RNA–Protein interactions for RNA: ENST00000628118.1

CHD2-213, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best)

Gene CHD2, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-213ENST00000628118 TMEM2Q9UHN6 1383 aa11.84□□□□□ -0.51
CHD2-213ENST00000628118 RNF39Q9H2S5 420 aa11.84□□□□□ -0.51
CHD2-213ENST00000628118 EID1Q9Y6B2 187 aa11.84□□□□□ -0.51
CHD2-213ENST00000628118 STRCQ7RTU9 1775 aa11.84□□□□□ -0.51
CHD2-213ENST00000628118 MED14O60244 1454 aa11.83□□□□□ -0.52
CHD2-213ENST00000628118 TMEM131LA2VDJ0 1609 aa11.82□□□□□ -0.52
CHD2-213ENST00000628118 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.82□□□□□ -0.52
CHD2-213ENST00000628118 CCDC144AA2RUR9 1427 aa11.82□□□□□ -0.52
CHD2-213ENST00000628118 POLR1AO95602 1720 aaPredicted RBP11.82□□□□□ -0.52
CHD2-213ENST00000628118 SCAF11Q99590 1463 aaKnown RBP11.82□□□□□ -0.52
CHD2-213ENST00000628118 TXNDC2Q86VQ3 553 aa11.81□□□□□ -0.52
CHD2-213ENST00000628118 KIF1BO60333 1816 aa11.81□□□□□ -0.52
CHD2-213ENST00000628118 NEURL4Q96JN8 1562 aa11.8□□□□□ -0.52
CHD2-213ENST00000628118 CLTCL1P53675 1640 aa11.8□□□□□ -0.52
CHD2-213ENST00000628118 CHGAP10645 457 aaKnown RBP11.8□□□□□ -0.52
CHD2-213ENST00000628118 NCKAP5LQ9HCH0 1330 aa11.8□□□□□ -0.52
CHD2-213ENST00000628118 NPHP4O75161 1426 aaPredicted RBP11.79□□□□□ -0.52
CHD2-213ENST00000628118 FOXD4L1Q9NU39 408 aa11.79□□□□□ -0.52
CHD2-213ENST00000628118 RPGRIP1LQ68CZ1 1315 aa11.79□□□□□ -0.52
CHD2-213ENST00000628118 ZFYVE9O95405 1425 aa11.78□□□□□ -0.52
CHD2-213ENST00000628118 RIMS2Q9UQ26 1411 aa11.78□□□□□ -0.52
CHD2-213ENST00000628118 ZBTB22O15209 634 aa11.78□□□□□ -0.52
CHD2-213ENST00000628118 MYO5BQ9ULV0 1848 aa11.78□□□□□ -0.52
CHD2-213ENST00000628118 ANKRD30BQ9BXX2 1392 aa11.78□□□□□ -0.52
CHD2-213ENST00000628118 LTKP29376 864 aa11.77□□□□□ -0.53
CHD2-213ENST00000628118 IQGAP1P46940 1657 aa11.76□□□□□ -0.53
CHD2-213ENST00000628118 PPP1R15AO75807 674 aaPredicted RBP11.76□□□□□ -0.53
CHD2-213ENST00000628118 ZNF326Q5BKZ1 582 aaKnown RBP11.76□□□□□ -0.53
CHD2-213ENST00000628118 U3KPZ7 1027 aaPredicted RBP11.76□□□□□ -0.53
CHD2-213ENST00000628118 PLEKHG1Q9ULL1 1385 aa11.76□□□□□ -0.53
CHD2-213ENST00000628118 VGFO15240 615 aaPredicted RBP11.74□□□□□ -0.53
CHD2-213ENST00000628118 STAC3Q96MF2 364 aa11.74□□□□□ -0.53
CHD2-213ENST00000628118 SPATA31E1Q6ZUB1 1445 aa11.74□□□□□ -0.53
CHD2-213ENST00000628118 NEXMIFQ5QGS0 1516 aa11.72□□□□□ -0.53
CHD2-213ENST00000628118 PCGF6Q9BYE7 350 aa11.72□□□□□ -0.53
CHD2-213ENST00000628118 DIP2AQ14689 1571 aa11.71□□□□□ -0.53
CHD2-213ENST00000628118 DHX57Q6P158 1386 aaKnown RBP11.71□□□□□ -0.53
CHD2-213ENST00000628118 C1QBPQ07021 282 aaKnown RBP11.71□□□□□ -0.53
CHD2-213ENST00000628118 TBX22Q9Y458 520 aa11.71□□□□□ -0.53
CHD2-213ENST00000628118 PIK3R4Q99570 1358 aa11.7□□□□□ -0.54
CHD2-213ENST00000628118 BCANQ96GW7 911 aa11.7□□□□□ -0.54
CHD2-213ENST00000628118 SETBP1Q9Y6X0 1596 aa11.7□□□□□ -0.54
CHD2-213ENST00000628118 PPLO60437 1756 aa11.69□□□□□ -0.54
CHD2-213ENST00000628118 CPS1P31327 1500 aa11.69□□□□□ -0.54
CHD2-213ENST00000628118 RGL3Q3MIN7 710 aa11.68□□□□□ -0.54
CHD2-213ENST00000628118 IQSEC2Q5JU85 1478 aa11.68□□□□□ -0.54
CHD2-213ENST00000628118 ADAMTS13Q76LX8 1427 aa11.68□□□□□ -0.54
CHD2-213ENST00000628118 LTBP4Q8N2S1 1624 aa11.68□□□□□ -0.54
CHD2-213ENST00000628118 IFT172Q9UG01 1749 aa11.67□□□□□ -0.54
CHD2-213ENST00000628118 KCNA6P17658 529 aa11.67□□□□□ -0.54
CHD2-213ENST00000628118 MYOM2P54296 1465 aa11.67□□□□□ -0.54
CHD2-213ENST00000628118 ZNF335Q9H4Z2 1342 aaPredicted RBP11.66□□□□□ -0.54
CHD2-213ENST00000628118 CLSPNQ9HAW4 1339 aa11.66□□□□□ -0.54
CHD2-213ENST00000628118 MYCNP04198 464 aaPredicted RBP11.66□□□□□ -0.54
CHD2-213ENST00000628118 NUTM2DQ5VT03 806 aaPredicted RBP11.66□□□□□ -0.54
CHD2-213ENST00000628118 CERKQ8TCT0 537 aa11.65□□□□□ -0.54
CHD2-213ENST00000628118 SLC26A8Q96RN1 970 aa11.65□□□□□ -0.54
CHD2-213ENST00000628118 NWD1Q149M9 1564 aa11.64□□□□□ -0.55
CHD2-213ENST00000628118 NRXN3Q9Y4C0 1643 aa11.64□□□□□ -0.55
CHD2-213ENST00000628118 NKTRP30414 1462 aaKnown RBP11.63□□□□□ -0.55
CHD2-213ENST00000628118 NRXN1Q9ULB1 1477 aa11.63□□□□□ -0.55
CHD2-213ENST00000628118 CHD2O14647 1828 aaKnown RBP11.63□□□□□ -0.55
CHD2-213ENST00000628118 PIK3C2GO75747 1445 aa11.63□□□□□ -0.55
CHD2-213ENST00000628118 ADGRF5Q8IZF2 1346 aa11.62□□□□□ -0.55
CHD2-213ENST00000628118 ALKQ9UM73 1620 aa11.62□□□□□ -0.55
CHD2-213ENST00000628118 NCOA3Q9Y6Q9 1424 aa11.61□□□□□ -0.55
CHD2-213ENST00000628118 LAMC1P11047 1609 aa11.61□□□□□ -0.55
CHD2-213ENST00000628118 DCAF11Q8TEB1 546 aa11.61□□□□□ -0.55
CHD2-213ENST00000628118 C14orf93Q9H972 538 aaKnown RBP11.61□□□□□ -0.55
CHD2-213ENST00000628118 PRAG1Q86YV5 1406 aa11.6□□□□□ -0.55
CHD2-213ENST00000628118 LRRC7Q96NW7 1537 aa11.6□□□□□ -0.55
CHD2-213ENST00000628118 STRCP1A6NGW2 1772 aa11.59□□□□□ -0.55
CHD2-213ENST00000628118 SIN3AQ96ST3 1273 aa11.59□□□□□ -0.55
CHD2-213ENST00000628118 AMOTL2Q9Y2J4 779 aa11.59□□□□□ -0.55
CHD2-213ENST00000628118 SETD1AO15047 1707 aaKnown RBP11.59□□□□□ -0.55
CHD2-213ENST00000628118 METP08581 1390 aa11.58□□□□□ -0.56
CHD2-213ENST00000628118 NEUROD1Q13562 356 aa11.58□□□□□ -0.56
CHD2-213ENST00000628118 TIMELESSQ9UNS1 1208 aa11.58□□□□□ -0.56
CHD2-213ENST00000628118 XRN1Q8IZH2 1706 aaKnown RBP11.57□□□□□ -0.56
CHD2-213ENST00000628118 PROSER2Q86WR7 435 aaPredicted RBP11.57□□□□□ -0.56
CHD2-213ENST00000628118 KDM2AQ9Y2K7 1162 aa11.57□□□□□ -0.56
CHD2-213ENST00000628118 PTCH1Q13635 1447 aa11.57□□□□□ -0.56
CHD2-213ENST00000628118 PTPRUQ92729 1446 aa11.57□□□□□ -0.56
CHD2-213ENST00000628118 LRPPRCP42704 1394 aaKnown RBP11.56□□□□□ -0.56
CHD2-213ENST00000628118 TONSLQ96HA7 1378 aa11.56□□□□□ -0.56
CHD2-213ENST00000628118 L3MBTL2Q969R5 705 aa11.56□□□□□ -0.56
CHD2-213ENST00000628118 SIRT1Q96EB6 747 aa11.56□□□□□ -0.56
CHD2-213ENST00000628118 KIAA1210Q9ULL0 1709 aa11.56□□□□□ -0.56
CHD2-213ENST00000628118 TMEM94Q12767 1356 aa11.55□□□□□ -0.56
CHD2-213ENST00000628118 ABCC11Q96J66 1382 aa11.55□□□□□ -0.56
CHD2-213ENST00000628118 TECPR2O15040 1411 aa11.55□□□□□ -0.56
CHD2-213ENST00000628118 TOM1O60784 492 aa11.55□□□□□ -0.56
CHD2-213ENST00000628118 SAMD1Q6SPF0 538 aaPredicted RBP11.55□□□□□ -0.56
CHD2-213ENST00000628118 FBXO41Q8TF61 875 aa11.55□□□□□ -0.56
CHD2-213ENST00000628118 CFAP70Q5T0N1 1121 aa11.54□□□□□ -0.56
CHD2-213ENST00000628118 CCER1Q8TC90 406 aaPredicted RBP11.54□□□□□ -0.56
CHD2-213ENST00000628118 KNDC1Q76NI1 1749 aa11.54□□□□□ -0.56
CHD2-213ENST00000628118 MSH6P52701 1360 aa11.54□□□□□ -0.56
CHD2-213ENST00000628118 YTHDC2Q9H6S0 1430 aaKnown RBP11.53□□□□□ -0.56
CHD2-213ENST00000628118 DCCP43146 1447 aa11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms