RNA–Protein interactions for RNA: YBL079W

NUP170, Transcript of Subunit of the inner ring of the nuclear pore complex (NPC), yeastyeast

Gene NUP170, Length 4,509 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP170YBL079W DUS1P53759 423 aaKnown RBP2.9□□□□□ -1.95
NUP170YBL079W NUP145P49687 1317 aa2.9□□□□□ -1.95
NUP170YBL079W TY4B-HP0C2J7 1802 aa2.9□□□□□ -1.95
NUP170YBL079W TY4B-JP47024 1803 aa2.9□□□□□ -1.95
NUP170YBL079W TEA1P47988 759 aa2.9□□□□□ -1.95
NUP170YBL079W INP54Q08227 384 aaKnown RBP2.9□□□□□ -1.95
NUP170YBL079W TIM23P32897 222 aa2.89□□□□□ -1.95
NUP170YBL079W MAC1P35192 417 aa2.89□□□□□ -1.95
NUP170YBL079W PAP2P53632 584 aaKnown RBP2.89□□□□□ -1.95
NUP170YBL079W SDH2P21801 266 aa2.89□□□□□ -1.95
NUP170YBL079W BUD2P33314 1104 aa2.89□□□□□ -1.95
NUP170YBL079W SNU71P53207 620 aaKnown RBP2.89□□□□□ -1.95
NUP170YBL079W ADE16P54113 591 aaKnown RBP2.89□□□□□ -1.95
NUP170YBL079W NOP8Q08287 484 aaPredicted RBP2.89□□□□□ -1.95
NUP170YBL079W VAB2P40003 282 aa2.89□□□□□ -1.95
NUP170YBL079W CWH41P53008 833 aa2.89□□□□□ -1.95
NUP170YBL079W YLL067CQ07888 1374 aa2.89□□□□□ -1.95
NUP170YBL079W PIF1P07271 859 aa2.89□□□□□ -1.95
NUP170YBL079W EMP47P43555 445 aa2.89□□□□□ -1.95
NUP170YBL079W YNL050CP53952 270 aa2.89□□□□□ -1.95
NUP170YBL079W RPP0P05317 312 aaKnown RBP2.88□□□□□ -1.95
NUP170YBL079W SER1P33330 395 aaKnown RBP2.88□□□□□ -1.95
NUP170YBL079W LYS14P40971 790 aa2.88□□□□□ -1.95
NUP170YBL079W MSH4P40965 878 aaPredicted RBP2.88□□□□□ -1.95
NUP170YBL079W DNM1P54861 757 aa2.88□□□□□ -1.95
NUP170YBL079W PER1P25625 357 aa2.88□□□□□ -1.95
NUP170YBL079W SPR3P41901 512 aa2.88□□□□□ -1.95
NUP170YBL079W YRB30P53107 440 aaPredicted RBP2.88□□□□□ -1.95
NUP170YBL079W RBA50Q04418 439 aa2.88□□□□□ -1.95
NUP170YBL079W DPH6Q12429 685 aa2.88□□□□□ -1.95
NUP170YBL079W AKL1P38080 1108 aaKnown RBP2.87□□□□□ -1.95
NUP170YBL079W RPN1P38764 993 aaKnown RBP2.87□□□□□ -1.95
NUP170YBL079W YLR271WQ06152 274 aa2.87□□□□□ -1.95
NUP170YBL079W SAC3P46674 1301 aa2.87□□□□□ -1.95
NUP170YBL079W YKR023WP36119 530 aaKnown RBP2.87□□□□□ -1.95
NUP170YBL079W EAF6P47128 113 aa2.87□□□□□ -1.95
NUP170YBL079W MAK21Q12176 1025 aaKnown RBP2.87□□□□□ -1.95
NUP170YBL079W PSD2P53037 1138 aaKnown RBP2.87□□□□□ -1.95
NUP170YBL079W RIM15P43565 1770 aa2.87□□□□□ -1.95
NUP170YBL079W YLR278CQ05854 1341 aa2.87□□□□□ -1.95
NUP170YBL079W TPS3P38426 1054 aaKnown RBP2.87□□□□□ -1.95
NUP170YBL079W YIL089WP40500 205 aa2.87□□□□□ -1.95
NUP170YBL079W MTC5Q03897 1148 aa2.87□□□□□ -1.95
NUP170YBL079W GAS4Q08271 471 aa2.87□□□□□ -1.95
NUP170YBL079W CLF1Q12309 687 aaPredicted RBP2.87□□□□□ -1.95
NUP170YBL079W HEM1P09950 548 aaPredicted RBP2.86□□□□□ -1.95
NUP170YBL079W BUD27P43573 796 aaKnown RBP RIP-Chip data2.86□□□□□ -1.95not detected
NUP170YBL079W FAP1P53971 965 aa2.86□□□□□ -1.95
NUP170YBL079W PKH1Q03407 766 aa2.86□□□□□ -1.95
NUP170YBL079W PDS5Q04264 1277 aa2.86□□□□□ -1.95
NUP170YBL079W ICL2Q12031 575 aa2.86□□□□□ -1.95
NUP170YBL079W THS1P04801 734 aaKnown RBP2.86□□□□□ -1.95
NUP170YBL079W TPM1P17536 199 aaKnown RBP2.86□□□□□ -1.95
NUP170YBL079W HSP104P31539 908 aaKnown RBP2.86□□□□□ -1.95
NUP170YBL079W APE3P37302 537 aaKnown RBP2.86□□□□□ -1.95
NUP170YBL079W ETP1P38748 585 aaKnown RBP2.86□□□□□ -1.95
NUP170YBL079W SSF1P38789 453 aaPredicted RBP2.86□□□□□ -1.95
NUP170YBL079W ZDS1P50111 915 aaKnown RBP2.86□□□□□ -1.95
NUP170YBL079W TOP1P04786 769 aa2.86□□□□□ -1.95
NUP170YBL079W HVG1P0CE11 249 aa2.86□□□□□ -1.95
NUP170YBL079W MCM6P53091 1017 aaKnown RBP2.86□□□□□ -1.95
NUP170YBL079W DIT2P21595 489 aa2.85□□□□□ -1.95
NUP170YBL079W AFG2P32794 780 aa2.85□□□□□ -1.95
NUP170YBL079W CST6P40535 587 aa2.85□□□□□ -1.95
NUP170YBL079W TUM1Q08686 304 aaKnown RBP2.85□□□□□ -1.95
NUP170YBL079W DPL1Q05567 589 aa2.85□□□□□ -1.95
NUP170YBL079W SIS2P36024 562 aa2.85□□□□□ -1.95
NUP170YBL079W NET1P47035 1189 aa2.85□□□□□ -1.95
NUP170YBL079W PDR18P53756 1333 aa2.85□□□□□ -1.95
NUP170YBL079W BFA1P47113 574 aa2.85□□□□□ -1.95
NUP170YBL079W MET7Q08645 548 aa2.85□□□□□ -1.95
NUP170YBL079W SNU66Q12420 587 aaPredicted RBP2.85□□□□□ -1.95
NUP170YBL079W MPH3P0CE00 602 aa2.84□□□□□ -1.95
NUP170YBL079W MXR1P40029 184 aa2.84□□□□□ -1.95
NUP170YBL079W NOP2P40991 618 aaKnown RBP2.84□□□□□ -1.95
NUP170YBL079W MPP10P47083 593 aaKnown RBP2.84□□□□□ -1.95
NUP170YBL079W SRC1Q03707 834 aa2.84□□□□□ -1.95
NUP170YBL079W YLR225CQ05948 407 aaKnown RBP2.84□□□□□ -1.95
NUP170YBL079W GPT2P36148 743 aa2.84□□□□□ -1.95
NUP170YBL079W VPS53P47061 822 aa2.84□□□□□ -1.95
NUP170YBL079W GYP7P48365 746 aa2.84□□□□□ -1.95
NUP170YBL079W ECM16Q04217 1267 aaKnown RBP2.84□□□□□ -1.96
NUP170YBL079W DIP2Q12220 943 aaPredicted RBP2.84□□□□□ -1.96
NUP170YBL079W GIN4Q12263 1142 aa2.84□□□□□ -1.96
NUP170YBL079W CSR2Q12734 1121 aa2.84□□□□□ -1.96
NUP170YBL079W MLP1Q02455 1875 aaKnown RBP2.84□□□□□ -1.96
NUP170YBL079W AFT1P22149 690 aa2.83□□□□□ -1.96
NUP170YBL079W APL2P36000 726 aaPredicted RBP2.83□□□□□ -1.96
NUP170YBL079W LDH1P38139 375 aa2.83□□□□□ -1.96
NUP170YBL079W JJJ2P46997 583 aa2.83□□□□□ -1.96
NUP170YBL079W JIP4Q03361 876 aa2.83□□□□□ -1.96
NUP170YBL079W YRF1-3P0CX14 1859 aa2.83□□□□□ -1.96
NUP170YBL079W YRF1-7P0CX15 1859 aa2.83□□□□□ -1.96
NUP170YBL079W YRF1-6P53819 1859 aa2.83□□□□□ -1.96
NUP170YBL079W ERG12P07277 443 aa2.83□□□□□ -1.96
NUP170YBL079W PAH1P32567 862 aa2.83□□□□□ -1.96
NUP170YBL079W SEC8P32855 1065 aa2.83□□□□□ -1.96
NUP170YBL079W NTH2P35172 780 aa2.83□□□□□ -1.96
NUP170YBL079W MCD4P36051 919 aa2.83□□□□□ -1.96
NUP170YBL079W AVT3P36062 692 aa2.83□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 109.1 ms