RNA–Protein interactions for RNA: ENST00000614941.4

SYNRG-222, Transcript of synergin gamma, humanhuman

TSL 1 (best) BASIC

Gene SYNRG, Length 3,406 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-222ENST00000614941 NISCHQ9Y2I1 1504 aa29.94■■■□□ 2.38
SYNRG-222ENST00000614941 HRCP23327 699 aa27.06■■□□□ 1.92
SYNRG-222ENST00000614941 PPARGC1BQ86YN6 1023 aaKnown RBP26.79■■□□□ 1.88
SYNRG-222ENST00000614941 SHROOM4Q9ULL8 1493 aa26.78■■□□□ 1.88
SYNRG-222ENST00000614941 SUPT5HO00267 1087 aaKnown RBP26.73■■□□□ 1.87
SYNRG-222ENST00000614941 PCGF6Q9BYE7 350 aa26.67■■□□□ 1.86
SYNRG-222ENST00000614941 MYO15BQ96JP2 1530 aa26.31■■□□□ 1.8
SYNRG-222ENST00000614941 CHIC1Q5VXU3 224 aa26.12■■□□□ 1.77
SYNRG-222ENST00000614941 PELP1Q8IZL8 1130 aaKnown RBP26.07■■□□□ 1.76
SYNRG-222ENST00000614941 SCAF1Q9H7N4 1312 aaKnown RBP25.78■■□□□ 1.72
SYNRG-222ENST00000614941 LOC105371045A0A1W2PR82 267 aa25.74■■□□□ 1.71
SYNRG-222ENST00000614941 TRIM26Q12899 539 aaPredicted RBP25.54■■□□□ 1.68
SYNRG-222ENST00000614941 DCAF1Q9Y4B6 1507 aa25.52■■□□□ 1.68
SYNRG-222ENST00000614941 ZCCHC6Q5VYS8 1495 aaKnown RBP25.44■■□□□ 1.66
SYNRG-222ENST00000614941 DCAF8L2P0C7V8 631 aa25.28■■□□□ 1.64
SYNRG-222ENST00000614941 ZEB1P37275 1124 aaPredicted RBP25.25■■□□□ 1.63
SYNRG-222ENST00000614941 CCDC180Q9P1Z9 1646 aa25.18■■□□□ 1.62
SYNRG-222ENST00000614941 NEUROD1Q13562 356 aa25.06■■□□□ 1.6
SYNRG-222ENST00000614941 ACIN1Q9UKV3 1341 aaKnown RBP25.02■■□□□ 1.6
SYNRG-222ENST00000614941 MYT1Q01538 1121 aa24.98■■□□□ 1.59
SYNRG-222ENST00000614941 GTF3C3Q9Y5Q9 886 aa24.95■■□□□ 1.58
SYNRG-222ENST00000614941 EHMT2Q96KQ7 1210 aa24.91■■□□□ 1.58
SYNRG-222ENST00000614941 FAM9AQ8IZU1 332 aaPredicted RBP24.81■■□□□ 1.56
SYNRG-222ENST00000614941 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.69■■□□□ 1.54
SYNRG-222ENST00000614941 CENPBP07199 599 aaPredicted RBP24.66■■□□□ 1.54
SYNRG-222ENST00000614941 DIEXFQ68CQ4 756 aaKnown RBP24.6■■□□□ 1.53
SYNRG-222ENST00000614941 CCER1Q8TC90 406 aaPredicted RBP24.58■■□□□ 1.53
SYNRG-222ENST00000614941 TRIM41Q8WV44 630 aa24.55■■□□□ 1.52
SYNRG-222ENST00000614941 YTHDC1Q96MU7 727 aaKnown RBP24.45■■□□□ 1.51
SYNRG-222ENST00000614941 ABCC9O60706 1549 aa24.33■■□□□ 1.49
SYNRG-222ENST00000614941 TTBK1Q5TCY1 1321 aaPredicted RBP24.31■■□□□ 1.48
SYNRG-222ENST00000614941 RSF1Q96T23 1441 aaPredicted RBP24.14■■□□□ 1.46
SYNRG-222ENST00000614941 RB1CC1Q8TDY2 1594 aa24.06■■□□□ 1.44
SYNRG-222ENST00000614941 ZNF316A6NFI3 1004 aaPredicted RBP24.01■■□□□ 1.43
SYNRG-222ENST00000614941 MIER1Q8N108 512 aa24.01■■□□□ 1.43
SYNRG-222ENST00000614941 SCRIBQ14160 1630 aa23.83■■□□□ 1.41
SYNRG-222ENST00000614941 BCL11AQ9H165 835 aa23.74■■□□□ 1.39
SYNRG-222ENST00000614941 SUPT16HQ9Y5B9 1047 aaKnown RBP23.64■■□□□ 1.37
SYNRG-222ENST00000614941 ANP32EQ9BTT0 268 aa23.62■■□□□ 1.37
SYNRG-222ENST00000614941 HNRNPUL2Q1KMD3 747 aaKnown RBP23.58■■□□□ 1.37
SYNRG-222ENST00000614941 TSHZ2Q9NRE2 1034 aa23.57■■□□□ 1.36
SYNRG-222ENST00000614941 CECR2Q9BXF3 1484 aa23.55■■□□□ 1.36
SYNRG-222ENST00000614941 CSRNP3Q8WYN3 585 aa23.5■■□□□ 1.35
SYNRG-222ENST00000614941 MROH2BQ7Z745 1585 aa23.47■■□□□ 1.35
SYNRG-222ENST00000614941 WRNQ14191 1432 aaPredicted RBP eCLIP23.46■■□□□ 1.35
SYNRG-222ENST00000614941 CEP162Q5TB80 1403 aa23.46■■□□□ 1.35
SYNRG-222ENST00000614941 WIZO95785 1651 aa23.39■■□□□ 1.34
SYNRG-222ENST00000614941 BCANQ96GW7 911 aa23.37■■□□□ 1.33
SYNRG-222ENST00000614941 UBTFP17480 764 aaKnown RBP23.35■■□□□ 1.33
SYNRG-222ENST00000614941 CCDC88BA6NC98 1476 aa23.31■■□□□ 1.32
SYNRG-222ENST00000614941 NACADO15069 1562 aa23.29■■□□□ 1.32
SYNRG-222ENST00000614941 ABCC8Q09428 1581 aa23.29■■□□□ 1.32
SYNRG-222ENST00000614941 SOGA1O94964 1423 aa23.26■■□□□ 1.31
SYNRG-222ENST00000614941 TNIKQ9UKE5 1360 aa23.25■■□□□ 1.31
SYNRG-222ENST00000614941 CLSPNQ9HAW4 1339 aa23.24■■□□□ 1.31
SYNRG-222ENST00000614941 EIF4G1Q04637 1599 aaKnown RBP23.21■■□□□ 1.31
SYNRG-222ENST00000614941 KCNH8Q96L42 1107 aa23.15■■□□□ 1.3
SYNRG-222ENST00000614941 RUSC2Q8N2Y8 1516 aa23.14■■□□□ 1.29
SYNRG-222ENST00000614941 BAZ1AQ9NRL2 1556 aaPredicted RBP23.1■■□□□ 1.29
SYNRG-222ENST00000614941 FKBP8Q14318 412 aa23.08■■□□□ 1.28
SYNRG-222ENST00000614941 RANGAP1P46060 587 aaPredicted RBP23.07■■□□□ 1.28
SYNRG-222ENST00000614941 RBM19Q9Y4C8 960 aaKnown RBP23.02■■□□□ 1.28
SYNRG-222ENST00000614941 ITGAEP38570 1179 aa22.99■■□□□ 1.27
SYNRG-222ENST00000614941 GOLGA3Q08378 1498 aa22.96■■□□□ 1.27
SYNRG-222ENST00000614941 UNC13AQ9UPW8 1703 aa22.96■■□□□ 1.27
SYNRG-222ENST00000614941 APLP2Q06481 763 aa22.94■■□□□ 1.26
SYNRG-222ENST00000614941 EEA1Q15075 1411 aa22.9■■□□□ 1.26
SYNRG-222ENST00000614941 MSH5O43196 834 aa22.85■■□□□ 1.25
SYNRG-222ENST00000614941 DHX57Q6P158 1386 aaKnown RBP22.84■■□□□ 1.25
SYNRG-222ENST00000614941 CLIP1P30622 1438 aa22.84■■□□□ 1.25
SYNRG-222ENST00000614941 TOP2AP11388 1531 aaKnown RBP22.84■■□□□ 1.25
SYNRG-222ENST00000614941 SMARCA2P51531 1590 aa22.82■■□□□ 1.24
SYNRG-222ENST00000614941 NEFLP07196 543 aa22.8■■□□□ 1.24
SYNRG-222ENST00000614941 VPS8Q8N3P4 1428 aa22.77■■□□□ 1.23
SYNRG-222ENST00000614941 PRKCSHP14314 528 aaPredicted RBP22.76■■□□□ 1.23
SYNRG-222ENST00000614941 PABPN1Q86U42 306 aaKnown RBP eCLIP22.76■■□□□ 1.23
SYNRG-222ENST00000614941 TRIM52Q96A61 297 aa22.76■■□□□ 1.23
SYNRG-222ENST00000614941 DDX10Q13206 875 aaKnown RBP22.72■■□□□ 1.23
SYNRG-222ENST00000614941 CEP164Q9UPV0 1460 aa22.71■■□□□ 1.23
SYNRG-222ENST00000614941 BICRAQ9NZM4 1560 aa22.7■■□□□ 1.23
SYNRG-222ENST00000614941 ERICH6Q7L0X2 663 aa22.68■■□□□ 1.22
SYNRG-222ENST00000614941 SMARCA4P51532 1647 aa22.61■■□□□ 1.21
SYNRG-222ENST00000614941 HIRIP3Q9BW71 556 aaPredicted RBP22.6■■□□□ 1.21
SYNRG-222ENST00000614941 IRX6P78412 446 aaPredicted RBP22.59■■□□□ 1.21
SYNRG-222ENST00000614941 RAPGEF2Q9Y4G8 1499 aa22.59■■□□□ 1.21
SYNRG-222ENST00000614941 KIF21BO75037 1637 aa22.57■■□□□ 1.2
SYNRG-222ENST00000614941 KANK4Q5T7N3 995 aaPredicted RBP22.56■■□□□ 1.2
SYNRG-222ENST00000614941 SYNJ1O43426 1573 aa22.51■■□□□ 1.19
SYNRG-222ENST00000614941 DEKP35659 375 aaKnown RBP22.47■■□□□ 1.19
SYNRG-222ENST00000614941 CDK11AQ9UQ88 783 aaPredicted RBP22.45■■□□□ 1.18
SYNRG-222ENST00000614941 BAZ1BQ9UIG0 1483 aaKnown RBP22.44■■□□□ 1.18
SYNRG-222ENST00000614941 FANCIQ9NVI1 1328 aa22.44■■□□□ 1.18
SYNRG-222ENST00000614941 SIN3AQ96ST3 1273 aa22.41■■□□□ 1.18
SYNRG-222ENST00000614941 ANP32CO43423 234 aa22.38■■□□□ 1.17
SYNRG-222ENST00000614941 PPP1R15AO75807 674 aaPredicted RBP22.37■■□□□ 1.17
SYNRG-222ENST00000614941 ANO8Q9HCE9 1232 aaPredicted RBP22.36■■□□□ 1.17
SYNRG-222ENST00000614941 NBR1Q14596 966 aa22.36■■□□□ 1.17
SYNRG-222ENST00000614941 DNAJC5BQ9UF47 199 aa22.32■■□□□ 1.16
SYNRG-222ENST00000614941 ARAP1Q96P48 1450 aa22.32■■□□□ 1.16
SYNRG-222ENST00000614941 RRBP1Q9P2E9 1410 aaKnown RBP22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms