RNA–Protein interactions for RNA: ENST00000574085.5

TRPV1-208, Transcript of transient receptor potential cation channel subfamily V member 1, humanhuman

TSL 2

Gene TRPV1, Length 2,644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPV1-208ENST00000574085 GOLGA6L3A6NEY3 463 aa16.31■□□□□ 0.2
TRPV1-208ENST00000574085 PPP2R1AP30153 589 aa16.31■□□□□ 0.2
TRPV1-208ENST00000574085 PRDM15P57071 1507 aaPredicted RBP16.31■□□□□ 0.2
TRPV1-208ENST00000574085 TMF1P82094 1093 aa16.31■□□□□ 0.2
TRPV1-208ENST00000574085 MAPK8IP3Q9UPT6 1336 aa16.3■□□□□ 0.2
TRPV1-208ENST00000574085 PTPRGP23470 1445 aa16.3■□□□□ 0.2
TRPV1-208ENST00000574085 MAGI1Q96QZ7 1491 aaPredicted RBP16.29■□□□□ 0.2
TRPV1-208ENST00000574085 CDC42BPAQ5VT25 1732 aa16.29■□□□□ 0.2
TRPV1-208ENST00000574085 SYNJ2O15056 1496 aa16.29■□□□□ 0.2
TRPV1-208ENST00000574085 SHANK2Q9UPX8 1470 aa16.29■□□□□ 0.2
TRPV1-208ENST00000574085 CLASP1Q7Z460 1538 aa16.29■□□□□ 0.2
TRPV1-208ENST00000574085 ADCY10Q96PN6 1610 aa16.29■□□□□ 0.2
TRPV1-208ENST00000574085 PANK2Q9BZ23 570 aa16.29■□□□□ 0.2
TRPV1-208ENST00000574085 SPINK5Q9NQ38 1064 aaPredicted RBP16.29■□□□□ 0.2
TRPV1-208ENST00000574085 CCDC144AA2RUR9 1427 aa16.28■□□□□ 0.2
TRPV1-208ENST00000574085 NKTRP30414 1462 aaKnown RBP16.28■□□□□ 0.2
TRPV1-208ENST00000574085 HSP90AA1P07900 732 aaKnown RBP16.28■□□□□ 0.2
TRPV1-208ENST00000574085 CLCN1P35523 988 aa16.28■□□□□ 0.2
TRPV1-208ENST00000574085 CCDC146Q8IYE0 955 aa16.28■□□□□ 0.2
TRPV1-208ENST00000574085 LAMC1P11047 1609 aa16.28■□□□□ 0.2
TRPV1-208ENST00000574085 TRMT2AQ8IZ69 625 aaKnown RBP16.28■□□□□ 0.2
TRPV1-208ENST00000574085 FSD2A1L4K1 749 aa16.27■□□□□ 0.2
TRPV1-208ENST00000574085 GZF1Q9H116 711 aaPredicted RBP16.27■□□□□ 0.2
TRPV1-208ENST00000574085 JPH4Q96JJ6 628 aa16.27■□□□□ 0.19
TRPV1-208ENST00000574085 A2MP01023 1474 aa16.26■□□□□ 0.19
TRPV1-208ENST00000574085 TSPY4P0CV99 314 aa16.26■□□□□ 0.19
TRPV1-208ENST00000574085 TSPY10P0CW01 314 aa16.26■□□□□ 0.19
TRPV1-208ENST00000574085 TBC1D2Q9BYX2 928 aa16.26■□□□□ 0.19
TRPV1-208ENST00000574085 BCL11BQ9C0K0 894 aaPredicted RBP16.26■□□□□ 0.19
TRPV1-208ENST00000574085 KNSTRNQ9Y448 316 aa16.26■□□□□ 0.19
TRPV1-208ENST00000574085 UPF2Q9HAU5 1272 aaKnown RBP16.25■□□□□ 0.19
