RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 PP632Q6XCG6 107 aa10.07□□□□□ -0.8
SSBP4-206ENST00000599699 MT1LQ93083 61 aa10.05□□□□□ -0.8
SSBP4-206ENST00000599699 A6NED7 52 aa10.04□□□□□ -0.8
SSBP4-206ENST00000599699 DSTQ03001 7570 aaKnown RBP10.01□□□□□ -0.81
SSBP4-206ENST00000599699 RPS28P62857 69 aaKnown RBP9.98□□□□□ -0.81
SSBP4-206ENST00000599699 KRTAP25-1Q3LHN0 102 aa9.98□□□□□ -0.81
SSBP4-206ENST00000599699 MT1MQ8N339 61 aa9.95□□□□□ -0.82
SSBP4-206ENST00000599699 KRTAP12-3P60328 96 aa9.91□□□□□ -0.82
SSBP4-206ENST00000599699 GPR98Q8WXG9 6306 aa9.75□□□□□ -0.85
SSBP4-206ENST00000599699 KRTAP4-3Q9BYR4 195 aa9.72□□□□□ -0.85
SSBP4-206ENST00000599699 CDC42SE1Q9NRR8 79 aa9.67□□□□□ -0.86
SSBP4-206ENST00000599699 KRTAP4-9Q9BYQ8 210 aa9.61□□□□□ -0.87
SSBP4-206ENST00000599699 KRTAP4-7Q9BYR0 210 aa9.59□□□□□ -0.87
SSBP4-206ENST00000599699 KRTAP23-1A1A580 65 aa9.57□□□□□ -0.88
SSBP4-206ENST00000599699 ROMO1P60602 79 aa9.52□□□□□ -0.89
SSBP4-206ENST00000599699 LCE4AQ5TA78 99 aa9.46□□□□□ -0.9
SSBP4-206ENST00000599699 LCE1DQ5T752 114 aa9.4□□□□□ -0.9
SSBP4-206ENST00000599699 MT4P47944 62 aa9.37□□□□□ -0.91
SSBP4-206ENST00000599699 KRTAP15-1Q3LI76 137 aa9.34□□□□□ -0.91
SSBP4-206ENST00000599699 KRTAP19-4Q3LI73 84 aa9.31□□□□□ -0.92
SSBP4-206ENST00000599699 KRTAP5-4Q6L8H1 288 aa9.29□□□□□ -0.92
SSBP4-206ENST00000599699 HMCN1Q96RW7 5635 aa9.23□□□□□ -0.93
SSBP4-206ENST00000599699 LCE3CQ5T5A8 94 aa9.14□□□□□ -0.95
SSBP4-206ENST00000599699 KRTAP4-6Q9BYQ5 205 aa9.09□□□□□ -0.95
SSBP4-206ENST00000599699 LOC100996750A0A140TA64 210 aa9.07□□□□□ -0.96
SSBP4-206ENST00000599699 KRTAP5-5Q701N2 237 aaPredicted RBP9.06□□□□□ -0.96
SSBP4-206ENST00000599699 AHNAK2Q8IVF2 5795 aa8.93□□□□□ -0.98
SSBP4-206ENST00000599699 BRK1Q8WUW1 75 aa8.87□□□□□ -0.99
SSBP4-206ENST00000599699 KRTAP12-4P60329 112 aa8.84□□□□□ -0.99
SSBP4-206ENST00000599699 KRTAP20-2Q3LI61 65 aa8.79□□□□□ -1
SSBP4-206ENST00000599699 SPRR5A0A1B0GTR4 108 aa8.76□□□□□ -1.01
SSBP4-206ENST00000599699 KRTAP5-10Q6L8G5 202 aa8.75□□□□□ -1.01
SSBP4-206ENST00000599699 SYNE1Q8NF91 8797 aaKnown RBP8.66□□□□□ -1.02
SSBP4-206ENST00000599699 KRTAP9-6A8MVA2 160 aa8.58□□□□□ -1.04
SSBP4-206ENST00000599699 MT1AP04731 61 aa8.55□□□□□ -1.04
SSBP4-206ENST00000599699 KRTAP6-1Q3LI64 71 aa8.49□□□□□ -1.05
SSBP4-206ENST00000599699 KRTAP5-3Q6L8H2 238 aa8.49□□□□□ -1.05
SSBP4-206ENST00000599699 KRTAP5-7Q6L8G8 165 aa8.47□□□□□ -1.05
SSBP4-206ENST00000599699 PMAIP1Q13794 54 aa8.35□□□□□ -1.07
SSBP4-206ENST00000599699 KRTAP9-4Q9BYQ2 154 aa8.24□□□□□ -1.09
SSBP4-206ENST00000599699 KRTAP5-2Q701N4 177 aa8.18□□□□□ -1.1
SSBP4-206ENST00000599699 PRO0628Q9UI54 55 aa8.09□□□□□ -1.11
SSBP4-206ENST00000599699 KRTAP6-2Q3LI66 62 aa8.08□□□□□ -1.12
SSBP4-206ENST00000599699 PRAC1Q96KF2 57 aa7.99□□□□□ -1.13
SSBP4-206ENST00000599699 KRTAP4-11Q9BYQ6 195 aa7.97□□□□□ -1.13
SSBP4-206ENST00000599699 MT3P25713 68 aa7.84□□□□□ -1.15
SSBP4-206ENST00000599699 KRTAP5-8O75690 187 aa7.67□□□□□ -1.18
SSBP4-206ENST00000599699 KTN1-AS1Q86SY8 53 aa7.64□□□□□ -1.19
SSBP4-206ENST00000599699 OBSCNQ5VST9 7968 aa7.61□□□□□ -1.19
SSBP4-206ENST00000599699 AHNAKQ09666 5890 aaKnown RBP7.5□□□□□ -1.21
SSBP4-206ENST00000599699 MUC5ACP98088 5654 aa7.47□□□□□ -1.21
SSBP4-206ENST00000599699 MUC5BQ9HC84 5762 aaPredicted RBP7.39□□□□□ -1.23
SSBP4-206ENST00000599699 SVIPQ8NHG7 77 aa7.34□□□□□ -1.23
SSBP4-206ENST00000599699 KRTAP5-1Q6L8H4 278 aa7.29□□□□□ -1.24
SSBP4-206ENST00000599699 KRTAP9-9Q9BYP9 154 aa7.28□□□□□ -1.24
SSBP4-206ENST00000599699 LCE1EQ5T753 118 aa7.09□□□□□ -1.27
SSBP4-206ENST00000599699 LUZP6Q538Z0 58 aa6.76□□□□□ -1.33
SSBP4-206ENST00000599699 LCE1BQ5T7P3 118 aa6.74□□□□□ -1.33
SSBP4-206ENST00000599699 KRTAP4-2Q9BYR5 136 aa6.67□□□□□ -1.34
SSBP4-206ENST00000599699 LCE3DQ9BYE3 92 aa6.65□□□□□ -1.34
SSBP4-206ENST00000599699 LCE1CQ5T751 118 aa6.58□□□□□ -1.36
SSBP4-206ENST00000599699 LCE3EQ5T5B0 92 aa6.3□□□□□ -1.4
SSBP4-206ENST00000599699 KRTAP4-12Q9BQ66 201 aa6.01□□□□□ -1.45
SSBP4-206ENST00000599699 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.99□□□□□ -1.45
SSBP4-206ENST00000599699 KRTAP5-11Q6L8G4 156 aa5.93□□□□□ -1.46
SSBP4-206ENST00000599699 NDUFAF8A1L188 74 aa5.78□□□□□ -1.48
SSBP4-206ENST00000599699 LCE1FQ5T754 118 aa5.71□□□□□ -1.5
SSBP4-206ENST00000599699 KRTAP21-2Q3LI59 83 aa5.56□□□□□ -1.52
SSBP4-206ENST00000599699 PHGR1C9JFL3 82 aa5.12□□□□□ -1.59
SSBP4-206ENST00000599699 KRTAP4-4Q9BYR3 166 aa5.12□□□□□ -1.59
SSBP4-206ENST00000599699 PRM1P04553 51 aa4.88□□□□□ -1.63
SSBP4-206ENST00000599699 A0A0A0MQY5 61 aa4.83□□□□□ -1.64
SSBP4-206ENST00000599699 INE1O15225 51 aa4.7□□□□□ -1.66
SSBP4-206ENST00000599699 MUC19Q7Z5P9 8384 aa4.68□□□□□ -1.66
SSBP4-206ENST00000599699 KRTAP21-1Q3LI58 79 aa3.87□□□□□ -1.79
SSBP4-206ENST00000599699 H3BS24 57 aa3.73□□□□□ -1.81
SSBP4-206ENST00000599699 MUC16Q8WXI7 14507 aa3.34□□□□□ -1.87
Retrieved 77 of 20,778 RNA–protein pairs in 13.1 ms