RNA–Protein interactions for RNA: YDL020C

RPN4, Transcript of Transcription factor that stimulates expression of proteasome genes, yeastyeast

Gene RPN4, Length 1,596 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN4YDL020C BDS1Q08347 646 aa6.35□□□□□ -1.39
RPN4YDL020C MET32Q12041 191 aa6.35□□□□□ -1.39
RPN4YDL020C WTM2Q12206 467 aa6.35□□□□□ -1.39
RPN4YDL020C ERP5P38819 212 aa6.34□□□□□ -1.39
RPN4YDL020C ALD4P46367 519 aaKnown RBP6.34□□□□□ -1.39
RPN4YDL020C SUV3P32580 737 aa6.33□□□□□ -1.4
RPN4YDL020C BOL3P39724 118 aa6.33□□□□□ -1.4
RPN4YDL020C CWH41P53008 833 aa6.33□□□□□ -1.4
RPN4YDL020C SEN54Q02825 467 aaPredicted RBP6.33□□□□□ -1.4
RPN4YDL020C FUR4P05316 633 aaKnown RBP6.32□□□□□ -1.4
RPN4YDL020C NGR1P32831 672 aaKnown RBP6.32□□□□□ -1.4
RPN4YDL020C STM1P39015 273 aaKnown RBP6.31□□□□□ -1.4
RPN4YDL020C RTT106P40161 455 aa6.31□□□□□ -1.4
RPN4YDL020C CDC4P07834 779 aa6.31□□□□□ -1.4
RPN4YDL020C TRL1P09880 827 aaKnown RBP6.31□□□□□ -1.4
RPN4YDL020C AIR1P40507 360 aaKnown RBP6.31□□□□□ -1.4
RPN4YDL020C BRE2P43132 505 aa6.31□□□□□ -1.4
RPN4YDL020C GAR1P28007 205 aaKnown RBP6.3□□□□□ -1.4
RPN4YDL020C GRS1P38088 690 aaKnown RBP6.3□□□□□ -1.4
RPN4YDL020C DLD3P39976 496 aaKnown RBP6.3□□□□□ -1.4
RPN4YDL020C UGA3P26370 528 aa6.29□□□□□ -1.4
RPN4YDL020C RRN6P32786 894 aa6.29□□□□□ -1.4
RPN4YDL020C UTP7P40055 554 aaKnown RBP6.29□□□□□ -1.4
RPN4YDL020C ATG1P53104 897 aa6.29□□□□□ -1.4
RPN4YDL020C MDJ2P42834 146 aa6.28□□□□□ -1.4
RPN4YDL020C HST3P53687 447 aa6.28□□□□□ -1.4
RPN4YDL020C AFT1P22149 690 aa6.27□□□□□ -1.41
RPN4YDL020C HEM3P28789 327 aa6.27□□□□□ -1.41
RPN4YDL020C ASH1P34233 588 aa6.27□□□□□ -1.41
RPN4YDL020C GLO3P38682 493 aaKnown RBP6.27□□□□□ -1.41
RPN4YDL020C MSB3P48566 633 aaPredicted RBP6.27□□□□□ -1.41
RPN4YDL020C YPQ2Q06328 317 aa6.27□□□□□ -1.41
RPN4YDL020C YBR197CP38306 217 aa6.27□□□□□ -1.41
RPN4YDL020C IPL1P38991 367 aa6.27□□□□□ -1.41
RPN4YDL020C SUM1P46676 1062 aa6.27□□□□□ -1.41
RPN4YDL020C SEC20P28791 383 aa6.26□□□□□ -1.41
RPN4YDL020C YHL050CP38721 697 aa6.26□□□□□ -1.41
RPN4YDL020C YHR219WP38900 624 aa6.26□□□□□ -1.41
RPN4YDL020C QDR1P40475 563 aa6.26□□□□□ -1.41
RPN4YDL020C FOX2Q02207 900 aaKnown RBP6.26□□□□□ -1.41
RPN4YDL020C CAB1Q04430 367 aa6.26□□□□□ -1.41
RPN4YDL020C MSC6Q08818 692 aaKnown RBP6.26□□□□□ -1.41
RPN4YDL020C LSO1Q3E827 93 aa6.26□□□□□ -1.41
RPN4YDL020C MCM1P11746 286 aa6.25□□□□□ -1.41
RPN4YDL020C GBP2P25555 427 aaKnown RBP RIP-Chip data6.25□□□□□ -1.41not detected
RPN4YDL020C ISC10P32645 267 aa6.25□□□□□ -1.41
RPN4YDL020C ARG82P07250 355 aa6.24□□□□□ -1.41
RPN4YDL020C BOI1P38041 980 aaKnown RBP6.24□□□□□ -1.41
RPN4YDL020C AAD14P42884 376 aa6.24□□□□□ -1.41
RPN4YDL020C ACF4P47129 309 aa6.24□□□□□ -1.41
RPN4YDL020C HXT5P38695 592 aa6.23□□□□□ -1.41
RPN4YDL020C GCR2Q01722 534 aa6.23□□□□□ -1.41
RPN4YDL020C ALA1P40825 983 aaKnown RBP6.22□□□□□ -1.41
RPN4YDL020C SCD5P34758 872 aa6.21□□□□□ -1.42
RPN4YDL020C PPX1P38698 397 aa6.21□□□□□ -1.42
RPN4YDL020C PTK2P47116 818 aaKnown RBP6.21□□□□□ -1.42
RPN4YDL020C NUT2Q06213 157 aa6.21□□□□□ -1.42
RPN4YDL020C SRF1Q12516 437 aa6.21□□□□□ -1.42
RPN4YDL020C SSN3P39073 555 aa6.2□□□□□ -1.42
RPN4YDL020C YJR115WP47152 169 aa6.2□□□□□ -1.42
RPN4YDL020C MRPL33P20084 86 aa6.19□□□□□ -1.42
RPN4YDL020C SPR3P41901 512 aa6.19□□□□□ -1.42
RPN4YDL020C APC11Q12157 165 aa6.19□□□□□ -1.42
RPN4YDL020C FRT1Q99332 602 aa6.19□□□□□ -1.42
RPN4YDL020C THI12P42883 340 aa6.18□□□□□ -1.42
RPN4YDL020C THI5P43534 340 aa6.18□□□□□ -1.42
RPN4YDL020C THI11P47183 340 aa6.18□□□□□ -1.42
RPN4YDL020C MSN5P52918 1224 aa6.18□□□□□ -1.42
RPN4YDL020C THI13Q07748 340 aa6.18□□□□□ -1.42
RPN4YDL020C WHI5Q12416 295 aa6.18□□□□□ -1.42
RPN4YDL020C Q0182Q9ZZW1 134 aa6.18□□□□□ -1.42
RPN4YDL020C RPB10P22139 70 aa6.18□□□□□ -1.42
RPN4YDL020C DLD1P32891 587 aa6.18□□□□□ -1.42
RPN4YDL020C YNL165WP53891 406 aa6.18□□□□□ -1.42
RPN4YDL020C ASF1P32447 279 aa6.17□□□□□ -1.42
RPN4YDL020C JJJ2P46997 583 aa6.17□□□□□ -1.42
RPN4YDL020C TRS120Q04183 1289 aa6.17□□□□□ -1.42
RPN4YDL020C UTP4Q06679 776 aaKnown RBP6.17□□□□□ -1.42
RPN4YDL020C MLF3P32047 452 aa6.16□□□□□ -1.42
RPN4YDL020C SUT1P53032 299 aaKnown RBP6.16□□□□□ -1.42
RPN4YDL020C VMA3P25515 160 aa6.15□□□□□ -1.42
RPN4YDL020C AHP1P38013 176 aaKnown RBP6.15□□□□□ -1.42
RPN4YDL020C NUP85P46673 744 aa6.15□□□□□ -1.42
RPN4YDL020C SNU71P53207 620 aaKnown RBP6.15□□□□□ -1.42
RPN4YDL020C KTR2P33550 425 aa6.14□□□□□ -1.43
RPN4YDL020C SHM1P37292 490 aaPredicted RBP6.14□□□□□ -1.43
RPN4YDL020C POL32P47110 350 aa6.14□□□□□ -1.43
RPN4YDL020C YJR098CP47139 656 aa6.14□□□□□ -1.43
RPN4YDL020C UFD2P54860 961 aa6.14□□□□□ -1.43
RPN4YDL020C RPS31P05759 152 aaKnown RBP6.14□□□□□ -1.43
RPN4YDL020C MET22P32179 357 aa6.14□□□□□ -1.43
RPN4YDL020C IRE1P32361 1115 aa6.14□□□□□ -1.43
RPN4YDL020C DAL1P32375 460 aa6.14□□□□□ -1.43
RPN4YDL020C LSC2P53312 427 aa6.14□□□□□ -1.43
RPN4YDL020C SLA1P32790 1244 aa6.13□□□□□ -1.43
RPN4YDL020C LDH1P38139 375 aa6.13□□□□□ -1.43
RPN4YDL020C YTA6P40328 754 aa6.13□□□□□ -1.43
RPN4YDL020C VTC4P47075 721 aa6.13□□□□□ -1.43
RPN4YDL020C RRP15Q06511 250 aaPredicted RBP6.13□□□□□ -1.43
RPN4YDL020C TY1A-DR3Q12441 440 aa6.13□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 82.6 ms