RNA–Protein interactions for RNA: YDR316W-B

YDR316W-B, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YDR316W-B, Length 5,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR316W-BYDR316W-B BDF2Q07442 638 aa3.04□□□□□ -1.92
YDR316W-BYDR316W-B BUD31P25337 157 aaPredicted RBP3.04□□□□□ -1.92
YDR316W-BYDR316W-B CBF2P32504 956 aa3.04□□□□□ -1.92
YDR316W-BYDR316W-B FRD1P32614 470 aaKnown RBP3.04□□□□□ -1.92
YDR316W-BYDR316W-B YBR238CP38330 731 aaKnown RBP3.04□□□□□ -1.92
YDR316W-BYDR316W-B RPN3P40016 523 aaKnown RBP3.04□□□□□ -1.92
YDR316W-BYDR316W-B MRK1P50873 501 aa3.04□□□□□ -1.92
YDR316W-BYDR316W-B ESC1Q03661 1658 aaKnown RBP3.04□□□□□ -1.92
YDR316W-BYDR316W-B NUP170P38181 1502 aa3.04□□□□□ -1.92
YDR316W-BYDR316W-B CAT8P39113 1433 aa3.03□□□□□ -1.92
YDR316W-BYDR316W-B IDI1P15496 288 aa3.03□□□□□ -1.92
YDR316W-BYDR316W-B SEC8P32855 1065 aa3.03□□□□□ -1.92
YDR316W-BYDR316W-B SSF1P38789 453 aaPredicted RBP3.03□□□□□ -1.92
YDR316W-BYDR316W-B RSM26P47141 266 aa3.03□□□□□ -1.92
YDR316W-BYDR316W-B COS5P47187 383 aa3.03□□□□□ -1.92
YDR316W-BYDR316W-B FAA4P47912 694 aaKnown RBP3.03□□□□□ -1.92
YDR316W-BYDR316W-B KIP3P53086 805 aaKnown RBP3.03□□□□□ -1.92
YDR316W-BYDR316W-B DNM1P54861 757 aa3.03□□□□□ -1.92
YDR316W-BYDR316W-B SKY1Q03656 742 aa3.03□□□□□ -1.92
YDR316W-BYDR316W-B SPO71Q03868 1245 aa3.03□□□□□ -1.92
YDR316W-BYDR316W-B RVB2Q12464 471 aaKnown RBP3.03□□□□□ -1.92
YDR316W-BYDR316W-B FBP1P09201 348 aa3.03□□□□□ -1.92
YDR316W-BYDR316W-B ATG19P35193 415 aa3.03□□□□□ -1.92
YDR316W-BYDR316W-B DOT5P40553 215 aa3.03□□□□□ -1.92
YDR316W-BYDR316W-B CIT3P43635 486 aa3.03□□□□□ -1.92
YDR316W-BYDR316W-B ZDS1P50111 915 aaKnown RBP3.03□□□□□ -1.92
YDR316W-BYDR316W-B CNM67P53865 581 aaKnown RBP3.03□□□□□ -1.92
YDR316W-BYDR316W-B GIN4Q12263 1142 aa3.03□□□□□ -1.92
YDR316W-BYDR316W-B SNA3P14359 133 aa3.03□□□□□ -1.92
YDR316W-BYDR316W-B TCA17P32613 152 aa3.03□□□□□ -1.92
YDR316W-BYDR316W-B FPK1P53739 893 aa3.03□□□□□ -1.92
YDR316W-BYDR316W-B OSW2Q12202 724 aa3.03□□□□□ -1.92
YDR316W-BYDR316W-B PIF1P07271 859 aa3.02□□□□□ -1.93
YDR316W-BYDR316W-B STE11P23561 717 aa3.02□□□□□ -1.93
YDR316W-BYDR316W-B DLD1P32891 587 aa3.02□□□□□ -1.93
YDR316W-BYDR316W-B MAK5P38112 773 aaPredicted RBP3.02□□□□□ -1.93
YDR316W-BYDR316W-B SAP185P40856 1058 aa3.02□□□□□ -1.93
YDR316W-BYDR316W-B NNF1P47149 201 aa3.02□□□□□ -1.93
YDR316W-BYDR316W-B FMP30Q02883 468 aa3.02□□□□□ -1.93
YDR316W-BYDR316W-B RAD50P12753 1312 aa3.02□□□□□ -1.93
YDR316W-BYDR316W-B MYO4P32492 1471 aa3.02□□□□□ -1.93
YDR316W-BYDR316W-B ERG12P07277 443 aa3.02□□□□□ -1.93
YDR316W-BYDR316W-B VPS45P38932 577 aa3.02□□□□□ -1.93
YDR316W-BYDR316W-B SAK1P38990 1142 aa3.02□□□□□ -1.93
YDR316W-BYDR316W-B URB2P47108 1174 aa3.02□□□□□ -1.93
YDR316W-BYDR316W-B IQG1Q12280 1495 aa3.02□□□□□ -1.93
YDR316W-BYDR316W-B YLR419WQ06698 1435 aaKnown RBP3.02□□□□□ -1.93
YDR316W-BYDR316W-B SHE3P38272 425 aaKnown RBP3.02□□□□□ -1.93
YDR316W-BYDR316W-B DSN1P40568 576 aa3.02□□□□□ -1.93
YDR316W-BYDR316W-B VID27P40157 782 aa3.02□□□□□ -1.93
YDR316W-BYDR316W-B VTC4P47075 721 aa3.02□□□□□ -1.93
YDR316W-BYDR316W-B ACK1Q07622 623 aaPredicted RBP3.02□□□□□ -1.93
YDR316W-BYDR316W-B CDC19P00549 500 aaKnown RBP3.01□□□□□ -1.93
YDR316W-BYDR316W-B CLC1P17891 233 aa3.01□□□□□ -1.93
YDR316W-BYDR316W-B CLN2P20438 545 aa3.01□□□□□ -1.93
YDR316W-BYDR316W-B CAB1Q04430 367 aa3.01□□□□□ -1.93
YDR316W-BYDR316W-B BI4P03879 638 aa3.01□□□□□ -1.93
YDR316W-BYDR316W-B DCD1P06773 312 aa3.01□□□□□ -1.93
YDR316W-BYDR316W-B RPG1P38249 964 aaKnown RBP3.01□□□□□ -1.93
YDR316W-BYDR316W-B NUG1P40010 520 aaKnown RBP3.01□□□□□ -1.93
YDR316W-BYDR316W-B FYV10P40492 516 aa3.01□□□□□ -1.93
YDR316W-BYDR316W-B RPN11P43588 306 aaKnown RBP3.01□□□□□ -1.93
YDR316W-BYDR316W-B SEC14P24280 304 aaKnown RBP3.01□□□□□ -1.93
YDR316W-BYDR316W-B RTC4P53850 401 aa3.01□□□□□ -1.93
YDR316W-BYDR316W-B PTC3P34221 468 aaKnown RBP3.01□□□□□ -1.93
YDR316W-BYDR316W-B OYE3P41816 400 aaPredicted RBP3.01□□□□□ -1.93
YDR316W-BYDR316W-B YFR018CP43599 363 aa3.01□□□□□ -1.93
YDR316W-BYDR316W-B TRM44Q02648 567 aaKnown RBP3.01□□□□□ -1.93
YDR316W-BYDR316W-B HEH2Q03281 663 aa3.01□□□□□ -1.93
YDR316W-BYDR316W-B CEF1Q03654 590 aaPredicted RBP3.01□□□□□ -1.93
YDR316W-BYDR316W-B NSE5Q03718 556 aa3.01□□□□□ -1.93
YDR316W-BYDR316W-B YCG1Q06680 1035 aa3.01□□□□□ -1.93
YDR316W-BYDR316W-B YRF1-4O13559 1382 aa3.01□□□□□ -1.93
YDR316W-BYDR316W-B UTP9P38882 575 aaKnown RBP3□□□□□ -1.93
YDR316W-BYDR316W-B CSM2P40465 213 aa3□□□□□ -1.93
YDR316W-BYDR316W-B CIR1P42940 261 aa3□□□□□ -1.93
YDR316W-BYDR316W-B TFB3Q03290 321 aa3□□□□□ -1.93
YDR316W-BYDR316W-B GAS4Q08271 471 aa3□□□□□ -1.93
YDR316W-BYDR316W-B HFI1Q12060 488 aa3□□□□□ -1.93
YDR316W-BYDR316W-B MAM3Q12296 706 aa3□□□□□ -1.93
YDR316W-BYDR316W-B VPS5Q92331 675 aa3□□□□□ -1.93
YDR316W-BYDR316W-B GLN1P32288 370 aaKnown RBP3□□□□□ -1.93
YDR316W-BYDR316W-B SRF1Q12516 437 aa3□□□□□ -1.93
YDR316W-BYDR316W-B COQ8P27697 501 aa3□□□□□ -1.93
YDR316W-BYDR316W-B YTA6P40328 754 aa3□□□□□ -1.93
YDR316W-BYDR316W-B BRE2P43132 505 aa3□□□□□ -1.93
YDR316W-BYDR316W-B NPA3P47122 385 aa3□□□□□ -1.93
YDR316W-BYDR316W-B DNF1P32660 1571 aa3□□□□□ -1.93
YDR316W-BYDR316W-B ACE2P21192 770 aa3□□□□□ -1.93
YDR316W-BYDR316W-B DSF2P38213 736 aa3□□□□□ -1.93
YDR316W-BYDR316W-B PBY1P38254 753 aa3□□□□□ -1.93
YDR316W-BYDR316W-B SCD6P45978 349 aaKnown RBP RIP-Chip data3□□□□□ -1.93not detected
YDR316W-BYDR316W-B THS1P04801 734 aaKnown RBP2.99□□□□□ -1.93
YDR316W-BYDR316W-B MLS1P30952 554 aa2.99□□□□□ -1.93
YDR316W-BYDR316W-B PSF2P40359 213 aa2.99□□□□□ -1.93
YDR316W-BYDR316W-B YPR084WQ06821 456 aa2.99□□□□□ -1.93
YDR316W-BYDR316W-B RTG3P38165 486 aa2.99□□□□□ -1.93
YDR316W-BYDR316W-B SAH1P39954 449 aaKnown RBP2.99□□□□□ -1.93
YDR316W-BYDR316W-B VTC2P43585 828 aa2.99□□□□□ -1.93
YDR316W-BYDR316W-B MDR1P53258 950 aa2.99□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 43.4 ms