RNA–Protein interactions for RNA: ENST00000604254.5

FOCAD-213, Transcript of focadhesin, humanhuman

TSL 5

Gene FOCAD, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-213ENST00000604254 PIK3C2BO00750 1634 aa8.92□□□□□ -0.98
FOCAD-213ENST00000604254 NEURL4Q96JN8 1562 aa8.92□□□□□ -0.98
FOCAD-213ENST00000604254 MKRN4PQ13434 485 aaPredicted RBP8.92□□□□□ -0.98
FOCAD-213ENST00000604254 KDM5AP29375 1690 aaKnown RBP8.91□□□□□ -0.98
FOCAD-213ENST00000604254 IQGAP1P46940 1657 aa8.91□□□□□ -0.98
FOCAD-213ENST00000604254 SYNMO15061 1565 aa8.91□□□□□ -0.98
FOCAD-213ENST00000604254 E9PCH4 1651 aa8.91□□□□□ -0.98
FOCAD-213ENST00000604254 RPRD2Q5VT52 1461 aaKnown RBP8.9□□□□□ -0.98
FOCAD-213ENST00000604254 ZNF335Q9H4Z2 1342 aaPredicted RBP8.9□□□□□ -0.98
FOCAD-213ENST00000604254 NCKAP5LQ9HCH0 1330 aa8.9□□□□□ -0.98
FOCAD-213ENST00000604254 MYO5BQ9ULV0 1848 aa8.89□□□□□ -0.99
FOCAD-213ENST00000604254 TOM1O60784 492 aa8.89□□□□□ -0.99
FOCAD-213ENST00000604254 HSPA1LP34931 641 aa8.89□□□□□ -0.99
FOCAD-213ENST00000604254 ADGRB3O60242 1522 aa8.89□□□□□ -0.99
FOCAD-213ENST00000604254 THEMISQ8N1K5 641 aaPredicted RBP8.88□□□□□ -0.99
FOCAD-213ENST00000604254 SPHKAPQ2M3C7 1700 aa8.88□□□□□ -0.99
FOCAD-213ENST00000604254 CPS1P31327 1500 aa8.87□□□□□ -0.99
FOCAD-213ENST00000604254 NOS1P29475 1434 aa8.87□□□□□ -0.99
FOCAD-213ENST00000604254 SLIT1O75093 1534 aa8.86□□□□□ -0.99
FOCAD-213ENST00000604254 MED14O60244 1454 aa8.86□□□□□ -0.99
FOCAD-213ENST00000604254 SCAF11Q99590 1463 aaKnown RBP8.86□□□□□ -0.99
FOCAD-213ENST00000604254 ANKLE2Q86XL3 938 aa8.86□□□□□ -0.99
FOCAD-213ENST00000604254 NPHP4O75161 1426 aaPredicted RBP8.86□□□□□ -0.99
FOCAD-213ENST00000604254 STAG3Q9UJ98 1225 aa8.85□□□□□ -0.99
FOCAD-213ENST00000604254 NAIPQ13075 1403 aa8.85□□□□□ -0.99
FOCAD-213ENST00000604254 NUP155O75694 1391 aa8.85□□□□□ -0.99
FOCAD-213ENST00000604254 ARHGAP23Q9P227 1491 aa8.84□□□□□ -0.99
FOCAD-213ENST00000604254 HFM1A2PYH4 1435 aa8.84□□□□□ -0.99
FOCAD-213ENST00000604254 TMEM131LA2VDJ0 1609 aa8.83□□□□□ -1
FOCAD-213ENST00000604254 STRCP1A6NGW2 1772 aa8.82□□□□□ -1
FOCAD-213ENST00000604254 FKBP8Q14318 412 aa8.82□□□□□ -1
FOCAD-213ENST00000604254 TMEM2Q9UHN6 1383 aa8.82□□□□□ -1
FOCAD-213ENST00000604254 ALKQ9UM73 1620 aa8.81□□□□□ -1
FOCAD-213ENST00000604254 PIP4K2BP78356 416 aa8.81□□□□□ -1
FOCAD-213ENST00000604254 IDI1Q13907 227 aa8.81□□□□□ -1
FOCAD-213ENST00000604254 SLC52A1Q9NWF4 448 aa8.81□□□□□ -1
FOCAD-213ENST00000604254 EID1Q9Y6B2 187 aa8.81□□□□□ -1
FOCAD-213ENST00000604254 KIF1BO60333 1816 aa8.81□□□□□ -1
FOCAD-213ENST00000604254 TRPM2O94759 1503 aa8.8□□□□□ -1
FOCAD-213ENST00000604254 TXNDC2Q86VQ3 553 aa8.8□□□□□ -1
FOCAD-213ENST00000604254 RGS17Q9UGC6 210 aaPredicted RBP8.8□□□□□ -1
FOCAD-213ENST00000604254 CLTCL1P53675 1640 aa8.8□□□□□ -1
FOCAD-213ENST00000604254 CHGAP10645 457 aaKnown RBP8.78□□□□□ -1
FOCAD-213ENST00000604254 LTKP29376 864 aa8.78□□□□□ -1
FOCAD-213ENST00000604254 TRIM52Q96A61 297 aa8.78□□□□□ -1
FOCAD-213ENST00000604254 RIMS2Q9UQ26 1411 aa8.78□□□□□ -1
FOCAD-213ENST00000604254 PPP1R15AO75807 674 aaPredicted RBP8.77□□□□□ -1.01
FOCAD-213ENST00000604254 ZBTB12Q9Y330 459 aaPredicted RBP8.77□□□□□ -1.01
FOCAD-213ENST00000604254 ZFYVE9O95405 1425 aa8.77□□□□□ -1.01
FOCAD-213ENST00000604254 XIRP1Q702N8 1843 aaKnown RBP8.77□□□□□ -1.01
FOCAD-213ENST00000604254 DIP2AQ14689 1571 aa8.77□□□□□ -1.01
FOCAD-213ENST00000604254 BCANQ96GW7 911 aa8.76□□□□□ -1.01
FOCAD-213ENST00000604254 NWD1Q149M9 1564 aa8.76□□□□□ -1.01
FOCAD-213ENST00000604254 CHD2O14647 1828 aaKnown RBP8.75□□□□□ -1.01
FOCAD-213ENST00000604254 LRRC7Q96NW7 1537 aa8.75□□□□□ -1.01
FOCAD-213ENST00000604254 PLEKHG1Q9ULL1 1385 aa8.74□□□□□ -1.01
FOCAD-213ENST00000604254 HDGFP51858 240 aaKnown RBP8.74□□□□□ -1.01
FOCAD-213ENST00000604254 SETD5Q9C0A6 1442 aa8.73□□□□□ -1.01
FOCAD-213ENST00000604254 NKTRP30414 1462 aaKnown RBP8.73□□□□□ -1.01
FOCAD-213ENST00000604254 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.73□□□□□ -1.01
FOCAD-213ENST00000604254 NEXMIFQ5QGS0 1516 aa8.73□□□□□ -1.01
FOCAD-213ENST00000604254 PPLO60437 1756 aa8.73□□□□□ -1.01
FOCAD-213ENST00000604254 NRXN3Q9Y4C0 1643 aa8.72□□□□□ -1.01
FOCAD-213ENST00000604254 ZNF326Q5BKZ1 582 aaKnown RBP8.72□□□□□ -1.01
FOCAD-213ENST00000604254 SLC26A8Q96RN1 970 aa8.72□□□□□ -1.01
FOCAD-213ENST00000604254 SETBP1Q9Y6X0 1596 aa8.72□□□□□ -1.01
FOCAD-213ENST00000604254 NUTM2DQ5VT03 806 aaPredicted RBP8.71□□□□□ -1.02
FOCAD-213ENST00000604254 ACIN1Q9UKV3 1341 aaKnown RBP8.71□□□□□ -1.02
FOCAD-213ENST00000604254 RAB3GAP2Q9H2M9 1393 aa8.71□□□□□ -1.02
FOCAD-213ENST00000604254 IFT172Q9UG01 1749 aa8.71□□□□□ -1.02
FOCAD-213ENST00000604254 POTEAQ6S8J7 498 aa8.7□□□□□ -1.02
FOCAD-213ENST00000604254 CCDC144AA2RUR9 1427 aa8.7□□□□□ -1.02
FOCAD-213ENST00000604254 ADAMTS13Q76LX8 1427 aa8.7□□□□□ -1.02
FOCAD-213ENST00000604254 XRN1Q8IZH2 1706 aaKnown RBP8.69□□□□□ -1.02
FOCAD-213ENST00000604254 SPDYE4A6NLX3 237 aa8.69□□□□□ -1.02
FOCAD-213ENST00000604254 KCNA6P17658 529 aa8.69□□□□□ -1.02
FOCAD-213ENST00000604254 SETD1AO15047 1707 aaKnown RBP8.68□□□□□ -1.02
FOCAD-213ENST00000604254 MPHOSPH9Q99550 1183 aa8.68□□□□□ -1.02
FOCAD-213ENST00000604254 TMEM94Q12767 1356 aa8.68□□□□□ -1.02
FOCAD-213ENST00000604254 FAM135BQ49AJ0 1406 aa8.68□□□□□ -1.02
FOCAD-213ENST00000604254 PROSER2Q86WR7 435 aaPredicted RBP8.67□□□□□ -1.02
FOCAD-213ENST00000604254 PIK3R4Q99570 1358 aa8.67□□□□□ -1.02
FOCAD-213ENST00000604254 TBX22Q9Y458 520 aa8.67□□□□□ -1.02
FOCAD-213ENST00000604254 MSH6P52701 1360 aa8.66□□□□□ -1.02
FOCAD-213ENST00000604254 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.66□□□□□ -1.02
FOCAD-213ENST00000604254 ROBO1Q9Y6N7 1651 aa8.65□□□□□ -1.02
FOCAD-213ENST00000604254 NALCNQ8IZF0 1738 aa8.65□□□□□ -1.03
FOCAD-213ENST00000604254 RPGRIP1LQ68CZ1 1315 aa8.64□□□□□ -1.03
FOCAD-213ENST00000604254 C14orf37Q86TY3 774 aa8.64□□□□□ -1.03
FOCAD-213ENST00000604254 RBM33Q96EV2 1170 aaKnown RBP8.64□□□□□ -1.03
FOCAD-213ENST00000604254 LAMC1P11047 1609 aa8.64□□□□□ -1.03
FOCAD-213ENST00000604254 SPATA31E1Q6ZUB1 1445 aa8.63□□□□□ -1.03
FOCAD-213ENST00000604254 PTPRUQ92729 1446 aa8.63□□□□□ -1.03
FOCAD-213ENST00000604254 VGFO15240 615 aaPredicted RBP8.63□□□□□ -1.03
FOCAD-213ENST00000604254 UPF1Q92900 1129 aaKnown RBP eCLIP8.63□□□□□ -1.03
FOCAD-213ENST00000604254 PHLPP1O60346 1717 aa8.63□□□□□ -1.03
FOCAD-213ENST00000604254 KNDC1Q76NI1 1749 aa8.63□□□□□ -1.03
FOCAD-213ENST00000604254 NCOA3Q9Y6Q9 1424 aa8.63□□□□□ -1.03
FOCAD-213ENST00000604254 METP08581 1390 aa8.62□□□□□ -1.03
FOCAD-213ENST00000604254 AMOTL2Q9Y2J4 779 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms