RNA–Protein interactions for RNA: YEL031W

SPF1, Transcript of P-type ATPase, ion transporter of the ER membrane, yeastyeast

Gene SPF1, Length 3,648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPF1YEL031W VPS72Q03388 795 aa2.74□□□□□ -1.97
SPF1YEL031W RAD3P06839 778 aa2.73□□□□□ -1.97
SPF1YEL031W PRD1P25375 712 aa2.73□□□□□ -1.97
SPF1YEL031W HOS4P40480 1083 aa2.73□□□□□ -1.97
SPF1YEL031W CIR1P42940 261 aa2.73□□□□□ -1.97
SPF1YEL031W ARP5P53946 755 aa2.73□□□□□ -1.97
SPF1YEL031W IML1P47170 1584 aa2.73□□□□□ -1.97
SPF1YEL031W KAR3P17119 729 aa2.73□□□□□ -1.97
SPF1YEL031W PDI1P17967 522 aaKnown RBP2.73□□□□□ -1.97
SPF1YEL031W VPS41P38959 992 aa2.73□□□□□ -1.97
SPF1YEL031W SWI1P09547 1314 aa2.73□□□□□ -1.97
SPF1YEL031W YEL043WP32618 956 aa2.73□□□□□ -1.97
SPF1YEL031W CCT5P40413 562 aaKnown RBP2.73□□□□□ -1.97
SPF1YEL031W KRE33P53914 1056 aaKnown RBP2.73□□□□□ -1.97
SPF1YEL031W EIS1Q05050 843 aaKnown RBP2.73□□□□□ -1.97
SPF1YEL031W UTP13Q05946 817 aaKnown RBP2.73□□□□□ -1.97
SPF1YEL031W YRF1-2P40105 1681 aa2.73□□□□□ -1.97
SPF1YEL031W NUP192P47054 1683 aa2.72□□□□□ -1.97
SPF1YEL031W TRK1P12685 1235 aa2.72□□□□□ -1.97
SPF1YEL031W SPB4P25808 606 aaPredicted RBP2.72□□□□□ -1.97
SPF1YEL031W JSN1P47135 1091 aaKnown RBP RIP-Chip data2.72□□□□□ -1.97not detected
SPF1YEL031W PXR1P53335 271 aaPredicted RBP2.72□□□□□ -1.97
SPF1YEL031W HEF3P53978 1044 aaKnown RBP2.72□□□□□ -1.97
SPF1YEL031W SML1Q04964 104 aa2.72□□□□□ -1.97
SPF1YEL031W HRQ1Q05549 1077 aa2.72□□□□□ -1.97
SPF1YEL031W OMS1Q06668 471 aa2.72□□□□□ -1.97
SPF1YEL031W YCG1Q06680 1035 aa2.72□□□□□ -1.97
SPF1YEL031W PEX19Q07418 342 aa2.72□□□□□ -1.97
SPF1YEL031W YEF3P16521 1044 aaKnown RBP2.72□□□□□ -1.97
SPF1YEL031W MSH3P25336 1018 aa2.72□□□□□ -1.97
SPF1YEL031W MAM1P40065 302 aa2.72□□□□□ -1.97
SPF1YEL031W MVP1P40959 511 aaKnown RBP2.72□□□□□ -1.97
SPF1YEL031W RPN7Q06103 429 aaKnown RBP2.72□□□□□ -1.97
SPF1YEL031W NKP2Q06162 153 aa2.72□□□□□ -1.97
SPF1YEL031W RLP24Q07915 199 aaKnown RBP2.72□□□□□ -1.97
SPF1YEL031W MLP1Q02455 1875 aaKnown RBP2.72□□□□□ -1.97
SPF1YEL031W PSK1P31374 1356 aa2.72□□□□□ -1.97
SPF1YEL031W CDC27P38042 758 aa2.72□□□□□ -1.97
SPF1YEL031W PXA1P41909 870 aa2.72□□□□□ -1.97
SPF1YEL031W CWH41P53008 833 aa2.72□□□□□ -1.97
SPF1YEL031W MAL13P53338 473 aa2.72□□□□□ -1.97
SPF1YEL031W PAP2P53632 584 aaKnown RBP2.72□□□□□ -1.97
SPF1YEL031W DOS2P54858 310 aa2.72□□□□□ -1.97
SPF1YEL031W VPS20Q04272 221 aa2.72□□□□□ -1.97
SPF1YEL031W RRP15Q06511 250 aaPredicted RBP2.72□□□□□ -1.97
SPF1YEL031W TFC8Q12308 588 aa2.72□□□□□ -1.97
SPF1YEL031W STE11P23561 717 aa2.71□□□□□ -1.98
SPF1YEL031W SIC1P38634 284 aa2.71□□□□□ -1.98
SPF1YEL031W YGL140CP53120 1219 aa2.71□□□□□ -1.98
SPF1YEL031W THI22Q06490 572 aa2.71□□□□□ -1.98
SPF1YEL031W PSK2Q08217 1101 aa2.71□□□□□ -1.98
SPF1YEL031W TY4A-HQ6Q5P6 413 aa2.71□□□□□ -1.98
SPF1YEL031W TRL1P09880 827 aaKnown RBP2.71□□□□□ -1.98
SPF1YEL031W MSH1P25846 959 aa2.71□□□□□ -1.98
SPF1YEL031W DPB3P27344 201 aa2.71□□□□□ -1.98
SPF1YEL031W RFC1P38630 861 aaKnown RBP2.71□□□□□ -1.98
SPF1YEL031W VPS8P39702 1274 aa2.71□□□□□ -1.98
SPF1YEL031W GYP7P48365 746 aa2.71□□□□□ -1.98
SPF1YEL031W TRP5P00931 707 aaKnown RBP2.7□□□□□ -1.98
SPF1YEL031W RPL19AP0CX82 189 aaKnown RBP2.7□□□□□ -1.98
SPF1YEL031W RPL19BP0CX83 189 aaPredicted RBP2.7□□□□□ -1.98
SPF1YEL031W MRPS28P21771 286 aa2.7□□□□□ -1.98
SPF1YEL031W RAM2P29703 316 aa2.7□□□□□ -1.98
SPF1YEL031W MFT1P33441 392 aaKnown RBP2.7□□□□□ -1.98
SPF1YEL031W SLD2P34252 453 aa2.7□□□□□ -1.98
SPF1YEL031W SQT1P35184 431 aa2.7□□□□□ -1.98
SPF1YEL031W YNG2P38806 282 aaKnown RBP2.7□□□□□ -1.98
SPF1YEL031W CAJ1P39101 391 aa2.7□□□□□ -1.98
SPF1YEL031W NPA3P47122 385 aa2.7□□□□□ -1.98
SPF1YEL031W UBP10P53874 792 aaPredicted RBP2.7□□□□□ -1.98
SPF1YEL031W TIM50Q02776 476 aa2.7□□□□□ -1.98
SPF1YEL031W TAF8Q03750 510 aa2.7□□□□□ -1.98
SPF1YEL031W COG4Q06096 861 aa2.7□□□□□ -1.98
SPF1YEL031W RUD3Q12234 484 aaKnown RBP2.7□□□□□ -1.98
SPF1YEL031W SES1P07284 462 aaKnown RBP2.7□□□□□ -1.98
SPF1YEL031W NPR3P38742 1146 aa2.7□□□□□ -1.98
SPF1YEL031W SAP1P39955 897 aaKnown RBP2.7□□□□□ -1.98
SPF1YEL031W SPO22P40511 975 aa2.7□□□□□ -1.98
SPF1YEL031W BTN2P53286 410 aa2.7□□□□□ -1.98
SPF1YEL031W APC11Q12157 165 aa2.7□□□□□ -1.98
SPF1YEL031W SMC6Q12749 1114 aa2.7□□□□□ -1.98
SPF1YEL031W VAS1P07806 1104 aaKnown RBP2.7□□□□□ -1.98
SPF1YEL031W RPS0AP32905 252 aaKnown RBP2.7□□□□□ -1.98
SPF1YEL031W SPT8P38915 602 aa2.7□□□□□ -1.98
SPF1YEL031W ALD4P46367 519 aaKnown RBP2.7□□□□□ -1.98
SPF1YEL031W ILM1P47155 203 aa2.7□□□□□ -1.98
SPF1YEL031W YSH1Q06224 779 aaPredicted RBP2.7□□□□□ -1.98
SPF1YEL031W BMS1Q08965 1183 aaKnown RBP2.7□□□□□ -1.98
SPF1YEL031W TY1B-NL2Q99337 1749 aaKnown RBP2.7□□□□□ -1.98
SPF1YEL031W CDC16P09798 840 aa2.69□□□□□ -1.98
SPF1YEL031W SAP190P36123 1033 aa2.69□□□□□ -1.98
SPF1YEL031W RRM3P38766 723 aa2.69□□□□□ -1.98
SPF1YEL031W PRP31P49704 494 aaPredicted RBP2.69□□□□□ -1.98
SPF1YEL031W FAR11P53917 953 aa2.69□□□□□ -1.98
SPF1YEL031W ATG9Q12142 997 aa2.69□□□□□ -1.98
SPF1YEL031W PSH1Q12161 406 aa2.69□□□□□ -1.98
SPF1YEL031W RPO41P13433 1351 aaKnown RBP2.69□□□□□ -1.98
SPF1YEL031W BCK1Q01389 1478 aa2.69□□□□□ -1.98
SPF1YEL031W RPL22AP05749 121 aaKnown RBP2.69□□□□□ -1.98
SPF1YEL031W RIA1P53893 1110 aa2.69□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 133.5 ms