RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 BCANQ96GW7 911 aa41.88■■■■■ 4.29
SSBP4-206ENST00000599699 TRPM2O94759 1503 aa41.87■■■■■ 4.29
SSBP4-206ENST00000599699 FOXD1Q16676 465 aa41.87■■■■■ 4.29
SSBP4-206ENST00000599699 ABCF1Q8NE71 845 aaKnown RBP eCLIP41.84■■■■■ 4.29
SSBP4-206ENST00000599699 ZFYVE9O95405 1425 aa41.84■■■■■ 4.29
SSBP4-206ENST00000599699 SENP3Q9H4L4 574 aaPredicted RBP41.83■■■■■ 4.29
SSBP4-206ENST00000599699 ZNF326Q5BKZ1 582 aaKnown RBP41.82■■■■■ 4.29
SSBP4-206ENST00000599699 CLTCL1P53675 1640 aa41.8■■■■■ 4.28
SSBP4-206ENST00000599699 NUTM2DQ5VT03 806 aaPredicted RBP41.8■■■■■ 4.28
SSBP4-206ENST00000599699 SLC26A8Q96RN1 970 aa41.78■■■■■ 4.28
SSBP4-206ENST00000599699 CPS1P31327 1500 aa41.75■■■■■ 4.27
SSBP4-206ENST00000599699 PLEKHG1Q9ULL1 1385 aa41.74■■■■■ 4.27
SSBP4-206ENST00000599699 IQSEC2Q5JU85 1478 aa41.72■■■■■ 4.27
SSBP4-206ENST00000599699 HRCP23327 699 aa41.66■■■■■ 4.26
SSBP4-206ENST00000599699 KIF1BO60333 1816 aa41.66■■■■■ 4.26
SSBP4-206ENST00000599699 CCDC144AA2RUR9 1427 aa41.64■■■■■ 4.26
SSBP4-206ENST00000599699 STRCP1A6NGW2 1772 aa41.6■■■■■ 4.25
SSBP4-206ENST00000599699 KCNA6P17658 529 aa41.57■■■■■ 4.25
SSBP4-206ENST00000599699 UBAP1LF5GYI3 381 aa41.56■■■■■ 4.24
SSBP4-206ENST00000599699 TBX22Q9Y458 520 aa41.56■■■■■ 4.24
SSBP4-206ENST00000599699 LRRC7Q96NW7 1537 aa41.54■■■■■ 4.24
SSBP4-206ENST00000599699 NEXMIFQ5QGS0 1516 aa41.53■■■■■ 4.24
SSBP4-206ENST00000599699 ADAMTS13Q76LX8 1427 aa41.51■■■■■ 4.24
SSBP4-206ENST00000599699 RPGRIP1LQ68CZ1 1315 aa41.5■■■■■ 4.23
SSBP4-206ENST00000599699 RGL3Q3MIN7 710 aa41.48■■■■■ 4.23
SSBP4-206ENST00000599699 VGFO15240 615 aaPredicted RBP41.47■■■■■ 4.23
SSBP4-206ENST00000599699 DIP2AQ14689 1571 aa41.46■■■■■ 4.23
SSBP4-206ENST00000599699 PROSER2Q86WR7 435 aaPredicted RBP41.45■■■■■ 4.23
SSBP4-206ENST00000599699 TOM1O60784 492 aa41.42■■■■■ 4.22
SSBP4-206ENST00000599699 SETBP1Q9Y6X0 1596 aa41.41■■■■■ 4.22
SSBP4-206ENST00000599699 SPATA31E1Q6ZUB1 1445 aa41.4■■■■■ 4.22
SSBP4-206ENST00000599699 NWD1Q149M9 1564 aa41.39■■■■■ 4.22
SSBP4-206ENST00000599699 NKTRP30414 1462 aaKnown RBP41.38■■■■■ 4.21
SSBP4-206ENST00000599699 TMEM94Q12767 1356 aa41.37■■■■■ 4.21
SSBP4-206ENST00000599699 PIK3R4Q99570 1358 aa41.37■■■■■ 4.21
SSBP4-206ENST00000599699 RBM33Q96EV2 1170 aaKnown RBP41.37■■■■■ 4.21
SSBP4-206ENST00000599699 SCAF1Q9H7N4 1312 aaKnown RBP41.37■■■■■ 4.21
SSBP4-206ENST00000599699 ANKRD30BQ9BXX2 1392 aa41.37■■■■■ 4.21
SSBP4-206ENST00000599699 NRXN3Q9Y4C0 1643 aa41.36■■■■■ 4.21
SSBP4-206ENST00000599699 CHD2O14647 1828 aaKnown RBP41.34■■■■■ 4.21
SSBP4-206ENST00000599699 PIP4K2BP78356 416 aa41.34■■■■■ 4.21
SSBP4-206ENST00000599699 TRIM26Q12899 539 aaPredicted RBP41.32■■■■■ 4.21
SSBP4-206ENST00000599699 PPLO60437 1756 aa41.32■■■■■ 4.2
SSBP4-206ENST00000599699 AMOTL2Q9Y2J4 779 aa41.31■■■■■ 4.2
SSBP4-206ENST00000599699 METP08581 1390 aa41.28■■■■■ 4.2
SSBP4-206ENST00000599699 PTPRUQ92729 1446 aa41.26■■■■■ 4.19
SSBP4-206ENST00000599699 XIRP1Q702N8 1843 aaKnown RBP41.25■■■■■ 4.19
SSBP4-206ENST00000599699 ADGRF5Q8IZF2 1346 aa41.24■■■■■ 4.19
SSBP4-206ENST00000599699 C14orf37Q86TY3 774 aa41.22■■■■■ 4.19
SSBP4-206ENST00000599699 MSH6P52701 1360 aa41.18■■■■■ 4.18
SSBP4-206ENST00000599699 ALKQ9UM73 1620 aa41.18■■■■■ 4.18
SSBP4-206ENST00000599699 IFT172Q9UG01 1749 aa41.15■■■■■ 4.18
SSBP4-206ENST00000599699 NCOA3Q9Y6Q9 1424 aa41.11■■■■■ 4.17
SSBP4-206ENST00000599699 XRN1Q8IZH2 1706 aaKnown RBP41.11■■■■■ 4.17
SSBP4-206ENST00000599699 SETD1AO15047 1707 aaKnown RBP41.07■■■■■ 4.17
SSBP4-206ENST00000599699 PIK3C2GO75747 1445 aa41.07■■■■■ 4.16
SSBP4-206ENST00000599699 MYOM2P54296 1465 aa41.04■■■■■ 4.16
SSBP4-206ENST00000599699 DCAF11Q8TEB1 546 aa41.04■■■■■ 4.16
SSBP4-206ENST00000599699 KDM2AQ9Y2K7 1162 aa41.04■■■■■ 4.16
SSBP4-206ENST00000599699 C19orf44Q9H6X5 657 aa41.03■■■■■ 4.16
SSBP4-206ENST00000599699 HSPA1LP34931 641 aa41.02■■■■■ 4.16
SSBP4-206ENST00000599699 ATF3P18847 181 aa41■■■■■ 4.15
SSBP4-206ENST00000599699 TMEM132EQ6IEE7 984 aa40.98■■■■■ 4.15
SSBP4-206ENST00000599699 NRXN1Q9ULB1 1477 aa40.97■■■■■ 4.15
SSBP4-206ENST00000599699 SLAIN2Q9P270 581 aa40.97■■■■■ 4.15
SSBP4-206ENST00000599699 STK26Q9P289 416 aa40.97■■■■■ 4.15
SSBP4-206ENST00000599699 CADPS2Q86UW7 1296 aa40.96■■■■■ 4.15
SSBP4-206ENST00000599699 C14orf93Q9H972 538 aaKnown RBP40.96■■■■■ 4.15
SSBP4-206ENST00000599699 PTCH1Q13635 1447 aa40.95■■■■■ 4.15
SSBP4-206ENST00000599699 CFAP70Q5T0N1 1121 aa40.95■■■■■ 4.15
SSBP4-206ENST00000599699 ROBO2Q9HCK4 1378 aa40.95■■■■■ 4.15
SSBP4-206ENST00000599699 STAC3Q96MF2 364 aa40.92■■■■■ 4.14
SSBP4-206ENST00000599699 SIPA1L2Q9P2F8 1722 aaPredicted RBP40.92■■■■■ 4.14
SSBP4-206ENST00000599699 FAM135BQ49AJ0 1406 aa40.92■■■■■ 4.14
SSBP4-206ENST00000599699 DHX57Q6P158 1386 aaKnown RBP40.91■■■■■ 4.14
SSBP4-206ENST00000599699 LRPPRCP42704 1394 aaKnown RBP40.89■■■■■ 4.14
SSBP4-206ENST00000599699 PRAG1Q86YV5 1406 aa40.88■■■■■ 4.13
SSBP4-206ENST00000599699 ADGRL3Q9HAR2 1447 aa40.87■■■■■ 4.13
SSBP4-206ENST00000599699 ASXL1Q8IXJ9 1541 aa40.87■■■■■ 4.13
SSBP4-206ENST00000599699 LAMC1P11047 1609 aa40.85■■■■■ 4.13
SSBP4-206ENST00000599699 DCCP43146 1447 aa40.84■■■■■ 4.13
SSBP4-206ENST00000599699 SIN3AQ96ST3 1273 aa40.84■■■■■ 4.13
SSBP4-206ENST00000599699 YTHDC2Q9H6S0 1430 aaKnown RBP40.84■■■■■ 4.13
SSBP4-206ENST00000599699 ABCC11Q96J66 1382 aa40.83■■■■■ 4.13
SSBP4-206ENST00000599699 ROBO1Q9Y6N7 1651 aa40.82■■■■■ 4.13
SSBP4-206ENST00000599699 NEUROD1Q13562 356 aa40.82■■■■■ 4.13
SSBP4-206ENST00000599699 TECPR2O15040 1411 aa40.8■■■■■ 4.12
SSBP4-206ENST00000599699 WAPLQ7Z5K2 1190 aa40.78■■■■■ 4.12
SSBP4-206ENST00000599699 NALCNQ8IZF0 1738 aa40.78■■■■■ 4.12
SSBP4-206ENST00000599699 KNDC1Q76NI1 1749 aa40.71■■■■■ 4.11
SSBP4-206ENST00000599699 MST1RQ04912 1400 aa40.7■■■■■ 4.11
SSBP4-206ENST00000599699 PCGF6Q9BYE7 350 aa40.7■■■■■ 4.11
SSBP4-206ENST00000599699 L3MBTL2Q969R5 705 aa40.69■■■■■ 4.1
SSBP4-206ENST00000599699 PLEKHH1Q9ULM0 1364 aa40.69■■■■■ 4.1
SSBP4-206ENST00000599699 SIRT1Q96EB6 747 aa40.68■■■■■ 4.1
SSBP4-206ENST00000599699 BRINP3Q76B58 766 aa40.66■■■■■ 4.1
SSBP4-206ENST00000599699 ADGRB1O14514 1584 aa40.65■■■■■ 4.1
SSBP4-206ENST00000599699 TRAK1Q9UPV9 953 aa40.65■■■■■ 4.1
SSBP4-206ENST00000599699 PRAM1Q96QH2 718 aa40.64■■■■■ 4.1
SSBP4-206ENST00000599699 POGKQ9P215 609 aa40.63■■■■■ 4.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms