RNA–Protein interactions for RNA: ENST00000614941.4

SYNRG-222, Transcript of synergin gamma, humanhuman

TSL 1 (best) BASIC

Gene SYNRG, Length 3,406 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-222ENST00000614941 KNSTRNQ9Y448 316 aa20.28■□□□□ 0.84
SYNRG-222ENST00000614941 COL17A1Q9UMD9 1497 aaPredicted RBP20.28■□□□□ 0.84
SYNRG-222ENST00000614941 ARID3AQ99856 593 aa20.27■□□□□ 0.84
SYNRG-222ENST00000614941 TNNQ9UQP3 1299 aa20.27■□□□□ 0.84
SYNRG-222ENST00000614941 TROQ12816 1431 aaPredicted RBP20.27■□□□□ 0.84
SYNRG-222ENST00000614941 GAS2L3Q86XJ1 694 aa20.26■□□□□ 0.83
SYNRG-222ENST00000614941 CHMP5Q9NZZ3 219 aa20.26■□□□□ 0.83
SYNRG-222ENST00000614941 TMF1P82094 1093 aa20.26■□□□□ 0.83
SYNRG-222ENST00000614941 KIAA1211Q6ZU35 1233 aa20.25■□□□□ 0.83
SYNRG-222ENST00000614941 BCL2L13Q9BXK5 485 aa20.25■□□□□ 0.83
SYNRG-222ENST00000614941 PDZRN3Q9UPQ7 1066 aa20.25■□□□□ 0.83
SYNRG-222ENST00000614941 CGNL1Q0VF96 1302 aa20.25■□□□□ 0.83
SYNRG-222ENST00000614941 PCDHB15Q9Y5E8 787 aa20.25■□□□□ 0.83
SYNRG-222ENST00000614941 CEP170Q5SW79 1584 aa20.25■□□□□ 0.83
SYNRG-222ENST00000614941 ERBINQ96RT1 1412 aa20.24■□□□□ 0.83
SYNRG-222ENST00000614941 KDM5DQ9BY66 1539 aa20.23■□□□□ 0.83
SYNRG-222ENST00000614941 TSPY4P0CV99 314 aa20.23■□□□□ 0.83
SYNRG-222ENST00000614941 TSPY10P0CW01 314 aa20.23■□□□□ 0.83
SYNRG-222ENST00000614941 NEUROD2Q15784 382 aa20.23■□□□□ 0.83
SYNRG-222ENST00000614941 C9orf84Q5VXU9 1444 aa20.23■□□□□ 0.83
SYNRG-222ENST00000614941 TRPM1Q7Z4N2 1603 aa20.22■□□□□ 0.83
SYNRG-222ENST00000614941 NKTRP30414 1462 aaKnown RBP20.22■□□□□ 0.83
SYNRG-222ENST00000614941 CENPJQ9HC77 1338 aaPredicted RBP20.21■□□□□ 0.83
SYNRG-222ENST00000614941 HNRNPMP52272 730 aaKnown RBP eCLIP20.21■□□□□ 0.83
SYNRG-222ENST00000614941 RAPGEF6Q8TEU7 1601 aa20.21■□□□□ 0.83
SYNRG-222ENST00000614941 PDCL3Q9H2J4 239 aa20.21■□□□□ 0.83
SYNRG-222ENST00000614941 DISP1Q96F81 1524 aa20.21■□□□□ 0.83
SYNRG-222ENST00000614941 TRMT2AQ8IZ69 625 aaKnown RBP20.21■□□□□ 0.83
SYNRG-222ENST00000614941 CROCC2H7BZ55 1655 aa20.2■□□□□ 0.82
SYNRG-222ENST00000614941 C22orf23Q9BZE7 217 aa20.2■□□□□ 0.82
SYNRG-222ENST00000614941 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.2■□□□□ 0.823e-6■■□□□ 11.4
SYNRG-222ENST00000614941 CCDC144AA2RUR9 1427 aa20.2■□□□□ 0.82
SYNRG-222ENST00000614941 A0A0U1RQG5 324 aaPredicted RBP20.19■□□□□ 0.82
SYNRG-222ENST00000614941 RLBP1P12271 317 aa20.19■□□□□ 0.82
SYNRG-222ENST00000614941 E9PSI1 815 aa20.18■□□□□ 0.82
SYNRG-222ENST00000614941 TPM2P07951 284 aa20.18■□□□□ 0.82
SYNRG-222ENST00000614941 PDE3AQ14432 1141 aa20.18■□□□□ 0.82
SYNRG-222ENST00000614941 FOXD4L1Q9NU39 408 aa20.18■□□□□ 0.82
SYNRG-222ENST00000614941 ITSN2Q9NZM3 1697 aa20.18■□□□□ 0.82
SYNRG-222ENST00000614941 KIAA0556O60303 1618 aa20.17■□□□□ 0.82
SYNRG-222ENST00000614941 TARBP1Q13395 1621 aaKnown RBP20.17■□□□□ 0.82
SYNRG-222ENST00000614941 IFT140Q96RY7 1462 aa20.17■□□□□ 0.82
SYNRG-222ENST00000614941 MAGI2Q86UL8 1455 aa20.17■□□□□ 0.82
SYNRG-222ENST00000614941 FAM13BQ9NYF5 915 aa20.17■□□□□ 0.82
SYNRG-222ENST00000614941 PLB1Q6P1J6 1458 aa20.16■□□□□ 0.82
SYNRG-222ENST00000614941 DDX11L8A8MPP1 907 aa20.16■□□□□ 0.82
SYNRG-222ENST00000614941 PBRM1Q86U86 1689 aa20.16■□□□□ 0.82
SYNRG-222ENST00000614941 AMER1Q5JTC6 1135 aaPredicted RBP20.16■□□□□ 0.82
SYNRG-222ENST00000614941 RRP7AQ9Y3A4 280 aaKnown RBP20.16■□□□□ 0.82
SYNRG-222ENST00000614941 ADAMTS12P58397 1594 aa20.16■□□□□ 0.82
SYNRG-222ENST00000614941 GPRASP1Q5JY77 1395 aa20.16■□□□□ 0.82
SYNRG-222ENST00000614941 HSCBQ8IWL3 235 aa20.15■□□□□ 0.82
SYNRG-222ENST00000614941 A2MP01023 1474 aa20.14■□□□□ 0.82
SYNRG-222ENST00000614941 PMFBP1Q8TBY8 1022 aa20.14■□□□□ 0.81
SYNRG-222ENST00000614941 TNPO1Q92973 898 aaKnown RBP20.13■□□□□ 0.81
SYNRG-222ENST00000614941 VIRMAQ69YN4 1812 aaKnown RBP20.12■□□□□ 0.81
SYNRG-222ENST00000614941 PTPRGP23470 1445 aa20.12■□□□□ 0.81
SYNRG-222ENST00000614941 ZNF692Q9BU19 519 aaPredicted RBP20.11■□□□□ 0.81
SYNRG-222ENST00000614941 PRDM15P57071 1507 aaPredicted RBP20.11■□□□□ 0.81
SYNRG-222ENST00000614941 RIPK4P57078 832 aa20.1■□□□□ 0.81
SYNRG-222ENST00000614941 EIF4G3O43432 1585 aaKnown RBP20.1■□□□□ 0.81
SYNRG-222ENST00000614941 FAM135AQ9P2D6 1515 aa20.1■□□□□ 0.81
SYNRG-222ENST00000614941 R3HCC1Q9Y3T6 440 aaKnown RBP20.09■□□□□ 0.81
SYNRG-222ENST00000614941 PRDM4Q9UKN5 801 aa20.09■□□□□ 0.81
SYNRG-222ENST00000614941 WDR7Q9Y4E6 1490 aa20.09■□□□□ 0.81
SYNRG-222ENST00000614941 CDC42BPAQ5VT25 1732 aa20.08■□□□□ 0.8
SYNRG-222ENST00000614941 PLEKHD1A6NEE1 506 aa20.07■□□□□ 0.8
SYNRG-222ENST00000614941 RWDD1Q9H446 243 aaPredicted RBP20.07■□□□□ 0.8
SYNRG-222ENST00000614941 PLA2R1Q13018 1463 aa20.07■□□□□ 0.8
SYNRG-222ENST00000614941 NASPP49321 788 aaPredicted RBP20.07■□□□□ 0.8
SYNRG-222ENST00000614941 WWC1Q8IX03 1113 aa20.07■□□□□ 0.8
SYNRG-222ENST00000614941 CALD1Q05682 793 aaKnown RBP20.07■□□□□ 0.8
SYNRG-222ENST00000614941 MSNP26038 577 aaKnown RBP20.06■□□□□ 0.8
SYNRG-222ENST00000614941 RARSP54136 660 aaKnown RBP20.06■□□□□ 0.8
SYNRG-222ENST00000614941 HSP90AB1P08238 724 aaKnown RBP20.05■□□□□ 0.8
SYNRG-222ENST00000614941 ZSCAN30Q86W11 494 aa20.05■□□□□ 0.8
SYNRG-222ENST00000614941 TNNT2P45379 298 aaPredicted RBP20.04■□□□□ 0.8
SYNRG-222ENST00000614941 PRDM10Q9NQV6 1147 aa20.04■□□□□ 0.8
SYNRG-222ENST00000614941 ISY1Q9ULR0 285 aaKnown RBP20.04■□□□□ 0.8
SYNRG-222ENST00000614941 RTEL1-TNFRSF6BF6WH68 1400 aa20.04■□□□□ 0.8
SYNRG-222ENST00000614941 SHANK2Q9UPX8 1470 aa20.04■□□□□ 0.8
SYNRG-222ENST00000614941 OFD1O75665 1012 aa20.03■□□□□ 0.8
SYNRG-222ENST00000614941 GBP4Q96PP9 640 aa20.03■□□□□ 0.8
SYNRG-222ENST00000614941 ADCY10Q96PN6 1610 aa20.03■□□□□ 0.8
SYNRG-222ENST00000614941 ZBTB7CA1YPR0 619 aa20.02■□□□□ 0.8
SYNRG-222ENST00000614941 CLASP1Q7Z460 1538 aa20.02■□□□□ 0.8
SYNRG-222ENST00000614941 XPCQ01831 940 aaPredicted RBP20.01■□□□□ 0.79
SYNRG-222ENST00000614941 ANP32BQ92688 251 aaKnown RBP20.01■□□□□ 0.79
SYNRG-222ENST00000614941 CCDC173Q0VFZ6 552 aa20.01■□□□□ 0.79
SYNRG-222ENST00000614941 PIK3C2GO75747 1445 aa20■□□□□ 0.79
SYNRG-222ENST00000614941 ZHX1Q9UKY1 873 aaPredicted RBP19.99■□□□□ 0.79
SYNRG-222ENST00000614941 NCLP19338 710 aaKnown RBP19.99■□□□□ 0.79
SYNRG-222ENST00000614941 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.99■□□□□ 0.79
SYNRG-222ENST00000614941 CD2BP2O95400 341 aaKnown RBP19.98■□□□□ 0.79
SYNRG-222ENST00000614941 SSFA2P28290 1259 aa19.98■□□□□ 0.79
SYNRG-222ENST00000614941 ASXL1Q8IXJ9 1541 aa19.98■□□□□ 0.79
SYNRG-222ENST00000614941 ABCC10Q5T3U5 1492 aa19.98■□□□□ 0.79
SYNRG-222ENST00000614941 DDIT3P35638 169 aa19.98■□□□□ 0.79
SYNRG-222ENST00000614941 FTSJ3Q8IY81 847 aaKnown RBP19.98■□□□□ 0.79
SYNRG-222ENST00000614941 DDX49Q9Y6V7 483 aaKnown RBP19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms