RNA–Protein interactions for RNA: YDR192C

NUP42, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP42, Length 1,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP42YDR192C KAR5Q04746 504 aa6.97□□□□□ -1.29
NUP42YDR192C CYT1P07143 309 aa6.96□□□□□ -1.3
NUP42YDR192C NTH2P35172 780 aa6.96□□□□□ -1.3
NUP42YDR192C YBL086CP38177 466 aa6.96□□□□□ -1.3
NUP42YDR192C PNP1Q05788 311 aa6.96□□□□□ -1.3
NUP42YDR192C PUN1Q06991 263 aa6.96□□□□□ -1.3
NUP42YDR192C RPS6AP0CX37 236 aaKnown RBP6.95□□□□□ -1.3
NUP42YDR192C RPS6BP0CX38 236 aaPredicted RBP6.95□□□□□ -1.3
NUP42YDR192C STE6P12866 1290 aa6.95□□□□□ -1.3
NUP42YDR192C BDS1Q08347 646 aa6.95□□□□□ -1.3
NUP42YDR192C FUR4P05316 633 aaKnown RBP6.94□□□□□ -1.3
NUP42YDR192C DAT1P13483 248 aaKnown RBP6.94□□□□□ -1.3
NUP42YDR192C PEP1P32319 1579 aa6.94□□□□□ -1.3
NUP42YDR192C SWI5P08153 709 aa6.93□□□□□ -1.3
NUP42YDR192C SEC20P28791 383 aa6.93□□□□□ -1.3
NUP42YDR192C RRN6P32786 894 aa6.93□□□□□ -1.3
NUP42YDR192C DLD3P39976 496 aaKnown RBP6.93□□□□□ -1.3
NUP42YDR192C YBL113CQ7M4S9 792 aa6.93□□□□□ -1.3
NUP42YDR192C DFG5Q05031 458 aa6.92□□□□□ -1.3
NUP42YDR192C HEM3P28789 327 aa6.91□□□□□ -1.3
NUP42YDR192C NGR1P32831 672 aaKnown RBP6.91□□□□□ -1.3
NUP42YDR192C TPS3P38426 1054 aaKnown RBP6.91□□□□□ -1.3
NUP42YDR192C ALD4P46367 519 aaKnown RBP6.91□□□□□ -1.3
NUP42YDR192C ATG1P53104 897 aa6.91□□□□□ -1.3
NUP42YDR192C CDC4P07834 779 aa6.9□□□□□ -1.3
NUP42YDR192C SEN54Q02825 467 aaPredicted RBP6.9□□□□□ -1.3
NUP42YDR192C WTM2Q12206 467 aa6.9□□□□□ -1.3
NUP42YDR192C MCM1P11746 286 aa6.89□□□□□ -1.31
NUP42YDR192C ASF1P32447 279 aa6.89□□□□□ -1.31
NUP42YDR192C ERP5P38819 212 aa6.89□□□□□ -1.31
NUP42YDR192C MSB3P48566 633 aaPredicted RBP6.89□□□□□ -1.31
NUP42YDR192C UGA3P26370 528 aa6.88□□□□□ -1.31
NUP42YDR192C HST3P53687 447 aa6.88□□□□□ -1.31
NUP42YDR192C ACF4P47129 309 aa6.87□□□□□ -1.31
NUP42YDR192C AFT1P22149 690 aa6.86□□□□□ -1.31
NUP42YDR192C BOL3P39724 118 aa6.86□□□□□ -1.31
NUP42YDR192C SPR3P41901 512 aa6.86□□□□□ -1.31
NUP42YDR192C SUM1P46676 1062 aa6.86□□□□□ -1.31
NUP42YDR192C MET32Q12041 191 aa6.86□□□□□ -1.31
NUP42YDR192C ATG2P53855 1592 aa6.86□□□□□ -1.31
NUP42YDR192C ARG82P07250 355 aa6.85□□□□□ -1.31
NUP42YDR192C TRL1P09880 827 aaKnown RBP6.85□□□□□ -1.31
NUP42YDR192C SCD5P34758 872 aa6.85□□□□□ -1.31
NUP42YDR192C GRS1P38088 690 aaKnown RBP6.85□□□□□ -1.31
NUP42YDR192C MSC6Q08818 692 aaKnown RBP6.85□□□□□ -1.31
NUP42YDR192C LSO1Q3E827 93 aa6.85□□□□□ -1.31
NUP42YDR192C SUV3P32580 737 aa6.84□□□□□ -1.31
NUP42YDR192C GLO3P38682 493 aaKnown RBP6.84□□□□□ -1.31
NUP42YDR192C YPQ2Q06328 317 aa6.84□□□□□ -1.31
NUP42YDR192C XRN1P22147 1528 aaKnown RBP6.84□□□□□ -1.31
NUP42YDR192C RAS1P01119 309 aa6.83□□□□□ -1.32
NUP42YDR192C PPX1P38698 397 aa6.83□□□□□ -1.32
NUP42YDR192C QDR1P40475 563 aa6.83□□□□□ -1.32
NUP42YDR192C YCF1P39109 1515 aaKnown RBP6.82□□□□□ -1.32
NUP42YDR192C DPS1P04802 557 aaKnown RBP6.82□□□□□ -1.32
NUP42YDR192C ASH1P34233 588 aa6.82□□□□□ -1.32
NUP42YDR192C YHL050CP38721 697 aa6.82□□□□□ -1.32
NUP42YDR192C YHR219WP38900 624 aa6.82□□□□□ -1.32
NUP42YDR192C MDJ2P42834 146 aa6.82□□□□□ -1.32
NUP42YDR192C YBR197CP38306 217 aa6.81□□□□□ -1.32
NUP42YDR192C UTP7P40055 554 aaKnown RBP6.81□□□□□ -1.32
NUP42YDR192C AAD14P42884 376 aa6.81□□□□□ -1.32
NUP42YDR192C CLA4P48562 842 aa6.81□□□□□ -1.32
NUP42YDR192C SNU71P53207 620 aaKnown RBP6.81□□□□□ -1.32
NUP42YDR192C FOX2Q02207 900 aaKnown RBP6.81□□□□□ -1.32
NUP42YDR192C CAB1Q04430 367 aa6.81□□□□□ -1.32
NUP42YDR192C UTP4Q06679 776 aaKnown RBP6.81□□□□□ -1.32
NUP42YDR192C SRF1Q12516 437 aa6.81□□□□□ -1.32
NUP42YDR192C ISC10P32645 267 aa6.8□□□□□ -1.32
NUP42YDR192C ALA1P40825 983 aaKnown RBP6.8□□□□□ -1.32
NUP42YDR192C TAF2P23255 1407 aa6.79□□□□□ -1.32
NUP42YDR192C HXT5P38695 592 aa6.79□□□□□ -1.32
NUP42YDR192C IPL1P38991 367 aa6.79□□□□□ -1.32
NUP42YDR192C MSN5P52918 1224 aa6.79□□□□□ -1.32
NUP42YDR192C UFD2P54860 961 aa6.79□□□□□ -1.32
NUP42YDR192C AIR1P40507 360 aaKnown RBP6.78□□□□□ -1.32
NUP42YDR192C APC11Q12157 165 aa6.78□□□□□ -1.32
NUP42YDR192C MRPL33P20084 86 aa6.77□□□□□ -1.33
NUP42YDR192C AHP1P38013 176 aaKnown RBP6.77□□□□□ -1.33
NUP42YDR192C YTA6P40328 754 aa6.77□□□□□ -1.33
NUP42YDR192C PTK2P47116 818 aaKnown RBP6.77□□□□□ -1.33
NUP42YDR192C NOP7P53261 605 aaKnown RBP6.77□□□□□ -1.33
NUP42YDR192C VTC4P47075 721 aa6.76□□□□□ -1.33
NUP42YDR192C TRS120Q04183 1289 aa6.76□□□□□ -1.33
NUP42YDR192C NUT2Q06213 157 aa6.76□□□□□ -1.33
NUP42YDR192C THI12P42883 340 aa6.75□□□□□ -1.33
NUP42YDR192C THI5P43534 340 aa6.75□□□□□ -1.33
NUP42YDR192C THI11P47183 340 aa6.75□□□□□ -1.33
NUP42YDR192C THI13Q07748 340 aa6.75□□□□□ -1.33
NUP42YDR192C YBR287WP38355 427 aa6.74□□□□□ -1.33
NUP42YDR192C DYS1P38791 387 aa6.74□□□□□ -1.33
NUP42YDR192C SSN3P39073 555 aa6.74□□□□□ -1.33
NUP42YDR192C NUP85P46673 744 aa6.74□□□□□ -1.33
NUP42YDR192C JJJ2P46997 583 aa6.74□□□□□ -1.33
NUP42YDR192C LSC2P53312 427 aa6.74□□□□□ -1.33
NUP42YDR192C SMC1P32908 1225 aa6.73□□□□□ -1.33
NUP42YDR192C BOI1P38041 980 aaKnown RBP6.73□□□□□ -1.33
NUP42YDR192C YJR115WP47152 169 aa6.73□□□□□ -1.33
NUP42YDR192C Q0182Q9ZZW1 134 aa6.73□□□□□ -1.33
NUP42YDR192C SKI3P17883 1432 aaKnown RBP6.73□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 16.9 ms