TRPV1-208ENST00000574085 FAM135AQ9P2D6 1515 aa16.25■□□□□ 0.19
TRPV1-208ENST00000574085 CGNL1Q0VF96 1302 aa16.25■□□□□ 0.19
TRPV1-208ENST00000574085 MAGI2Q86UL8 1455 aa16.25■□□□□ 0.19
TRPV1-208ENST00000574085 CLUAP1Q96AJ1 413 aa16.25■□□□□ 0.19
TRPV1-208ENST00000574085 SPRYD3Q8NCJ5 442 aa16.24■□□□□ 0.19
TRPV1-208ENST00000574085 MCM4P33991 863 aa16.23■□□□□ 0.19
TRPV1-208ENST00000574085 TBC1D32Q96NH3 1257 aa16.23■□□□□ 0.19
TRPV1-208ENST00000574085 APAF1O14727 1248 aa16.23■□□□□ 0.19
TRPV1-208ENST00000574085 COG6Q9Y2V7 657 aa16.23■□□□□ 0.19
TRPV1-208ENST00000574085 CANXP27824 592 aaKnown RBP16.22■□□□□ 0.19
TRPV1-208ENST00000574085 PANK1Q8TE04 598 aa16.22■□□□□ 0.19
TRPV1-208ENST00000574085 WDR7Q9Y4E6 1490 aa16.22■□□□□ 0.19
TRPV1-208ENST00000574085 PDE3AQ14432 1141 aa16.21■□□□□ 0.19
TRPV1-208ENST00000574085 AMER1Q5JTC6 1135 aaPredicted RBP16.21■□□□□ 0.19
TRPV1-208ENST00000574085 ABCC10Q5T3U5 1492 aa16.21■□□□□ 0.19
TRPV1-208ENST00000574085 NUP160Q12769 1436 aa16.21■□□□□ 0.19
TRPV1-208ENST00000574085 E9PSI1 815 aa16.21■□□□□ 0.19
TRPV1-208ENST00000574085 EIF2AK4Q9P2K8 1649 aaKnown RBP16.2■□□□□ 0.18
TRPV1-208ENST00000574085 CARMIL2Q6F5E8 1435 aa16.2■□□□□ 0.18
TRPV1-208ENST00000574085 HNRNPMP52272 730 aaKnown RBP eCLIP16.19■□□□□ 0.18
TRPV1-208ENST00000574085 DMRT2Q9Y5R5 561 aa16.19■□□□□ 0.18
TRPV1-208ENST00000574085 MYO5CQ9NQX4 1742 aa16.19■□□□□ 0.18
TRPV1-208ENST00000574085 PIK3C2GO75747 1445 aa16.18■□□□□ 0.18
TRPV1-208ENST00000574085 ABCC2Q92887 1545 aa16.18■□□□□ 0.18
TRPV1-208ENST00000574085 PLA2R1Q13018 1463 aa16.18■□□□□ 0.18
TRPV1-208ENST00000574085 CENPJQ9HC77 1338 aaPredicted RBP16.18■□□□□ 0.18
TRPV1-208ENST00000574085 TRAK2O60296 914 aa16.18■□□□□ 0.18
TRPV1-208ENST00000574085 MRE11P49959 708 aa16.18■□□□□ 0.18
TRPV1-208ENST00000574085 NINLQ9Y2I6 1382 aa16.18■□□□□ 0.18
TRPV1-208ENST00000574085 CCDC141Q6ZP82 1450 aa16.16■□□□□ 0.18
TRPV1-208ENST00000574085 PRDM4Q9UKN5 801 aa16.15■□□□□ 0.18
TRPV1-208ENST00000574085 ASXL1Q8IXJ9 1541 aa16.15■□□□□ 0.18
TRPV1-208ENST00000574085 PMFBP1Q8TBY8 1022 aa16.15■□□□□ 0.18
TRPV1-208ENST00000574085 CHMP5Q9NZZ3 219 aa16.15■□□□□ 0.18
TRPV1-208ENST00000574085 PDZRN3Q9UPQ7 1066 aa16.15■□□□□ 0.18
TRPV1-208ENST00000574085 ESPNB1AK53 854 aa16.14■□□□□ 0.17
TRPV1-208ENST00000574085 MYH16Q9H6N6 1097 aa16.14■□□□□ 0.17
TRPV1-208ENST00000574085 GRPEL1Q9HAV7 217 aa16.14■□□□□ 0.17
TRPV1-208ENST00000574085 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.14■□□□□ 0.171e-6■■□□□ 14.1
TRPV1-208ENST00000574085 RNF17Q9BXT8 1623 aaKnown RBP16.13■□□□□ 0.17
TRPV1-208ENST00000574085 ATP10BO94823 1461 aa16.13■□□□□ 0.17
TRPV1-208ENST00000574085 PLEKHD1A6NEE1 506 aa16.13■□□□□ 0.17
TRPV1-208ENST00000574085 CALD1Q05682 793 aaKnown RBP16.13■□□□□ 0.17
TRPV1-208ENST00000574085 ERBB4Q15303 1308 aa16.13■□□□□ 0.17
TRPV1-208ENST00000574085 SYNMO15061 1565 aa16.13■□□□□ 0.17
TRPV1-208ENST00000574085 PCDHB15Q9Y5E8 787 aa16.13■□□□□ 0.17
TRPV1-208ENST00000574085 PLXNC1O60486 1568 aa16.13■□□□□ 0.17
TRPV1-208ENST00000574085 ZMYM3Q14202 1370 aa16.12■□□□□ 0.17
TRPV1-208ENST00000574085 ARHGEF5Q12774 1597 aa16.12■□□□□ 0.17
TRPV1-208ENST00000574085 ABCA8O94911 1581 aa16.12■□□□□ 0.17
TRPV1-208ENST00000574085 DDX11L8A8MPP1 907 aa16.09■□□□□ 0.17
TRPV1-208ENST00000574085 C22orf23Q9BZE7 217 aa16.09■□□□□ 0.17
TRPV1-208ENST00000574085 TNNQ9UQP3 1299 aa16.09■□□□□ 0.17
TRPV1-208ENST00000574085 RTEL1-TNFRSF6BF6WH68 1400 aa16.08■□□□□ 0.17
TRPV1-208ENST00000574085 RLBP1P12271 317 aa16.08■□□□□ 0.17
TRPV1-208ENST00000574085 MFAP1P55081 439 aaKnown RBP16.08■□□□□ 0.17
TRPV1-208ENST00000574085 CDCA8Q53HL2 280 aa16.08■□□□□ 0.17
TRPV1-208ENST00000574085 TRIM44Q96DX7 344 aaPredicted RBP16.08■□□□□ 0.17
TRPV1-208ENST00000574085 UNC13BO14795 1591 aa16.07■□□□□ 0.16
TRPV1-208ENST00000574085 WWC1Q8IX03 1113 aa16.07■□□□□ 0.16
TRPV1-208ENST00000574085 NGEFQ8N5V2 710 aa16.07■□□□□ 0.16
TRPV1-208ENST00000574085 RWDD1Q9H446 243 aaPredicted RBP16.07■□□□□ 0.16
TRPV1-208ENST00000574085 NPC1L1Q9UHC9 1359 aa16.07■□□□□ 0.16
TRPV1-208ENST00000574085 RARSP54136 660 aaKnown RBP16.06■□□□□ 0.16
TRPV1-208ENST00000574085 ISY1Q9ULR0 285 aaKnown RBP16.06■□□□□ 0.16
TRPV1-208ENST00000574085 IQGAP1P46940 1657 aa16.06■□□□□ 0.16
TRPV1-208ENST00000574085 MYOM1P52179 1685 aa16.06■□□□□ 0.16
TRPV1-208ENST00000574085 HSCBQ8IWL3 235 aa16.05■□□□□ 0.16
TRPV1-208ENST00000574085 AEBP2Q6ZN18 517 aaPredicted RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms