RNA–Protein interactions for RNA: ENST00000574085.5

TRPV1-208, Transcript of transient receptor potential cation channel subfamily V member 1, humanhuman

TSL 2

Gene TRPV1, Length 2,644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPV1-208ENST00000574085 NISCHQ9Y2I1 1504 aa24.28■■□□□ 1.48
TRPV1-208ENST00000574085 HRCP23327 699 aa21.47■■□□□ 1.03
TRPV1-208ENST00000574085 SHROOM4Q9ULL8 1493 aa21.39■■□□□ 1.01
TRPV1-208ENST00000574085 PELP1Q8IZL8 1130 aaKnown RBP21.37■■□□□ 1.01
TRPV1-208ENST00000574085 SUPT5HO00267 1087 aaKnown RBP21.27■■□□□ 1
TRPV1-208ENST00000574085 MYO15BQ96JP2 1530 aa21.08■□□□□ 0.97
TRPV1-208ENST00000574085 PCGF6Q9BYE7 350 aa21.05■□□□□ 0.96
TRPV1-208ENST00000574085 PPARGC1BQ86YN6 1023 aaKnown RBP21.01■□□□□ 0.95
TRPV1-208ENST00000574085 CHIC1Q5VXU3 224 aa20.92■□□□□ 0.94
TRPV1-208ENST00000574085 MYT1Q01538 1121 aa20.84■□□□□ 0.93
TRPV1-208ENST00000574085 ZCCHC6Q5VYS8 1495 aaKnown RBP20.64■□□□□ 0.89
TRPV1-208ENST00000574085 DCAF1Q9Y4B6 1507 aa20.63■□□□□ 0.89
TRPV1-208ENST00000574085 CCDC180Q9P1Z9 1646 aa20.62■□□□□ 0.89
TRPV1-208ENST00000574085 LOC105371045A0A1W2PR82 267 aa20.41■□□□□ 0.86
TRPV1-208ENST00000574085 TRIM26Q12899 539 aaPredicted RBP20.4■□□□□ 0.86
TRPV1-208ENST00000574085 DCAF8L2P0C7V8 631 aa20.29■□□□□ 0.84
TRPV1-208ENST00000574085 SCAF1Q9H7N4 1312 aaKnown RBP20.27■□□□□ 0.83
TRPV1-208ENST00000574085 ZEB1P37275 1124 aaPredicted RBP20.23■□□□□ 0.83
TRPV1-208ENST00000574085 TTBK1Q5TCY1 1321 aaPredicted RBP19.85■□□□□ 0.77
TRPV1-208ENST00000574085 ACIN1Q9UKV3 1341 aaKnown RBP19.8■□□□□ 0.76
TRPV1-208ENST00000574085 NEUROD1Q13562 356 aa19.73■□□□□ 0.75
TRPV1-208ENST00000574085 TRIM41Q8WV44 630 aa19.69■□□□□ 0.74
TRPV1-208ENST00000574085 FAM9AQ8IZU1 332 aaPredicted RBP19.67■□□□□ 0.74
TRPV1-208ENST00000574085 ABCC9O60706 1549 aa19.63■□□□□ 0.73
TRPV1-208ENST00000574085 GTF3C3Q9Y5Q9 886 aa19.62■□□□□ 0.73
TRPV1-208ENST00000574085 EHMT2Q96KQ7 1210 aa19.57■□□□□ 0.72
TRPV1-208ENST00000574085 CENPBP07199 599 aaPredicted RBP19.56■□□□□ 0.72
TRPV1-208ENST00000574085 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.54■□□□□ 0.72
TRPV1-208ENST00000574085 CCER1Q8TC90 406 aaPredicted RBP19.51■□□□□ 0.71
TRPV1-208ENST00000574085 DIEXFQ68CQ4 756 aaKnown RBP19.5■□□□□ 0.71
TRPV1-208ENST00000574085 RSF1Q96T23 1441 aaPredicted RBP19.49■□□□□ 0.71
TRPV1-208ENST00000574085 SCRIBQ14160 1630 aa19.44■□□□□ 0.7
TRPV1-208ENST00000574085 RB1CC1Q8TDY2 1594 aa19.44■□□□□ 0.7
TRPV1-208ENST00000574085 BCL11AQ9H165 835 aa19.32■□□□□ 0.68
TRPV1-208ENST00000574085 PRKCSHP14314 528 aaPredicted RBP19.27■□□□□ 0.68
TRPV1-208ENST00000574085 YTHDC1Q96MU7 727 aaKnown RBP19.18■□□□□ 0.66
TRPV1-208ENST00000574085 ZNF316A6NFI3 1004 aaPredicted RBP19.14■□□□□ 0.65
TRPV1-208ENST00000574085 NACADO15069 1562 aa19.11■□□□□ 0.65
TRPV1-208ENST00000574085 WRNQ14191 1432 aaPredicted RBP eCLIP19.02■□□□□ 0.64
TRPV1-208ENST00000574085 CECR2Q9BXF3 1484 aa19.02■□□□□ 0.64
TRPV1-208ENST00000574085 MIER1Q8N108 512 aa19■□□□□ 0.63
TRPV1-208ENST00000574085 MROH2BQ7Z745 1585 aa18.94■□□□□ 0.62
TRPV1-208ENST00000574085 CEP162Q5TB80 1403 aa18.93■□□□□ 0.62
TRPV1-208ENST00000574085 WIZO95785 1651 aa18.9■□□□□ 0.62
TRPV1-208ENST00000574085 EIF4G1Q04637 1599 aaKnown RBP18.88■□□□□ 0.61
TRPV1-208ENST00000574085 ERICH6Q7L0X2 663 aa18.84■□□□□ 0.61
TRPV1-208ENST00000574085 TNIKQ9UKE5 1360 aa18.79■□□□□ 0.6
TRPV1-208ENST00000574085 BAZ1AQ9NRL2 1556 aaPredicted RBP18.78■□□□□ 0.6
TRPV1-208ENST00000574085 CCDC88BA6NC98 1476 aa18.78■□□□□ 0.6
TRPV1-208ENST00000574085 ABCC8Q09428 1581 aa18.76■□□□□ 0.59
TRPV1-208ENST00000574085 ANP32EQ9BTT0 268 aa18.73■□□□□ 0.59
TRPV1-208ENST00000574085 HNRNPUL2Q1KMD3 747 aaKnown RBP18.72■□□□□ 0.59
TRPV1-208ENST00000574085 SUPT16HQ9Y5B9 1047 aaKnown RBP18.7■□□□□ 0.58
TRPV1-208ENST00000574085 SOGA1O94964 1423 aa18.7■□□□□ 0.58
TRPV1-208ENST00000574085 APLP2Q06481 763 aa18.7■□□□□ 0.58
TRPV1-208ENST00000574085 CLSPNQ9HAW4 1339 aa18.69■□□□□ 0.58
TRPV1-208ENST00000574085 UBTFP17480 764 aaKnown RBP18.69■□□□□ 0.58
TRPV1-208ENST00000574085 CSRNP3Q8WYN3 585 aa18.62■□□□□ 0.57
TRPV1-208ENST00000574085 TSHZ2Q9NRE2 1034 aa18.6■□□□□ 0.57
TRPV1-208ENST00000574085 EEA1Q15075 1411 aa18.6■□□□□ 0.57
TRPV1-208ENST00000574085 UNC13AQ9UPW8 1703 aa18.6■□□□□ 0.57
TRPV1-208ENST00000574085 RUSC2Q8N2Y8 1516 aa18.59■□□□□ 0.57
TRPV1-208ENST00000574085 GOLGA3Q08378 1498 aa18.58■□□□□ 0.57
TRPV1-208ENST00000574085 TOP2AP11388 1531 aaKnown RBP18.54■□□□□ 0.56
TRPV1-208ENST00000574085 PABPN1Q86U42 306 aaKnown RBP eCLIP18.53■□□□□ 0.563e-7■■■■□ 25.8
TRPV1-208ENST00000574085 SMARCA4P51532 1647 aa18.51■□□□□ 0.55
TRPV1-208ENST00000574085 SMARCA2P51531 1590 aa18.48■□□□□ 0.55
TRPV1-208ENST00000574085 CLIP1P30622 1438 aa18.42■□□□□ 0.54
TRPV1-208ENST00000574085 VPS8Q8N3P4 1428 aa18.41■□□□□ 0.54
TRPV1-208ENST00000574085 BICRAQ9NZM4 1560 aa18.39■□□□□ 0.53
TRPV1-208ENST00000574085 CEP164Q9UPV0 1460 aa18.39■□□□□ 0.53
TRPV1-208ENST00000574085 DHX57Q6P158 1386 aaKnown RBP18.38■□□□□ 0.53
TRPV1-208ENST00000574085 KIF21BO75037 1637 aa18.35■□□□□ 0.53
TRPV1-208ENST00000574085 BCANQ96GW7 911 aa18.32■□□□□ 0.52
TRPV1-208ENST00000574085 KCNH8Q96L42 1107 aa18.26■□□□□ 0.51
TRPV1-208ENST00000574085 RANGAP1P46060 587 aaPredicted RBP18.25■□□□□ 0.51
TRPV1-208ENST00000574085 BAZ1BQ9UIG0 1483 aaKnown RBP18.23■□□□□ 0.51
TRPV1-208ENST00000574085 FKBP8Q14318 412 aa18.23■□□□□ 0.51
TRPV1-208ENST00000574085 RAPGEF2Q9Y4G8 1499 aa18.2■□□□□ 0.5
TRPV1-208ENST00000574085 SYNJ1O43426 1573 aa18.2■□□□□ 0.5
TRPV1-208ENST00000574085 RBM19Q9Y4C8 960 aaKnown RBP18.17■□□□□ 0.5
TRPV1-208ENST00000574085 PEG3Q9GZU2 1588 aa18.11■□□□□ 0.49
TRPV1-208ENST00000574085 NEFLP07196 543 aa18.09■□□□□ 0.49
TRPV1-208ENST00000574085 KANK4Q5T7N3 995 aaPredicted RBP18.08■□□□□ 0.49
TRPV1-208ENST00000574085 ATAD2BQ9ULI0 1458 aa18.08■□□□□ 0.48
TRPV1-208ENST00000574085 RRBP1Q9P2E9 1410 aaKnown RBP18.06■□□□□ 0.48
TRPV1-208ENST00000574085 CUX2O14529 1486 aa18.06■□□□□ 0.48
TRPV1-208ENST00000574085 ARAP1Q96P48 1450 aa18.04■□□□□ 0.48
TRPV1-208ENST00000574085 ITGAEP38570 1179 aa18.04■□□□□ 0.48
TRPV1-208ENST00000574085 DDX10Q13206 875 aaKnown RBP18.02■□□□□ 0.48
TRPV1-208ENST00000574085 MSH5O43196 834 aa18■□□□□ 0.47
TRPV1-208ENST00000574085 ANO8Q9HCE9 1232 aaPredicted RBP17.99■□□□□ 0.47
TRPV1-208ENST00000574085 CCNB3Q8WWL7 1395 aa17.98■□□□□ 0.47
TRPV1-208ENST00000574085 MAPKBP1O60336 1514 aa17.97■□□□□ 0.47
TRPV1-208ENST00000574085 TRIM52Q96A61 297 aa17.96■□□□□ 0.47
TRPV1-208ENST00000574085 RAB3GAP2Q9H2M9 1393 aa17.94■□□□□ 0.46
TRPV1-208ENST00000574085 WDR97A6NE52 1622 aa17.92■□□□□ 0.46
TRPV1-208ENST00000574085 ERICH3Q5RHP9 1530 aa17.92■□□□□ 0.46
TRPV1-208ENST00000574085 PPP1R15AO75807 674 aaPredicted RBP17.91■□□□□ 0.46
TRPV1-208ENST00000574085 CCER2I3L3R5 266 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms