RNA–Protein interactions for RNA: YCR092C

MSH3, Transcript of Mismatch repair protein, yeastyeast

Gene MSH3, Length 3,057 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH3YCR092C YLL067CQ07888 1374 aa2.11□□□□□ -2.07
MSH3YCR092C NAB2P32505 525 aaKnown RBP RIP-Chip data2.11□□□□□ -2.07not detected
MSH3YCR092C YLR346CQ06139 101 aa2.11□□□□□ -2.07
MSH3YCR092C ENT1Q12518 454 aa2.11□□□□□ -2.07
MSH3YCR092C SRC1Q03707 834 aa2.1□□□□□ -2.07
MSH3YCR092C TAP42Q04372 366 aa2.1□□□□□ -2.07
MSH3YCR092C SSA2P10592 639 aaKnown RBP2.1□□□□□ -2.07
MSH3YCR092C RAM1P22007 431 aa2.1□□□□□ -2.07
MSH3YCR092C GLC3P32775 704 aa2.1□□□□□ -2.07
MSH3YCR092C PRP40P33203 583 aaKnown RBP2.1□□□□□ -2.07
MSH3YCR092C REF2P42073 533 aaPredicted RBP2.1□□□□□ -2.07
MSH3YCR092C SAS4Q04003 481 aa2.1□□□□□ -2.07
MSH3YCR092C YPR015CQ12531 247 aa2.1□□□□□ -2.07
MSH3YCR092C KXD1P53158 218 aa2.09□□□□□ -2.07
MSH3YCR092C YLR326WQ06170 240 aaKnown RBP2.09□□□□□ -2.07
MSH3YCR092C PUS5Q06244 254 aa2.09□□□□□ -2.07
MSH3YCR092C SLM3Q12093 417 aa2.09□□□□□ -2.07
MSH3YCR092C KRE5P22023 1365 aa2.09□□□□□ -2.07
MSH3YCR092C GRX1P25373 110 aaKnown RBP2.09□□□□□ -2.07
MSH3YCR092C GRX4P32642 244 aa2.09□□□□□ -2.07
MSH3YCR092C UBP14P38237 781 aaKnown RBP2.09□□□□□ -2.07
MSH3YCR092C SEC3P33332 1336 aaKnown RBP2.09□□□□□ -2.08
MSH3YCR092C ERT1P38140 529 aa2.09□□□□□ -2.08
MSH3YCR092C IES2P40154 320 aa2.09□□□□□ -2.08
MSH3YCR092C HGH1P48362 394 aaKnown RBP2.09□□□□□ -2.08
MSH3YCR092C CDC73Q06697 393 aa2.09□□□□□ -2.08
MSH3YCR092C CTT1P06115 562 aa2.08□□□□□ -2.08
MSH3YCR092C YKL222CP35995 705 aa2.08□□□□□ -2.08
MSH3YCR092C TOS1P38288 455 aa2.08□□□□□ -2.08
MSH3YCR092C FPK1P53739 893 aa2.08□□□□□ -2.08
MSH3YCR092C TUM1Q08686 304 aaKnown RBP2.08□□□□□ -2.08
MSH3YCR092C TCB1Q12466 1186 aa2.08□□□□□ -2.08
MSH3YCR092C SSM4P40318 1319 aa2.08□□□□□ -2.08
MSH3YCR092C PRP5P21372 849 aaPredicted RBP2.08□□□□□ -2.08
MSH3YCR092C PCS60P38137 543 aaKnown RBP RIP-Chip data2.08□□□□□ -2.08not detected
MSH3YCR092C YBL086CP38177 466 aa2.08□□□□□ -2.08
MSH3YCR092C RIA1P53893 1110 aa2.08□□□□□ -2.08
MSH3YCR092C LAM6Q08001 693 aa2.08□□□□□ -2.08
MSH3YCR092C RAS1P01119 309 aa2.07□□□□□ -2.08
MSH3YCR092C RPP2BP02400 110 aaKnown RBP2.07□□□□□ -2.08
MSH3YCR092C PRT1P06103 763 aaKnown RBP2.07□□□□□ -2.08
MSH3YCR092C UBX2Q04228 584 aa2.07□□□□□ -2.08
MSH3YCR092C CSC1Q06538 782 aa2.07□□□□□ -2.08
MSH3YCR092C RPO41P13433 1351 aaKnown RBP2.07□□□□□ -2.08
MSH3YCR092C PDR1P12383 1068 aa2.06□□□□□ -2.08
MSH3YCR092C YKR075CP36155 307 aa2.06□□□□□ -2.08
MSH3YCR092C NPR2P39923 615 aa2.06□□□□□ -2.08
MSH3YCR092C BRE2P43132 505 aa2.06□□□□□ -2.08
MSH3YCR092C CTH1P47976 325 aa2.06□□□□□ -2.08
MSH3YCR092C TFB4Q12004 338 aa2.06□□□□□ -2.08
MSH3YCR092C AMS1P22855 1083 aa2.06□□□□□ -2.08
MSH3YCR092C UGA3P26370 528 aa2.06□□□□□ -2.08
MSH3YCR092C PFF1P38244 976 aa2.06□□□□□ -2.08
MSH3YCR092C FOX2Q02207 900 aaKnown RBP2.06□□□□□ -2.08
MSH3YCR092C YDR090CQ03193 310 aa2.06□□□□□ -2.08
MSH3YCR092C GSC2P40989 1895 aa2.06□□□□□ -2.08
MSH3YCR092C ADR1P07248 1323 aa2.05□□□□□ -2.08
MSH3YCR092C CLB5P30283 435 aa2.05□□□□□ -2.08
MSH3YCR092C SAP155P43612 1002 aa2.05□□□□□ -2.08
MSH3YCR092C MAK21Q12176 1025 aaKnown RBP2.05□□□□□ -2.08
MSH3YCR092C BUG1Q12191 341 aa2.05□□□□□ -2.08
MSH3YCR092C FAS2P19097 1887 aaKnown RBP2.05□□□□□ -2.08
MSH3YCR092C LEU2P04173 364 aaPredicted RBP2.05□□□□□ -2.08
MSH3YCR092C SDH2P21801 266 aa2.05□□□□□ -2.08
MSH3YCR092C RRN7P40992 514 aa2.05□□□□□ -2.08
MSH3YCR092C EAR1Q03212 550 aa2.05□□□□□ -2.08
MSH3YCR092C YPR109WQ06104 294 aa2.05□□□□□ -2.08
MSH3YCR092C MAM3Q12296 706 aa2.05□□□□□ -2.08
MSH3YCR092C NUD1P32336 851 aa2.04□□□□□ -2.08
MSH3YCR092C DOT5P40553 215 aa2.04□□□□□ -2.08
MSH3YCR092C GAP1P19145 602 aaPredicted RBP2.04□□□□□ -2.08
MSH3YCR092C YPR148CQ06523 435 aa2.04□□□□□ -2.08
MSH3YCR092C PES4P39684 611 aa2.04□□□□□ -2.08
MSH3YCR092C AIM21P40563 679 aa2.04□□□□□ -2.08
MSH3YCR092C YJR008WP47085 338 aa2.04□□□□□ -2.08
MSH3YCR092C ERO1Q03103 563 aa2.04□□□□□ -2.08
MSH3YCR092C NYV1Q12255 253 aa2.04□□□□□ -2.08
MSH3YCR092C AUS1Q08409 1394 aa2.03□□□□□ -2.08
MSH3YCR092C SIT4P20604 311 aa2.03□□□□□ -2.08
MSH3YCR092C SHC1P39000 512 aa2.03□□□□□ -2.08
MSH3YCR092C BUD20Q08004 166 aaPredicted RBP2.03□□□□□ -2.08
MSH3YCR092C PHM7Q12252 991 aa2.03□□□□□ -2.08
MSH3YCR092C GRX6Q12438 231 aa2.03□□□□□ -2.08
MSH3YCR092C RPS9AO13516 197 aaKnown RBP2.03□□□□□ -2.08
MSH3YCR092C RGA1P39083 1007 aa2.03□□□□□ -2.08
MSH3YCR092C RRT14P40470 206 aa2.03□□□□□ -2.08
MSH3YCR092C RPL34BP40525 121 aaKnown RBP2.03□□□□□ -2.08
MSH3YCR092C RGA2Q06407 1009 aa2.03□□□□□ -2.08
MSH3YCR092C PSF3Q12146 194 aa2.03□□□□□ -2.08
MSH3YCR092C RTF1P53064 558 aa2.02□□□□□ -2.09
MSH3YCR092C NOP7P53261 605 aaKnown RBP2.02□□□□□ -2.09
MSH3YCR092C IXR1P33417 597 aa2.02□□□□□ -2.09
MSH3YCR092C YJL181WP46987 611 aa2.02□□□□□ -2.09
MSH3YCR092C SAC3P46674 1301 aa2.02□□□□□ -2.09
MSH3YCR092C WHI3P34761 661 aaKnown RBP2.02□□□□□ -2.09
MSH3YCR092C STR2P47164 639 aa2.02□□□□□ -2.09
MSH3YCR092C SAS10Q12136 610 aaPredicted RBP2.02□□□□□ -2.09
MSH3YCR092C ORC6P38826 435 aa2.01□□□□□ -2.09
MSH3YCR092C ISM1P48526 1002 aa2.01□□□□□ -2.09
MSH3YCR092C APP1P53933 587 aa2.01□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms