RNA–Protein interactions for RNA: ENST00000611963.4

TARDBP-213, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-213ENST00000611963 ZNF142P52746 1687 aaPredicted RBP11.65□□□□□ -0.54
TARDBP-213ENST00000611963 WASHC2CQ9Y4E1 1318 aa11.65□□□□□ -0.54
TARDBP-213ENST00000611963 CAMSAP1Q5T5Y3 1602 aa11.65□□□□□ -0.54
TARDBP-213ENST00000611963 TIMELESSQ9UNS1 1208 aa11.65□□□□□ -0.54
TARDBP-213ENST00000611963 CEP170BQ9Y4F5 1589 aaPredicted RBP11.65□□□□□ -0.54
TARDBP-213ENST00000611963 PPP1R15AO75807 674 aaPredicted RBP11.64□□□□□ -0.55
TARDBP-213ENST00000611963 ZC3H13Q5T200 1668 aaKnown RBP11.64□□□□□ -0.55
TARDBP-213ENST00000611963 L3MBTL2Q969R5 705 aa11.63□□□□□ -0.55
TARDBP-213ENST00000611963 TRPM2O94759 1503 aa11.63□□□□□ -0.55
TARDBP-213ENST00000611963 CLTCL1P53675 1640 aa11.63□□□□□ -0.55
TARDBP-213ENST00000611963 TNRQ92752 1358 aa11.63□□□□□ -0.55
TARDBP-213ENST00000611963 CCDC144AA2RUR9 1427 aa11.62□□□□□ -0.55
TARDBP-213ENST00000611963 PTPRTO14522 1441 aa11.62□□□□□ -0.55
TARDBP-213ENST00000611963 A2ML1A8K2U0 1454 aa11.62□□□□□ -0.55
TARDBP-213ENST00000611963 UGGT1Q9NYU2 1555 aa11.6□□□□□ -0.55
TARDBP-213ENST00000611963 FBXO41Q8TF61 875 aa11.6□□□□□ -0.55
TARDBP-213ENST00000611963 NCKAP5LQ9HCH0 1330 aa11.6□□□□□ -0.55
TARDBP-213ENST00000611963 SPATA31D1Q6ZQQ2 1576 aa11.59□□□□□ -0.55
TARDBP-213ENST00000611963 KIF1BO60333 1816 aa11.59□□□□□ -0.55
TARDBP-213ENST00000611963 CERKQ8TCT0 537 aa11.59□□□□□ -0.55
TARDBP-213ENST00000611963 ERVK-7P63135 1459 aa11.58□□□□□ -0.56
TARDBP-213ENST00000611963 NLRP1Q9C000 1473 aa11.57□□□□□ -0.56
TARDBP-213ENST00000611963 LTBP4Q8N2S1 1624 aa11.57□□□□□ -0.56
TARDBP-213ENST00000611963 ARHGAP31Q2M1Z3 1444 aa11.57□□□□□ -0.56
TARDBP-213ENST00000611963 ZNF316A6NFI3 1004 aaPredicted RBP11.56□□□□□ -0.56
TARDBP-213ENST00000611963 SYNMO15061 1565 aa11.56□□□□□ -0.56
TARDBP-213ENST00000611963 NBPF8Q3BBV2 869 aa11.56□□□□□ -0.56
TARDBP-213ENST00000611963 RGL3Q3MIN7 710 aa11.56□□□□□ -0.56
TARDBP-213ENST00000611963 RBM42Q9BTD8 480 aaKnown RBP11.56□□□□□ -0.56
TARDBP-213ENST00000611963 NEURL4Q96JN8 1562 aa11.55□□□□□ -0.56
TARDBP-213ENST00000611963 SPATA31E1Q6ZUB1 1445 aa11.55□□□□□ -0.56
TARDBP-213ENST00000611963 NOS1P29475 1434 aa11.54□□□□□ -0.56
TARDBP-213ENST00000611963 MYO5BQ9ULV0 1848 aa11.54□□□□□ -0.56
TARDBP-213ENST00000611963 ZNF326Q5BKZ1 582 aaKnown RBP11.54□□□□□ -0.56
TARDBP-213ENST00000611963 KDM2AQ9Y2K7 1162 aa11.54□□□□□ -0.56
TARDBP-213ENST00000611963 PIK3C2BO00750 1634 aa11.53□□□□□ -0.56
TARDBP-213ENST00000611963 THEMISQ8N1K5 641 aaPredicted RBP11.52□□□□□ -0.57
TARDBP-213ENST00000611963 DCAF11Q8TEB1 546 aa11.52□□□□□ -0.57
TARDBP-213ENST00000611963 ZNF335Q9H4Z2 1342 aaPredicted RBP11.52□□□□□ -0.57
TARDBP-213ENST00000611963 POLR1AO95602 1720 aaPredicted RBP11.52□□□□□ -0.57
TARDBP-213ENST00000611963 IFT172Q9UG01 1749 aa11.52□□□□□ -0.57
TARDBP-213ENST00000611963 ADGRB3O60242 1522 aa11.51□□□□□ -0.57
TARDBP-213ENST00000611963 UBR1Q8IWV7 1749 aa11.5□□□□□ -0.57
TARDBP-213ENST00000611963 PRAG1Q86YV5 1406 aa11.5□□□□□ -0.57
TARDBP-213ENST00000611963 MED14O60244 1454 aa11.5□□□□□ -0.57
TARDBP-213ENST00000611963 TRPM1Q7Z4N2 1603 aa11.49□□□□□ -0.57
TARDBP-213ENST00000611963 CHGAP10645 457 aaKnown RBP11.49□□□□□ -0.57
TARDBP-213ENST00000611963 ANKLE2Q86XL3 938 aa11.49□□□□□ -0.57
TARDBP-213ENST00000611963 RALGAPBQ86X10 1494 aa11.49□□□□□ -0.57
TARDBP-213ENST00000611963 PPLO60437 1756 aa11.49□□□□□ -0.57
TARDBP-213ENST00000611963 HIRIP3Q9BW71 556 aaPredicted RBP11.48□□□□□ -0.57
TARDBP-213ENST00000611963 ARHGAP23Q9P227 1491 aa11.48□□□□□ -0.57
TARDBP-213ENST00000611963 IQSEC2Q5JU85 1478 aa11.47□□□□□ -0.57
TARDBP-213ENST00000611963 NPHP4O75161 1426 aaPredicted RBP11.47□□□□□ -0.57
TARDBP-213ENST00000611963 SLIT1O75093 1534 aa11.46□□□□□ -0.57
TARDBP-213ENST00000611963 HSPA5P11021 654 aaKnown RBP11.46□□□□□ -0.57
TARDBP-213ENST00000611963 IDI1Q13907 227 aa11.46□□□□□ -0.57
TARDBP-213ENST00000611963 TMEM131LA2VDJ0 1609 aa11.46□□□□□ -0.58
TARDBP-213ENST00000611963 LTKP29376 864 aa11.45□□□□□ -0.58
TARDBP-213ENST00000611963 ZNF692Q9BU19 519 aaPredicted RBP11.45□□□□□ -0.58
TARDBP-213ENST00000611963 IQGAP1P46940 1657 aa11.45□□□□□ -0.58
TARDBP-213ENST00000611963 SPDYE2BA6NHP3 402 aa11.44□□□□□ -0.58
TARDBP-213ENST00000611963 SPDYE6P0CI01 402 aa11.44□□□□□ -0.58
TARDBP-213ENST00000611963 SPDYE2Q495Y8 402 aa11.44□□□□□ -0.58
TARDBP-213ENST00000611963 SLC52A1Q9NWF4 448 aa11.44□□□□□ -0.58
TARDBP-213ENST00000611963 MYOM2P54296 1465 aa11.44□□□□□ -0.58
TARDBP-213ENST00000611963 SCAF11Q99590 1463 aaKnown RBP11.44□□□□□ -0.58
TARDBP-213ENST00000611963 TMEM2Q9UHN6 1383 aa11.43□□□□□ -0.58
TARDBP-213ENST00000611963 KDM5AP29375 1690 aaKnown RBP11.43□□□□□ -0.58
TARDBP-213ENST00000611963 EIF4G2P78344 907 aaKnown RBP eCLIP11.43□□□□□ -0.588e-11■■□□□ 12.1
TARDBP-213ENST00000611963 AKT1S1Q96B36 256 aa11.43□□□□□ -0.58
TARDBP-213ENST00000611963 NEXMIFQ5QGS0 1516 aa11.43□□□□□ -0.58
TARDBP-213ENST00000611963 ROCK2O75116 1388 aaKnown RBP11.42□□□□□ -0.58
TARDBP-213ENST00000611963 ADGRF5Q8IZF2 1346 aa11.42□□□□□ -0.58
TARDBP-213ENST00000611963 NBPF1Q3BBV0 1214 aa11.42□□□□□ -0.58
TARDBP-213ENST00000611963 TXNDC2Q86VQ3 553 aa11.42□□□□□ -0.58
TARDBP-213ENST00000611963 REM2Q8IYK8 340 aaPredicted RBP11.42□□□□□ -0.58
TARDBP-213ENST00000611963 LAMC1P11047 1609 aa11.42□□□□□ -0.58
TARDBP-213ENST00000611963 USP47Q96K76 1375 aa11.41□□□□□ -0.58
TARDBP-213ENST00000611963 CPS1P31327 1500 aa11.41□□□□□ -0.58
TARDBP-213ENST00000611963 KIAA1210Q9ULL0 1709 aa11.41□□□□□ -0.58
TARDBP-213ENST00000611963 DIEXFQ68CQ4 756 aaKnown RBP11.41□□□□□ -0.58
TARDBP-213ENST00000611963 CARD11Q9BXL7 1154 aa11.41□□□□□ -0.58
TARDBP-213ENST00000611963 STRCP1A6NGW2 1772 aa11.41□□□□□ -0.58
TARDBP-213ENST00000611963 NRXN1Q9ULB1 1477 aa11.4□□□□□ -0.58
TARDBP-213ENST00000611963 GPRASP1Q5JY77 1395 aa11.4□□□□□ -0.59
TARDBP-213ENST00000611963 NUTM2DQ5VT03 806 aaPredicted RBP11.39□□□□□ -0.59
TARDBP-213ENST00000611963 STAG3Q9UJ98 1225 aa11.39□□□□□ -0.59
TARDBP-213ENST00000611963 RPGRIP1LQ68CZ1 1315 aa11.38□□□□□ -0.59
TARDBP-213ENST00000611963 STAC3Q96MF2 364 aa11.38□□□□□ -0.59
TARDBP-213ENST00000611963 EID1Q9Y6B2 187 aa11.38□□□□□ -0.59
TARDBP-213ENST00000611963 ZFYVE9O95405 1425 aa11.37□□□□□ -0.59
TARDBP-213ENST00000611963 SSUH2Q9Y2M2 353 aa11.37□□□□□ -0.59
TARDBP-213ENST00000611963 PIK3C2GO75747 1445 aa11.36□□□□□ -0.59
TARDBP-213ENST00000611963 LRRC7Q96NW7 1537 aa11.36□□□□□ -0.59
TARDBP-213ENST00000611963 UBAP1LF5GYI3 381 aa11.36□□□□□ -0.59
TARDBP-213ENST00000611963 CFAP70Q5T0N1 1121 aa11.36□□□□□ -0.59
TARDBP-213ENST00000611963 RIMS2Q9UQ26 1411 aa11.35□□□□□ -0.59
TARDBP-213ENST00000611963 ALKQ9UM73 1620 aa11.35□□□□□ -0.59
TARDBP-213ENST00000611963 ST20-MTHFSA0A0A6YYL1 179 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms