RNA–Protein interactions for RNA: ENST00000602655.5

PPFIA3-206, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 3,493 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-206ENST00000602655 TMF1P82094 1093 aa20.11■□□□□ 0.81
PPFIA3-206ENST00000602655 ATP7AQ04656 1500 aa20.1■□□□□ 0.81
PPFIA3-206ENST00000602655 FAM43AQ8N2R8 423 aa20.09■□□□□ 0.81
PPFIA3-206ENST00000602655 ERBINQ96RT1 1412 aa20.08■□□□□ 0.81
PPFIA3-206ENST00000602655 ZNF518AQ6AHZ1 1483 aa20.08■□□□□ 0.8
PPFIA3-206ENST00000602655 CROCC2H7BZ55 1655 aa20.06■□□□□ 0.8
PPFIA3-206ENST00000602655 HSP90AA1P07900 732 aaKnown RBP20.05■□□□□ 0.8
PPFIA3-206ENST00000602655 DDRGK1Q96HY6 314 aa20.04■□□□□ 0.8
PPFIA3-206ENST00000602655 RIMBP3CA6NJZ7 1639 aa20.04■□□□□ 0.8
PPFIA3-206ENST00000602655 RIMBP3BA6NNM3 1639 aa20.04■□□□□ 0.8
PPFIA3-206ENST00000602655 RIMBP3Q9UFD9 1639 aa20.04■□□□□ 0.8
PPFIA3-206ENST00000602655 ZBED9Q6R2W3 1325 aa20.03■□□□□ 0.8
PPFIA3-206ENST00000602655 DISP3Q9P2K9 1392 aa20.03■□□□□ 0.8
PPFIA3-206ENST00000602655 KNSTRNQ9Y448 316 aa20.03■□□□□ 0.8
PPFIA3-206ENST00000602655 MINK1Q8N4C8 1332 aaPredicted RBP20.03■□□□□ 0.8
PPFIA3-206ENST00000602655 POGKQ9P215 609 aa20.03■□□□□ 0.8
PPFIA3-206ENST00000602655 POGZQ7Z3K3 1410 aa20.03■□□□□ 0.8
PPFIA3-206ENST00000602655 ZFYVE16Q7Z3T8 1539 aa20.03■□□□□ 0.8
PPFIA3-206ENST00000602655 CNTLNQ9NXG0 1405 aa20.02■□□□□ 0.8
PPFIA3-206ENST00000602655 TCERG1O14776 1098 aaKnown RBP20.01■□□□□ 0.79
PPFIA3-206ENST00000602655 SRPK2P78362 688 aaKnown RBP20■□□□□ 0.79
PPFIA3-206ENST00000602655 PRAG1Q86YV5 1406 aa20■□□□□ 0.79
PPFIA3-206ENST00000602655 FRAT2O75474 233 aaPredicted RBP19.99■□□□□ 0.79
PPFIA3-206ENST00000602655 CABP2Q9NPB3 220 aa19.99■□□□□ 0.79
PPFIA3-206ENST00000602655 NOS1P29475 1434 aa19.99■□□□□ 0.79
PPFIA3-206ENST00000602655 RTEL1-TNFRSF6BF6WH68 1400 aa19.99■□□□□ 0.79
PPFIA3-206ENST00000602655 SLC12A5Q9H2X9 1139 aa19.99■□□□□ 0.79
PPFIA3-206ENST00000602655 PNNQ9H307 717 aaKnown RBP19.99■□□□□ 0.79
PPFIA3-206ENST00000602655 TESK2Q96S53 571 aa19.98■□□□□ 0.79
PPFIA3-206ENST00000602655 ATP10AO60312 1499 aa19.97■□□□□ 0.79
PPFIA3-206ENST00000602655 RBM33Q96EV2 1170 aaKnown RBP19.96■□□□□ 0.79
PPFIA3-206ENST00000602655 SPATA31E1Q6ZUB1 1445 aa19.95■□□□□ 0.78
PPFIA3-206ENST00000602655 ABCA9Q8IUA7 1624 aa19.95■□□□□ 0.78
PPFIA3-206ENST00000602655 NEUROD2Q15784 382 aa19.95■□□□□ 0.78
PPFIA3-206ENST00000602655 NUDCQ9Y266 331 aa19.95■□□□□ 0.78
PPFIA3-206ENST00000602655 NPATQ14207 1427 aa19.95■□□□□ 0.78
PPFIA3-206ENST00000602655 SKAP1Q86WV1 359 aa19.95■□□□□ 0.78
PPFIA3-206ENST00000602655 BACH2Q9BYV9 841 aa19.95■□□□□ 0.78
PPFIA3-206ENST00000602655 SLC24A1O60721 1099 aa19.95■□□□□ 0.78
PPFIA3-206ENST00000602655 SOX12O15370 315 aa19.94■□□□□ 0.78
PPFIA3-206ENST00000602655 EXOC6Q8TAG9 804 aa19.94■□□□□ 0.78
PPFIA3-206ENST00000602655 WAPLQ7Z5K2 1190 aa19.93■□□□□ 0.78
PPFIA3-206ENST00000602655 SLC26A8Q96RN1 970 aa19.92■□□□□ 0.78
PPFIA3-206ENST00000602655 VGFO15240 615 aaPredicted RBP19.92■□□□□ 0.78
PPFIA3-206ENST00000602655 CCDC146Q8IYE0 955 aa19.91■□□□□ 0.78
PPFIA3-206ENST00000602655 COL17A1Q9UMD9 1497 aaPredicted RBP19.91■□□□□ 0.78
PPFIA3-206ENST00000602655 RRAGDQ9NQL2 400 aaPredicted RBP19.9■□□□□ 0.78
PPFIA3-206ENST00000602655 MAST1Q9Y2H9 1570 aa19.9■□□□□ 0.78
PPFIA3-206ENST00000602655 PRDM15P57071 1507 aaPredicted RBP19.89■□□□□ 0.77
PPFIA3-206ENST00000602655 PRAM1Q96QH2 718 aa19.89■□□□□ 0.77
PPFIA3-206ENST00000602655 TXNDC2Q86VQ3 553 aa19.88■□□□□ 0.77
PPFIA3-206ENST00000602655 CENPJQ9HC77 1338 aaPredicted RBP19.87■□□□□ 0.77
PPFIA3-206ENST00000602655 FBLN1P23142 703 aa19.87■□□□□ 0.77
PPFIA3-206ENST00000602655 RALGAPBQ86X10 1494 aa19.87■□□□□ 0.77
PPFIA3-206ENST00000602655 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.86■□□□□ 0.77
PPFIA3-206ENST00000602655 KTN1Q86UP2 1357 aaKnown RBP19.85■□□□□ 0.77
PPFIA3-206ENST00000602655 KIDINS220Q9ULH0 1771 aa19.84■□□□□ 0.77
PPFIA3-206ENST00000602655 RRP9O43818 475 aaKnown RBP19.84■□□□□ 0.77
PPFIA3-206ENST00000602655 PLXNC1O60486 1568 aa19.83■□□□□ 0.77
PPFIA3-206ENST00000602655 BCORL1Q5H9F3 1711 aa19.82■□□□□ 0.76
PPFIA3-206ENST00000602655 NCKAP5LQ9HCH0 1330 aa19.82■□□□□ 0.76
PPFIA3-206ENST00000602655 WDR43Q15061 677 aaKnown RBP eCLIP19.81■□□□□ 0.76
PPFIA3-206ENST00000602655 UHRF1BP1Q6BDS2 1440 aa19.81■□□□□ 0.76
PPFIA3-206ENST00000602655 KDM5DQ9BY66 1539 aa19.8■□□□□ 0.76
PPFIA3-206ENST00000602655 SLC52A1Q9NWF4 448 aa19.8■□□□□ 0.76
PPFIA3-206ENST00000602655 E9PCH4 1651 aa19.8■□□□□ 0.76
PPFIA3-206ENST00000602655 GGNBP2Q9H3C7 697 aa19.8■□□□□ 0.76
PPFIA3-206ENST00000602655 NEO1Q92859 1461 aa19.8■□□□□ 0.76
PPFIA3-206ENST00000602655 MLH3Q9UHC1 1453 aa19.8■□□□□ 0.76
PPFIA3-206ENST00000602655 CDCA8Q53HL2 280 aa19.79■□□□□ 0.76
PPFIA3-206ENST00000602655 C14orf93Q9H972 538 aaKnown RBP19.78■□□□□ 0.76
PPFIA3-206ENST00000602655 MORC1Q86VD1 984 aa19.78■□□□□ 0.76
PPFIA3-206ENST00000602655 RRP7AQ9Y3A4 280 aaKnown RBP19.78■□□□□ 0.76
PPFIA3-206ENST00000602655 PER1O15534 1290 aaPredicted RBP19.78■□□□□ 0.76
PPFIA3-206ENST00000602655 CDCA7LQ96GN5 454 aa19.78■□□□□ 0.76
PPFIA3-206ENST00000602655 PNISRQ8TF01 805 aaKnown RBP19.77■□□□□ 0.76
PPFIA3-206ENST00000602655 GZF1Q9H116 711 aaPredicted RBP19.77■□□□□ 0.76
PPFIA3-206ENST00000602655 MYBBP1AQ9BQG0 1328 aaKnown RBP19.77■□□□□ 0.76
PPFIA3-206ENST00000602655 UNC13BO14795 1591 aa19.77■□□□□ 0.76
PPFIA3-206ENST00000602655 MS4A1P11836 297 aa19.77■□□□□ 0.76
PPFIA3-206ENST00000602655 RBM10P98175 930 aaKnown RBP19.77■□□□□ 0.76
PPFIA3-206ENST00000602655 IQGAP3Q86VI3 1631 aa19.77■□□□□ 0.76
PPFIA3-206ENST00000602655 CLTCL1P53675 1640 aa19.76■□□□□ 0.75
PPFIA3-206ENST00000602655 NLRP13Q86W25 1043 aa19.76■□□□□ 0.75
PPFIA3-206ENST00000602655 CARD14Q9BXL6 1004 aa19.76■□□□□ 0.75
PPFIA3-206ENST00000602655 ADAMTS8Q9UP79 889 aa19.76■□□□□ 0.75
PPFIA3-206ENST00000602655 SLKQ9H2G2 1235 aaPredicted RBP19.75■□□□□ 0.75
PPFIA3-206ENST00000602655 L1TD1Q5T7N2 865 aaKnown RBP19.75■□□□□ 0.75
PPFIA3-206ENST00000602655 HECW2Q9P2P5 1572 aa19.75■□□□□ 0.75
PPFIA3-206ENST00000602655 INO80Q9ULG1 1556 aaPredicted RBP19.75■□□□□ 0.75
PPFIA3-206ENST00000602655 RALBP1Q15311 655 aa19.74■□□□□ 0.75
PPFIA3-206ENST00000602655 ABCA6Q8N139 1617 aa19.74■□□□□ 0.75
PPFIA3-206ENST00000602655 ARAP3Q8WWN8 1544 aa19.74■□□□□ 0.75
PPFIA3-206ENST00000602655 PTPRTO14522 1441 aa19.73■□□□□ 0.75
PPFIA3-206ENST00000602655 ZMYM3Q14202 1370 aa19.73■□□□□ 0.75
PPFIA3-206ENST00000602655 CEP152O94986 1710 aa19.73■□□□□ 0.75
PPFIA3-206ENST00000602655 EIF3AQ14152 1382 aaKnown RBP19.73■□□□□ 0.75
PPFIA3-206ENST00000602655 PLIN1O60240 522 aa19.73■□□□□ 0.75
PPFIA3-206ENST00000602655 RGS3P49796 1198 aa19.73■□□□□ 0.75
PPFIA3-206ENST00000602655 U2SURPO15042 1029 aaKnown RBP19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms