RNA–Protein interactions for RNA: ENST00000596638.1

SIN3B-208, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 5

Gene SIN3B, Length 1,104 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-208ENST00000596638 ABCC3O15438 1527 aa11.72□□□□□ -0.53
SIN3B-208ENST00000596638 KIF15Q9NS87 1388 aa11.71□□□□□ -0.53
SIN3B-208ENST00000596638 NEURL4Q96JN8 1562 aa11.71□□□□□ -0.54
SIN3B-208ENST00000596638 ADGRL2O95490 1459 aa11.7□□□□□ -0.54
SIN3B-208ENST00000596638 IDI1Q13907 227 aa11.69□□□□□ -0.54
SIN3B-208ENST00000596638 ERVK-7P63135 1459 aa11.69□□□□□ -0.54
SIN3B-208ENST00000596638 IQSEC2Q5JU85 1478 aa11.69□□□□□ -0.54
SIN3B-208ENST00000596638 SHANK2Q9UPX8 1470 aa11.69□□□□□ -0.54
SIN3B-208ENST00000596638 SMG6Q86US8 1419 aaKnown RBP11.69□□□□□ -0.54
SIN3B-208ENST00000596638 RNF17Q9BXT8 1623 aaKnown RBP11.68□□□□□ -0.54
SIN3B-208ENST00000596638 UGGT1Q9NYU2 1555 aa11.68□□□□□ -0.54
SIN3B-208ENST00000596638 C11orf95C9JLR9 678 aaPredicted RBP11.68□□□□□ -0.54
SIN3B-208ENST00000596638 TXNDC2Q86VQ3 553 aa11.68□□□□□ -0.54
SIN3B-208ENST00000596638 DUOX2Q9NRD8 1548 aa11.68□□□□□ -0.54
SIN3B-208ENST00000596638 MED14O60244 1454 aa11.68□□□□□ -0.54
SIN3B-208ENST00000596638 NLRP1Q9C000 1473 aa11.68□□□□□ -0.54
SIN3B-208ENST00000596638 CFAP65Q6ZU64 1925 aaKnown RBP11.68□□□□□ -0.54
SIN3B-208ENST00000596638 KIF7Q2M1P5 1343 aa11.67□□□□□ -0.54
SIN3B-208ENST00000596638 RNF123Q5XPI4 1314 aa11.67□□□□□ -0.54
SIN3B-208ENST00000596638 FAM135AQ9P2D6 1515 aa11.67□□□□□ -0.54
SIN3B-208ENST00000596638 PIP4K2BP78356 416 aa11.67□□□□□ -0.54
SIN3B-208ENST00000596638 NBPF8Q3BBV2 869 aa11.67□□□□□ -0.54
SIN3B-208ENST00000596638 NPHP4O75161 1426 aaPredicted RBP11.67□□□□□ -0.54
SIN3B-208ENST00000596638 HSPA1LP34931 641 aa11.66□□□□□ -0.54
SIN3B-208ENST00000596638 MRS2Q9HD23 443 aa11.66□□□□□ -0.54
SIN3B-208ENST00000596638 ARHGAP31Q2M1Z3 1444 aa11.66□□□□□ -0.54
SIN3B-208ENST00000596638 VWDEQ8N2E2 1590 aa11.65□□□□□ -0.54
SIN3B-208ENST00000596638 ROCK2O75116 1388 aaKnown RBP11.65□□□□□ -0.55
SIN3B-208ENST00000596638 CCDC184Q52MB2 194 aa11.64□□□□□ -0.55
SIN3B-208ENST00000596638 BCL11AQ9H165 835 aa11.64□□□□□ -0.55
SIN3B-208ENST00000596638 KTN1Q86UP2 1357 aaKnown RBP11.64□□□□□ -0.55
SIN3B-208ENST00000596638 ANKRD30AQ9BXX3 1397 aa11.64□□□□□ -0.55
SIN3B-208ENST00000596638 EIF2AK4Q9P2K8 1649 aaKnown RBP11.64□□□□□ -0.55
SIN3B-208ENST00000596638 ERBINQ96RT1 1412 aa11.63□□□□□ -0.55
SIN3B-208ENST00000596638 CEP152O94986 1710 aa11.63□□□□□ -0.55
SIN3B-208ENST00000596638 CROCC2H7BZ55 1655 aa11.62□□□□□ -0.55
SIN3B-208ENST00000596638 ALKQ9UM73 1620 aa11.62□□□□□ -0.55
SIN3B-208ENST00000596638 TOM1O60784 492 aa11.62□□□□□ -0.55
SIN3B-208ENST00000596638 SLC4A1APQ9BWU0 796 aaKnown RBP11.62□□□□□ -0.55
SIN3B-208ENST00000596638 ARHGAP23Q9P227 1491 aa11.61□□□□□ -0.55
SIN3B-208ENST00000596638 STRCP1A6NGW2 1772 aa11.61□□□□□ -0.55
SIN3B-208ENST00000596638 DEPDC5O75140 1603 aa11.6□□□□□ -0.55
SIN3B-208ENST00000596638 RALGAPBQ86X10 1494 aa11.6□□□□□ -0.55
SIN3B-208ENST00000596638 TMEM2Q9UHN6 1383 aa11.6□□□□□ -0.55
SIN3B-208ENST00000596638 ERICH6Q7L0X2 663 aa11.6□□□□□ -0.55
SIN3B-208ENST00000596638 RBM33Q96EV2 1170 aaKnown RBP11.6□□□□□ -0.55
SIN3B-208ENST00000596638 SLC26A8Q96RN1 970 aa11.6□□□□□ -0.55
SIN3B-208ENST00000596638 NUDCQ9Y266 331 aa11.6□□□□□ -0.55
SIN3B-208ENST00000596638 PRDM15P57071 1507 aaPredicted RBP11.6□□□□□ -0.55
SIN3B-208ENST00000596638 LRRC7Q96NW7 1537 aa11.6□□□□□ -0.55
SIN3B-208ENST00000596638 NOS1P29475 1434 aa11.6□□□□□ -0.55
SIN3B-208ENST00000596638 IRX6P78412 446 aaPredicted RBP11.59□□□□□ -0.55
SIN3B-208ENST00000596638 FAM9BQ8IZU0 186 aa11.59□□□□□ -0.55
SIN3B-208ENST00000596638 CPS1P31327 1500 aa11.59□□□□□ -0.55
SIN3B-208ENST00000596638 ZC3H13Q5T200 1668 aaKnown RBP11.59□□□□□ -0.55
SIN3B-208ENST00000596638 UBR1Q8IWV7 1749 aa11.58□□□□□ -0.56
SIN3B-208ENST00000596638 KANK1Q14678 1352 aa11.58□□□□□ -0.56
SIN3B-208ENST00000596638 STAG3Q9UJ98 1225 aa11.58□□□□□ -0.56
SIN3B-208ENST00000596638 EID1Q9Y6B2 187 aa11.58□□□□□ -0.56
SIN3B-208ENST00000596638 SLIT1O75093 1534 aa11.58□□□□□ -0.56
SIN3B-208ENST00000596638 ANKRD50Q9ULJ7 1429 aa11.58□□□□□ -0.56
SIN3B-208ENST00000596638 SCAF11Q99590 1463 aaKnown RBP11.57□□□□□ -0.56
SIN3B-208ENST00000596638 USP47Q96K76 1375 aa11.57□□□□□ -0.56
SIN3B-208ENST00000596638 LMTK2Q8IWU2 1503 aa11.57□□□□□ -0.56
SIN3B-208ENST00000596638 SLC52A1Q9NWF4 448 aa11.56□□□□□ -0.56
SIN3B-208ENST00000596638 IQGAP1P46940 1657 aa11.55□□□□□ -0.56
SIN3B-208ENST00000596638 INSRP06213 1382 aa11.55□□□□□ -0.56
SIN3B-208ENST00000596638 LRPPRCP42704 1394 aaKnown RBP11.55□□□□□ -0.56
SIN3B-208ENST00000596638 SYNMO15061 1565 aa11.55□□□□□ -0.56
SIN3B-208ENST00000596638 KCNA6P17658 529 aa11.55□□□□□ -0.56
SIN3B-208ENST00000596638 NUTM2DQ5VT03 806 aaPredicted RBP11.55□□□□□ -0.56
SIN3B-208ENST00000596638 PNISRQ8TF01 805 aaKnown RBP11.55□□□□□ -0.56
SIN3B-208ENST00000596638 PIK3C2BO00750 1634 aa11.55□□□□□ -0.56
SIN3B-208ENST00000596638 BRD4O60885 1362 aaPredicted RBP11.54□□□□□ -0.56
SIN3B-208ENST00000596638 TET3O43151 1660 aa11.53□□□□□ -0.56
SIN3B-208ENST00000596638 RALBP1Q15311 655 aa11.53□□□□□ -0.56
SIN3B-208ENST00000596638 B4GALNT3Q6L9W6 998 aa11.53□□□□□ -0.56
SIN3B-208ENST00000596638 PROSER2Q86WR7 435 aaPredicted RBP11.52□□□□□ -0.57
SIN3B-208ENST00000596638 E9PCH4 1651 aa11.52□□□□□ -0.57
SIN3B-208ENST00000596638 TMEM94Q12767 1356 aa11.51□□□□□ -0.57
SIN3B-208ENST00000596638 EFCAB6Q5THR3 1501 aa11.5□□□□□ -0.57
SIN3B-208ENST00000596638 CHGAP10645 457 aaKnown RBP11.5□□□□□ -0.57
SIN3B-208ENST00000596638 PDE3BQ13370 1112 aa11.5□□□□□ -0.57
SIN3B-208ENST00000596638 RGS17Q9UGC6 210 aaPredicted RBP11.5□□□□□ -0.57
SIN3B-208ENST00000596638 NOP58Q9Y2X3 529 aaKnown RBP11.5□□□□□ -0.57
SIN3B-208ENST00000596638 NUP155O75694 1391 aa11.49□□□□□ -0.57
SIN3B-208ENST00000596638 ZFYVE9O95405 1425 aa11.49□□□□□ -0.57
SIN3B-208ENST00000596638 LAMC1P11047 1609 aa11.49□□□□□ -0.57
SIN3B-208ENST00000596638 CACNB1Q02641 598 aaPredicted RBP11.48□□□□□ -0.57
SIN3B-208ENST00000596638 TBX22Q9Y458 520 aa11.48□□□□□ -0.57
SIN3B-208ENST00000596638 MYBBP1AQ9BQG0 1328 aaKnown RBP11.48□□□□□ -0.57
SIN3B-208ENST00000596638 XIRP1Q702N8 1843 aaKnown RBP11.48□□□□□ -0.57
SIN3B-208ENST00000596638 RIMS2Q9UQ26 1411 aa11.47□□□□□ -0.57
SIN3B-208ENST00000596638 TMC1Q8TDI8 760 aa11.47□□□□□ -0.57
SIN3B-208ENST00000596638 CCDC136Q96JN2 1154 aa11.47□□□□□ -0.57
SIN3B-208ENST00000596638 DCAF8L1A6NGE4 600 aa11.46□□□□□ -0.57
SIN3B-208ENST00000596638 FAM135BQ49AJ0 1406 aa11.45□□□□□ -0.58
SIN3B-208ENST00000596638 PLEKHG1Q9ULL1 1385 aa11.45□□□□□ -0.58
SIN3B-208ENST00000596638 IPO9Q96P70 1041 aaKnown RBP11.45□□□□□ -0.58
SIN3B-208ENST00000596638 ADGRB3O60242 1522 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms