RNA–Protein interactions for RNA: ENST00000606273.3

HLA-F-230, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 579 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-230ENST00000606273 CPS1P31327 1500 aa19.98■□□□□ 0.79
HLA-F-230ENST00000606273 GOLGA2Q08379 1002 aa19.97■□□□□ 0.79
HLA-F-230ENST00000606273 RGS17Q9UGC6 210 aaPredicted RBP19.97■□□□□ 0.79
HLA-F-230ENST00000606273 MYO3AQ8NEV4 1616 aa19.97■□□□□ 0.79
HLA-F-230ENST00000606273 HNRNPMP52272 730 aaKnown RBP eCLIP19.96■□□□□ 0.79
HLA-F-230ENST00000606273 ZNF777Q9ULD5 760 aaPredicted RBP19.96■□□□□ 0.79
HLA-F-230ENST00000606273 ZNF142P52746 1687 aaPredicted RBP19.96■□□□□ 0.79
HLA-F-230ENST00000606273 MKRN3Q13064 507 aaKnown RBP19.94■□□□□ 0.78
HLA-F-230ENST00000606273 A2ML1A8K2U0 1454 aa19.93■□□□□ 0.78
HLA-F-230ENST00000606273 ARHGAP35Q9NRY4 1499 aa19.93■□□□□ 0.78
HLA-F-230ENST00000606273 SAMD9LQ8IVG5 1584 aa19.93■□□□□ 0.78
HLA-F-230ENST00000606273 UBTFP17480 764 aaKnown RBP19.93■□□□□ 0.78
HLA-F-230ENST00000606273 ITSN2Q9NZM3 1697 aa19.93■□□□□ 0.78
HLA-F-230ENST00000606273 CLTCQ00610 1675 aaKnown RBP19.91■□□□□ 0.78
HLA-F-230ENST00000606273 PREX2Q70Z35 1606 aa19.91■□□□□ 0.78
HLA-F-230ENST00000606273 ANKLE2Q86XL3 938 aa19.9■□□□□ 0.78
HLA-F-230ENST00000606273 ALKQ9UM73 1620 aa19.9■□□□□ 0.78
HLA-F-230ENST00000606273 A2MP01023 1474 aa19.89■□□□□ 0.77
HLA-F-230ENST00000606273 DNMT1P26358 1616 aaKnown RBP19.89■□□□□ 0.77
HLA-F-230ENST00000606273 FBXO31Q5XUX0 539 aaPredicted RBP19.88■□□□□ 0.77
HLA-F-230ENST00000606273 SUPT6HQ7KZ85 1726 aaKnown RBP19.88■□□□□ 0.77
HLA-F-230ENST00000606273 PDCD7Q8N8D1 485 aaKnown RBP19.86■□□□□ 0.77
HLA-F-230ENST00000606273 NEURL4Q96JN8 1562 aa19.86■□□□□ 0.77
HLA-F-230ENST00000606273 THEMISQ8N1K5 641 aaPredicted RBP19.85■□□□□ 0.77
HLA-F-230ENST00000606273 FAM163AQ96GL9 167 aaPredicted RBP19.85■□□□□ 0.77
HLA-F-230ENST00000606273 PLXNC1O60486 1568 aa19.84■□□□□ 0.77
HLA-F-230ENST00000606273 SLAIN1Q8ND83 568 aa19.84■□□□□ 0.77
HLA-F-230ENST00000606273 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.83■□□□□ 0.77
HLA-F-230ENST00000606273 VWDEQ8N2E2 1590 aa19.83■□□□□ 0.77
HLA-F-230ENST00000606273 CABP2Q9NPB3 220 aa19.83■□□□□ 0.77
HLA-F-230ENST00000606273 KIAA1107Q9UPP5 1409 aa19.83■□□□□ 0.76
HLA-F-230ENST00000606273 TNRQ92752 1358 aa19.83■□□□□ 0.76
HLA-F-230ENST00000606273 ATP7AQ04656 1500 aa19.82■□□□□ 0.76
HLA-F-230ENST00000606273 POTEMA6NI47 508 aa19.82■□□□□ 0.76
HLA-F-230ENST00000606273 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.82■□□□□ 0.76
HLA-F-230ENST00000606273 SYCP2Q9BX26 1530 aa19.81■□□□□ 0.76
HLA-F-230ENST00000606273 GPATCH8Q9UKJ3 1502 aaKnown RBP19.81■□□□□ 0.76
HLA-F-230ENST00000606273 POTEAQ6S8J7 498 aa19.81■□□□□ 0.76
HLA-F-230ENST00000606273 LRRIQ1Q96JM4 1722 aa19.81■□□□□ 0.76
HLA-F-230ENST00000606273 NPHP4O75161 1426 aaPredicted RBP19.79■□□□□ 0.76
HLA-F-230ENST00000606273 LCE2DQ5TA82 110 aaPredicted RBP19.79■□□□□ 0.76
HLA-F-230ENST00000606273 POTEGQ6S5H5 508 aa19.79■□□□□ 0.76
HLA-F-230ENST00000606273 CFDP1Q9UEE9 299 aaPredicted RBP19.79■□□□□ 0.76
HLA-F-230ENST00000606273 MED14O60244 1454 aa19.79■□□□□ 0.76
HLA-F-230ENST00000606273 CDC42BPAQ5VT25 1732 aa19.78■□□□□ 0.76
HLA-F-230ENST00000606273 LRRC7Q96NW7 1537 aa19.77■□□□□ 0.76
HLA-F-230ENST00000606273 CCDC18Q5T9S5 1454 aa19.77■□□□□ 0.76
HLA-F-230ENST00000606273 CASKIN1Q8WXD9 1431 aa19.76■□□□□ 0.75
HLA-F-230ENST00000606273 INO80Q9ULG1 1556 aaPredicted RBP19.74■□□□□ 0.75
HLA-F-230ENST00000606273 POLR1AO95602 1720 aaPredicted RBP19.74■□□□□ 0.75
HLA-F-230ENST00000606273 MIA2Q96PC5 1412 aa19.74■□□□□ 0.75
HLA-F-230ENST00000606273 PLEKHH2Q8IVE3 1493 aa19.73■□□□□ 0.75
HLA-F-230ENST00000606273 DHX29Q7Z478 1369 aaKnown RBP19.73■□□□□ 0.75
HLA-F-230ENST00000606273 KIF3BO15066 747 aa19.72■□□□□ 0.75
HLA-F-230ENST00000606273 RNF25Q96BH1 459 aaPredicted RBP19.72■□□□□ 0.75
HLA-F-230ENST00000606273 WASHC2CQ9Y4E1 1318 aa19.72■□□□□ 0.75
HLA-F-230ENST00000606273 RIOK3O14730 519 aaKnown RBP19.71■□□□□ 0.75
HLA-F-230ENST00000606273 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.71■□□□□ 0.75
HLA-F-230ENST00000606273 PZPP20742 1482 aa19.71■□□□□ 0.75
HLA-F-230ENST00000606273 L3MBTL3Q96JM7 780 aaPredicted RBP19.7■□□□□ 0.74
HLA-F-230ENST00000606273 ZNF644Q9H582 1327 aaPredicted RBP19.7■□□□□ 0.74
HLA-F-230ENST00000606273 FAM135AQ9P2D6 1515 aa19.69■□□□□ 0.74
HLA-F-230ENST00000606273 NLRP1Q9C000 1473 aa19.68■□□□□ 0.74
HLA-F-230ENST00000606273 UGGT1Q9NYU2 1555 aa19.68■□□□□ 0.74
HLA-F-230ENST00000606273 DEPDC5O75140 1603 aa19.68■□□□□ 0.74
HLA-F-230ENST00000606273 CCNB3Q8WWL7 1395 aa19.67■□□□□ 0.74
HLA-F-230ENST00000606273 RTEL1-TNFRSF6BF6WH68 1400 aa19.67■□□□□ 0.74
HLA-F-230ENST00000606273 DPY19L2Q6NUT2 758 aa19.66■□□□□ 0.74
HLA-F-230ENST00000606273 ADGBQ8N7X0 1667 aa19.65■□□□□ 0.74
HLA-F-230ENST00000606273 FAM135BQ49AJ0 1406 aa19.64■□□□□ 0.73
HLA-F-230ENST00000606273 MBD5Q9P267 1494 aa19.64■□□□□ 0.73
HLA-F-230ENST00000606273 RNF17Q9BXT8 1623 aaKnown RBP19.64■□□□□ 0.73
HLA-F-230ENST00000606273 STRCP1A6NGW2 1772 aa19.64■□□□□ 0.73
HLA-F-230ENST00000606273 C3orf67Q6ZVT6 689 aa19.62■□□□□ 0.73
HLA-F-230ENST00000606273 EFCAB3Q8N7B9 438 aa19.62■□□□□ 0.73
HLA-F-230ENST00000606273 IQGAP1P46940 1657 aa19.62■□□□□ 0.73
HLA-F-230ENST00000606273 KDM5DQ9BY66 1539 aa19.61■□□□□ 0.73
HLA-F-230ENST00000606273 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.59■□□□□ 0.73
HLA-F-230ENST00000606273 VGFO15240 615 aaPredicted RBP19.59■□□□□ 0.73
HLA-F-230ENST00000606273 ZFP91Q96JP5 570 aaPredicted RBP19.59■□□□□ 0.73
HLA-F-230ENST00000606273 SYNMO15061 1565 aa19.58■□□□□ 0.73
HLA-F-230ENST00000606273 FYCO1Q9BQS8 1478 aa19.57■□□□□ 0.72
HLA-F-230ENST00000606273 LTKP29376 864 aa19.57■□□□□ 0.72
HLA-F-230ENST00000606273 UPF1Q92900 1129 aaKnown RBP eCLIP19.56■□□□□ 0.72
HLA-F-230ENST00000606273 TXNDC2Q86VQ3 553 aa19.55■□□□□ 0.72
HLA-F-230ENST00000606273 ST18O60284 1047 aa19.53■□□□□ 0.72
HLA-F-230ENST00000606273 RSPH4AQ5TD94 716 aa19.52■□□□□ 0.72
HLA-F-230ENST00000606273 BOLA1Q9Y3E2 137 aa19.51■□□□□ 0.71
HLA-F-230ENST00000606273 MTUS2Q5JR59 1369 aa19.51■□□□□ 0.71
HLA-F-230ENST00000606273 SCAF11Q99590 1463 aaKnown RBP19.5■□□□□ 0.71
HLA-F-230ENST00000606273 PLSCR2Q9NRY7 297 aa19.5■□□□□ 0.71
HLA-F-230ENST00000606273 ZC3H13Q5T200 1668 aaKnown RBP19.49■□□□□ 0.71
HLA-F-230ENST00000606273 G3V3G9 751 aa19.49■□□□□ 0.71
HLA-F-230ENST00000606273 ECM2O94769 699 aaPredicted RBP19.49■□□□□ 0.71
HLA-F-230ENST00000606273 TMEM94Q12767 1356 aa19.48■□□□□ 0.71
HLA-F-230ENST00000606273 SNPHO15079 494 aa19.47■□□□□ 0.71
HLA-F-230ENST00000606273 RBM33Q96EV2 1170 aaKnown RBP19.46■□□□□ 0.71
HLA-F-230ENST00000606273 EID1Q9Y6B2 187 aa19.46■□□□□ 0.71
HLA-F-230ENST00000606273 NCOA2Q15596 1464 aa19.46■□□□□ 0.71
HLA-F-230ENST00000606273 SETD1AO15047 1707 aaKnown RBP19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms