFI1Q12060 488 aa3□□□□□ -1.93
YER138CYER138C MAM3Q12296 706 aa3□□□□□ -1.93
YER138CYER138C VPS5Q92331 675 aa3□□□□□ -1.93
YER138CYER138C GLN1P32288 370 aaKnown RBP3□□□□□ -1.93
YER138CYER138C SRF1Q12516 437 aa3□□□□□ -1.93
YER138CYER138C COQ8P27697 501 aa3□□□□□ -1.93
YER138CYER138C YTA6P40328 754 aa3□□□□□ -1.93
YER138CYER138C BRE2P43132 505 aa3□□□□□ -1.93
YER138CYER138C NPA3P47122 385 aa3□□□□□ -1.93
YER138CYER138C DNF1P32660 1571 aa3□□□□□ -1.93
YER138CYER138C ACE2P21192 770 aa3□□□□□ -1.93
YER138CYER138C DSF2P38213 736 aa3□□□□□ -1.93
YER138CYER138C PBY1P38254 753 aa3□□□□□ -1.93
YER138CYER138C SCD6P45978 349 aaKnown RBP RIP-Chip data3□□□□□ -1.93not detected
YER138CYER138C THS1P04801 734 aaKnown RBP2.99□□□□□ -1.93
YER138CYER138C MLS1P30952 554 aa2.99□□□□□ -1.93
YER138CYER138C PSF2P40359 213 aa2.99□□□□□ -1.93
YER138CYER138C YPR084WQ06821 456 aa2.99□□□□□ -1.93
YER138CYER138C RTG3P38165 486 aa2.99□□□□□ -1.93
YER138CYER138C SAH1P39954 449 aaKnown RBP2.99□□□□□ -1.93
YER138CYER138C VTC2P43585 828 aa2.99□□□□□ -1.93
YER138CYER138C MDR1P53258 950 aa2.99□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms