RNA–Protein interactions for RNA: YDR206W

EBS1, Transcript of Protein involved in translation inhibition and nonsense-mediated decay, yeast

Gene EBS1, Length 2,655 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
EBS1	YDR206W	ALG12	P53730	551 aa		4.64	□□□□□ -1.67
EBS1	YDR206W	RPN4	Q03465	531 aa		4.64	□□□□□ -1.67
EBS1	YDR206W	VAC17	P25591	423 aa		4.63	□□□□□ -1.67
EBS1	YDR206W	HDA3	Q06623	655 aa		4.63	□□□□□ -1.67
EBS1	YDR206W	EAP1	P36041	632 aa	Known RBP	4.63	□□□□□ -1.67
EBS1	YDR206W	YBR197C	P38306	217 aa		4.63	□□□□□ -1.67
EBS1	YDR206W	YJR008W	P47085	338 aa		4.63	□□□□□ -1.67
EBS1	YDR206W	ALR1	Q08269	859 aa		4.63	□□□□□ -1.67
EBS1	YDR206W	NGR1	P32831	672 aa	Known RBP	4.62	□□□□□ -1.67
EBS1	YDR206W	CAB1	Q04430	367 aa		4.62	□□□□□ -1.67
EBS1	YDR206W	NSE3	Q05541	303 aa		4.62	□□□□□ -1.67
EBS1	YDR206W	ISR1	Q06098	443 aa	Known RBP	4.62	□□□□□ -1.67
EBS1	YDR206W	WSC3	Q12215	556 aa		4.62	□□□□□ -1.67
EBS1	YDR206W	TRS33	Q99394	268 aa		4.62	□□□□□ -1.67
EBS1	YDR206W	RPB10	P22139	70 aa		4.62	□□□□□ -1.67
EBS1	YDR206W	SRP40	P32583	406 aa	Predicted RBP	4.62	□□□□□ -1.67
EBS1	YDR206W	UBX5	Q06682	500 aa		4.62	□□□□□ -1.67
EBS1	YDR206W	BUD20	Q08004	166 aa	Predicted RBP	4.62	□□□□□ -1.67
EBS1	YDR206W	NTH2	P35172	780 aa		4.61	□□□□□ -1.67
EBS1	YDR206W	IOC2	Q12072	812 aa		4.61	□□□□□ -1.67
EBS1	YDR206W	PPG1	P32838	368 aa		4.6	□□□□□ -1.67
EBS1	YDR206W	YKL091C	P33324	310 aa	Known RBP	4.6	□□□□□ -1.67
EBS1	YDR206W	RPS26A	P39938	119 aa	Known RBP	4.6	□□□□□ -1.67
EBS1	YDR206W	RPS26B	P39939	119 aa	Known RBP	4.6	□□□□□ -1.67
EBS1	YDR206W	NUG1	P40010	520 aa	Known RBP	4.6	□□□□□ -1.67
EBS1	YDR206W	SWE1	P32944	819 aa		4.6	□□□□□ -1.67
EBS1	YDR206W	SPR3	P41901	512 aa		4.6	□□□□□ -1.67
EBS1	YDR206W	YDR344C	Q05510	147 aa		4.6	□□□□□ -1.67
EBS1	YDR206W	BDF2	Q07442	638 aa		4.6	□□□□□ -1.67
EBS1	YDR206W	CYC8	P14922	966 aa		4.59	□□□□□ -1.67
EBS1	YDR206W	NPL4	P33755	580 aa		4.59	□□□□□ -1.67
EBS1	YDR206W	RRP14	P36080	434 aa	Known RBP	4.59	□□□□□ -1.67
EBS1	YDR206W	HXT10	P43581	546 aa		4.59	□□□□□ -1.67
EBS1	YDR206W	RMD1	Q03441	430 aa		4.59	□□□□□ -1.67
EBS1	YDR206W	GCD11	P32481	527 aa	Known RBP	4.59	□□□□□ -1.67
EBS1	YDR206W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.59	□□□□□ -1.67	not detected
EBS1	YDR206W	TPD3	P31383	635 aa		4.59	□□□□□ -1.68
EBS1	YDR206W	ISC10	P32645	267 aa		4.59	□□□□□ -1.68
EBS1	YDR206W	TOM20	P35180	183 aa		4.58	□□□□□ -1.68
EBS1	YDR206W	FPR3	P38911	411 aa	Known RBP	4.58	□□□□□ -1.68
EBS1	YDR206W	MAD1	P40957	749 aa		4.58	□□□□□ -1.68
EBS1	YDR206W	YGR122W	P53272	402 aa		4.58	□□□□□ -1.68
EBS1	YDR206W	RTS3	P53289	263 aa		4.58	□□□□□ -1.68
EBS1	YDR206W	PPM2	Q08282	695 aa		4.58	□□□□□ -1.68
EBS1	YDR206W	CYT1	P07143	309 aa		4.58	□□□□□ -1.68
EBS1	YDR206W	MOD5	P07884	428 aa		4.58	□□□□□ -1.68
EBS1	YDR206W	SWI5	P08153	709 aa		4.58	□□□□□ -1.68
EBS1	YDR206W	RPS6A	P0CX37	236 aa	Known RBP	4.58	□□□□□ -1.68
EBS1	YDR206W	RPS6B	P0CX38	236 aa	Predicted RBP	4.58	□□□□□ -1.68
EBS1	YDR206W	YFL034W	P43564	1073 aa		4.58	□□□□□ -1.68
EBS1	YDR206W	YJL049W	P47048	450 aa		4.58	□□□□□ -1.68
EBS1	YDR206W	TCB3	Q03640	1545 aa	Known RBP	4.57	□□□□□ -1.68
EBS1	YDR206W	TSR4	P25040	408 aa		4.57	□□□□□ -1.68
EBS1	YDR206W	RRD1	P40454	393 aa	Known RBP	4.57	□□□□□ -1.68
EBS1	YDR206W	VNX1	P42839	908 aa		4.57	□□□□□ -1.68
EBS1	YDR206W	YPR015C	Q12531	247 aa		4.57	□□□□□ -1.68
EBS1	YDR206W	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.57	□□□□□ -1.68	not detected
EBS1	YDR206W	GRX4	P32642	244 aa		4.57	□□□□□ -1.68
EBS1	YDR206W	ULI1	P43604	169 aa		4.57	□□□□□ -1.68
EBS1	YDR206W	UFD2	P54860	961 aa		4.57	□□□□□ -1.68
EBS1	YDR206W	ELP4	Q02884	456 aa	Known RBP	4.57	□□□□□ -1.68
EBS1	YDR206W	ATG20	Q07528	640 aa		4.57	□□□□□ -1.68
EBS1	YDR206W	HXK1	P04806	485 aa	Known RBP	4.56	□□□□□ -1.68
EBS1	YDR206W	HXT5	P38695	592 aa		4.56	□□□□□ -1.68
EBS1	YDR206W	RTT106	P40161	455 aa		4.56	□□□□□ -1.68
EBS1	YDR206W	YNL035C	P53962	389 aa	Known RBP	4.56	□□□□□ -1.68
EBS1	YDR206W	CDC55	Q00362	526 aa		4.56	□□□□□ -1.68
EBS1	YDR206W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.56	□□□□□ -1.68	not detected
EBS1	YDR206W	ESF1	Q06344	628 aa	Known RBP	4.56	□□□□□ -1.68
EBS1	YDR206W	YBL029C-A	Q3E756	94 aa		4.56	□□□□□ -1.68
EBS1	YDR206W	VPS35	P34110	944 aa		4.56	□□□□□ -1.68
EBS1	YDR206W	FAA3	P39002	694 aa		4.56	□□□□□ -1.68
EBS1	YDR206W	WRS1	Q12109	432 aa	Known RBP	4.56	□□□□□ -1.68
EBS1	YDR206W	CLN2	P20438	545 aa		4.55	□□□□□ -1.68
EBS1	YDR206W	GRX1	P25373	110 aa	Known RBP	4.55	□□□□□ -1.68
EBS1	YDR206W	YNL011C	P53980	444 aa		4.55	□□□□□ -1.68
EBS1	YDR206W	CDC53	Q12018	815 aa	Known RBP	4.55	□□□□□ -1.68
EBS1	YDR206W	RAD2	P07276	1031 aa		4.55	□□□□□ -1.68
EBS1	YDR206W	GCD6	P32501	712 aa	Known RBP	4.55	□□□□□ -1.68
EBS1	YDR206W	MNR2	P35724	969 aa		4.55	□□□□□ -1.68
EBS1	YDR206W	RRN7	P40992	514 aa		4.55	□□□□□ -1.68
EBS1	YDR206W	FOX2	Q02207	900 aa	Known RBP	4.55	□□□□□ -1.68
EBS1	YDR206W	HAP5	Q02516	242 aa		4.55	□□□□□ -1.68
EBS1	YDR206W	TIF11	P38912	153 aa	Known RBP	4.54	□□□□□ -1.68
EBS1	YDR206W	KXD1	P53158	218 aa		4.54	□□□□□ -1.68
EBS1	YDR206W	BDS1	Q08347	646 aa		4.54	□□□□□ -1.68
EBS1	YDR206W	PEP7	P32609	515 aa		4.54	□□□□□ -1.68
EBS1	YDR206W	DUT1	P33317	147 aa		4.54	□□□□□ -1.68
EBS1	YDR206W	PET112	P33893	541 aa		4.54	□□□□□ -1.68
EBS1	YDR206W	SGS1	P35187	1447 aa		4.54	□□□□□ -1.68
EBS1	YDR206W	TFG1	P41895	735 aa	Predicted RBP	4.54	□□□□□ -1.68
EBS1	YDR206W	OSW7	P43611	510 aa		4.54	□□□□□ -1.68
EBS1	YDR206W	HUL5	P53119	910 aa		4.54	□□□□□ -1.68
EBS1	YDR206W	TY1B-DR4	Q07793	1604 aa		4.54	□□□□□ -1.68
EBS1	YDR206W	YHR020W	P38708	688 aa	Known RBP	4.53	□□□□□ -1.68
EBS1	YDR206W	YJR142W	P47173	342 aa		4.53	□□□□□ -1.68
EBS1	YDR206W	CWH41	P53008	833 aa		4.53	□□□□□ -1.68
EBS1	YDR206W	RSC4	Q02206	625 aa		4.53	□□□□□ -1.68
EBS1	YDR206W	SPT2	P06843	333 aa	Predicted RBP	4.53	□□□□□ -1.68
EBS1	YDR206W	MRPL33	P20084	86 aa		4.52	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 117 ms