RNA–Protein interactions for RNA: ENST00000608568.1

SSX9-202, Transcript of Protein SSX9, humanhuman

TSL 4 BASIC

Gene SSX9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX9-202ENST00000608568 MYOM3Q5VTT5 1437 aa7.34□□□□□ -1.23
SSX9-202ENST00000608568 SYNMO15061 1565 aa7.33□□□□□ -1.24
SSX9-202ENST00000608568 CFAP44Q96MT7 982 aa7.33□□□□□ -1.24
SSX9-202ENST00000608568 DHX29Q7Z478 1369 aaKnown RBP7.33□□□□□ -1.24
SSX9-202ENST00000608568 ERVK-7P63135 1459 aa7.32□□□□□ -1.24
SSX9-202ENST00000608568 SHANK2Q9UPX8 1470 aa7.32□□□□□ -1.24
SSX9-202ENST00000608568 ZNF316A6NFI3 1004 aaPredicted RBP7.32□□□□□ -1.24
SSX9-202ENST00000608568 CERKQ8TCT0 537 aa7.32□□□□□ -1.24
SSX9-202ENST00000608568 DUOX2Q9NRD8 1548 aa7.32□□□□□ -1.24
SSX9-202ENST00000608568 GGT6Q6P531 493 aa7.31□□□□□ -1.24
SSX9-202ENST00000608568 NCKAP5LQ9HCH0 1330 aa7.3□□□□□ -1.24
SSX9-202ENST00000608568 UGGT1Q9NYU2 1555 aa7.3□□□□□ -1.24
SSX9-202ENST00000608568 ABCC5O15440 1437 aa7.3□□□□□ -1.24
SSX9-202ENST00000608568 ECM2O94769 699 aaPredicted RBP7.3□□□□□ -1.24
SSX9-202ENST00000608568 E9PCH4 1651 aa7.3□□□□□ -1.24
SSX9-202ENST00000608568 KDM5AP29375 1690 aaKnown RBP7.3□□□□□ -1.24
SSX9-202ENST00000608568 TNRQ92752 1358 aa7.3□□□□□ -1.24
SSX9-202ENST00000608568 IQSEC2Q5JU85 1478 aa7.3□□□□□ -1.24
SSX9-202ENST00000608568 ZNF335Q9H4Z2 1342 aaPredicted RBP7.29□□□□□ -1.24
SSX9-202ENST00000608568 UNC13BO14795 1591 aa7.29□□□□□ -1.24
SSX9-202ENST00000608568 DAPK1P53355 1430 aa7.29□□□□□ -1.24
SSX9-202ENST00000608568 FGD6Q6ZV73 1430 aa7.29□□□□□ -1.24
SSX9-202ENST00000608568 FBXO31Q5XUX0 539 aaPredicted RBP7.29□□□□□ -1.24
SSX9-202ENST00000608568 SPRYD3Q8NCJ5 442 aa7.29□□□□□ -1.24
SSX9-202ENST00000608568 SPOCK2Q92563 424 aa7.29□□□□□ -1.24
SSX9-202ENST00000608568 TET3O43151 1660 aa7.28□□□□□ -1.24
SSX9-202ENST00000608568 MIA2Q96PC5 1412 aa7.28□□□□□ -1.24
SSX9-202ENST00000608568 EFCAB6Q5THR3 1501 aa7.28□□□□□ -1.24
SSX9-202ENST00000608568 KIF3BO15066 747 aa7.28□□□□□ -1.24
SSX9-202ENST00000608568 CCER1Q8TC90 406 aaPredicted RBP7.28□□□□□ -1.24
SSX9-202ENST00000608568 AKT1S1Q96B36 256 aa7.28□□□□□ -1.24
SSX9-202ENST00000608568 POLA2Q14181 598 aa7.27□□□□□ -1.25
SSX9-202ENST00000608568 ERICH6BQ5W0A0 696 aa7.27□□□□□ -1.25
SSX9-202ENST00000608568 ESF1Q9H501 851 aaKnown RBP7.27□□□□□ -1.25
SSX9-202ENST00000608568 TSHZ2Q9NRE2 1034 aa7.27□□□□□ -1.25
SSX9-202ENST00000608568 NLRP1Q9C000 1473 aa7.27□□□□□ -1.25
SSX9-202ENST00000608568 CHD2O14647 1828 aaKnown RBP7.27□□□□□ -1.25
SSX9-202ENST00000608568 KIF15Q9NS87 1388 aa7.26□□□□□ -1.25
SSX9-202ENST00000608568 KLHL34Q8N239 644 aa7.26□□□□□ -1.25
SSX9-202ENST00000608568 SPHKAPQ2M3C7 1700 aa7.26□□□□□ -1.25
SSX9-202ENST00000608568 ERBINQ96RT1 1412 aa7.26□□□□□ -1.25
SSX9-202ENST00000608568 MED1Q15648 1581 aaPredicted RBP7.25□□□□□ -1.25
SSX9-202ENST00000608568 MED14O60244 1454 aa7.25□□□□□ -1.25
SSX9-202ENST00000608568 ADGRL2O95490 1459 aa7.25□□□□□ -1.25
SSX9-202ENST00000608568 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.25□□□□□ -1.25
SSX9-202ENST00000608568 HAX1O00165 279 aa7.25□□□□□ -1.25
SSX9-202ENST00000608568 IQGAP3Q86VI3 1631 aa7.25□□□□□ -1.25
SSX9-202ENST00000608568 ADGRB3O60242 1522 aa7.25□□□□□ -1.25
SSX9-202ENST00000608568 SLIT1O75093 1534 aa7.25□□□□□ -1.25
SSX9-202ENST00000608568 LMTK2Q8IWU2 1503 aa7.25□□□□□ -1.25
SSX9-202ENST00000608568 ARHGAP23Q9P227 1491 aa7.24□□□□□ -1.25
SSX9-202ENST00000608568 TMEM131LA2VDJ0 1609 aa7.24□□□□□ -1.25
SSX9-202ENST00000608568 CPS1P31327 1500 aa7.24□□□□□ -1.25
SSX9-202ENST00000608568 SUPT16HQ9Y5B9 1047 aaKnown RBP7.24□□□□□ -1.25
SSX9-202ENST00000608568 PIP4P2Q8N4L2 257 aa7.23□□□□□ -1.25
SSX9-202ENST00000608568 NPHP4O75161 1426 aaPredicted RBP7.23□□□□□ -1.25
SSX9-202ENST00000608568 NWD1Q149M9 1564 aa7.23□□□□□ -1.25
SSX9-202ENST00000608568 SCAF11Q99590 1463 aaKnown RBP7.22□□□□□ -1.25
SSX9-202ENST00000608568 LRRC7Q96NW7 1537 aa7.22□□□□□ -1.25
SSX9-202ENST00000608568 ARHGAP31Q2M1Z3 1444 aa7.21□□□□□ -1.25
SSX9-202ENST00000608568 NRXN3Q9Y4C0 1643 aa7.21□□□□□ -1.26
SSX9-202ENST00000608568 ILDR2Q71H61 639 aa7.21□□□□□ -1.26
SSX9-202ENST00000608568 ROBO1Q9Y6N7 1651 aa7.21□□□□□ -1.26
SSX9-202ENST00000608568 WASHC2CQ9Y4E1 1318 aa7.21□□□□□ -1.26
SSX9-202ENST00000608568 SETD1AO15047 1707 aaKnown RBP7.21□□□□□ -1.26
SSX9-202ENST00000608568 KIF1BO60333 1816 aa7.2□□□□□ -1.26
SSX9-202ENST00000608568 NOS1P29475 1434 aa7.19□□□□□ -1.26
SSX9-202ENST00000608568 RGL2O15211 777 aa7.19□□□□□ -1.26
SSX9-202ENST00000608568 TSPY4P0CV99 314 aa7.19□□□□□ -1.26
SSX9-202ENST00000608568 TSPY10P0CW01 314 aa7.19□□□□□ -1.26
SSX9-202ENST00000608568 NBR1Q14596 966 aa7.19□□□□□ -1.26
SSX9-202ENST00000608568 RRP7BPQ9NSQ0 103 aa7.19□□□□□ -1.26
SSX9-202ENST00000608568 TIMELESSQ9UNS1 1208 aa7.19□□□□□ -1.26
SSX9-202ENST00000608568 CLTCL1P53675 1640 aa7.19□□□□□ -1.26
SSX9-202ENST00000608568 DISP3Q9P2K9 1392 aa7.19□□□□□ -1.26
SSX9-202ENST00000608568 RSPH4AQ5TD94 716 aa7.18□□□□□ -1.26
SSX9-202ENST00000608568 CHIC2Q9UKJ5 165 aa7.18□□□□□ -1.26
SSX9-202ENST00000608568 ZBTB12Q9Y330 459 aaPredicted RBP7.18□□□□□ -1.26
SSX9-202ENST00000608568 PHLPP1O60346 1717 aa7.18□□□□□ -1.26
SSX9-202ENST00000608568 XRN1Q8IZH2 1706 aaKnown RBP7.18□□□□□ -1.26
SSX9-202ENST00000608568 UBAP1LF5GYI3 381 aa7.17□□□□□ -1.26
SSX9-202ENST00000608568 TULP1O00294 542 aaPredicted RBP7.17□□□□□ -1.26
SSX9-202ENST00000608568 REM2Q8IYK8 340 aaPredicted RBP7.17□□□□□ -1.26
SSX9-202ENST00000608568 STAG3Q9UJ98 1225 aa7.17□□□□□ -1.26
SSX9-202ENST00000608568 NALCNQ8IZF0 1738 aa7.17□□□□□ -1.26
SSX9-202ENST00000608568 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.17□□□□□ -1.26
SSX9-202ENST00000608568 IFT172Q9UG01 1749 aa7.17□□□□□ -1.26
SSX9-202ENST00000608568 PPLO60437 1756 aa7.17□□□□□ -1.26
SSX9-202ENST00000608568 LTKP29376 864 aa7.16□□□□□ -1.26
SSX9-202ENST00000608568 FANCIQ9NVI1 1328 aa7.16□□□□□ -1.26
SSX9-202ENST00000608568 ANKRD30AQ9BXX3 1397 aa7.16□□□□□ -1.26
SSX9-202ENST00000608568 ZFYVE9O95405 1425 aa7.16□□□□□ -1.26
SSX9-202ENST00000608568 UBE2Q2Q8WVN8 375 aa7.15□□□□□ -1.26
SSX9-202ENST00000608568 ARXQ96QS3 562 aa7.15□□□□□ -1.26
SSX9-202ENST00000608568 ANKRD50Q9ULJ7 1429 aa7.15□□□□□ -1.27
SSX9-202ENST00000608568 HSPA1LP34931 641 aa7.14□□□□□ -1.27
SSX9-202ENST00000608568 COL16A1Q07092 1604 aaPredicted RBP7.14□□□□□ -1.27
SSX9-202ENST00000608568 RPRD2Q5VT52 1461 aaKnown RBP7.14□□□□□ -1.27
SSX9-202ENST00000608568 MIER1Q8N108 512 aa7.14□□□□□ -1.27
SSX9-202ENST00000608568 TMEM2Q9UHN6 1383 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms