RNA–Protein interactions for RNA: ENST00000567258.1

LINC00564-201, long intergenic non-protein coding RNA 564, humanhuman

BASIC

Gene LINC00564, Length 1,119 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00564-201ENST00000567258 ABCC5O15440 1437 aa16.01■□□□□ 0.15
LINC00564-201ENST00000567258 TCOF1Q13428 1488 aaKnown RBP16■□□□□ 0.15
LINC00564-201ENST00000567258 FAM50AQ14320 339 aaKnown RBP16■□□□□ 0.15
LINC00564-201ENST00000567258 ERBINQ96RT1 1412 aa16■□□□□ 0.15
LINC00564-201ENST00000567258 ANKRD30AQ9BXX3 1397 aa16■□□□□ 0.15
LINC00564-201ENST00000567258 ABCC3O15438 1527 aa15.99■□□□□ 0.15
LINC00564-201ENST00000567258 NLRP1Q9C000 1473 aa15.99■□□□□ 0.15
LINC00564-201ENST00000567258 THEMISQ8N1K5 641 aaPredicted RBP15.99■□□□□ 0.15
LINC00564-201ENST00000567258 CHIC2Q9UKJ5 165 aa15.99■□□□□ 0.15
LINC00564-201ENST00000567258 KANK1Q14678 1352 aa15.99■□□□□ 0.15
LINC00564-201ENST00000567258 UGGT1Q9NYU2 1555 aa15.97■□□□□ 0.15
LINC00564-201ENST00000567258 PAK3O75914 559 aaPredicted RBP15.97■□□□□ 0.15
LINC00564-201ENST00000567258 ANKLE2Q86XL3 938 aa15.96■□□□□ 0.15
LINC00564-201ENST00000567258 MROH1Q8NDA8 1641 aa15.96■□□□□ 0.15
LINC00564-201ENST00000567258 PLSCR2Q9NRY7 297 aa15.95■□□□□ 0.14
LINC00564-201ENST00000567258 PRDM15P57071 1507 aaPredicted RBP15.94■□□□□ 0.14
LINC00564-201ENST00000567258 LTBP4Q8N2S1 1624 aa15.94■□□□□ 0.14
LINC00564-201ENST00000567258 SPATA31D1Q6ZQQ2 1576 aa15.94■□□□□ 0.14
LINC00564-201ENST00000567258 IQSEC2Q5JU85 1478 aa15.93■□□□□ 0.14
LINC00564-201ENST00000567258 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.93■□□□□ 0.14
LINC00564-201ENST00000567258 PHF12Q96QT6 1004 aa15.93■□□□□ 0.14
LINC00564-201ENST00000567258 DEPDC5O75140 1603 aa15.93■□□□□ 0.14
LINC00564-201ENST00000567258 ZNF335Q9H4Z2 1342 aaPredicted RBP15.93■□□□□ 0.14
LINC00564-201ENST00000567258 ERVK-7P63135 1459 aa15.92■□□□□ 0.14
LINC00564-201ENST00000567258 UBR1Q8IWV7 1749 aa15.88■□□□□ 0.13
LINC00564-201ENST00000567258 ARHGAP31Q2M1Z3 1444 aa15.88■□□□□ 0.13
LINC00564-201ENST00000567258 MNX1P50219 401 aaPredicted RBP15.88■□□□□ 0.13
LINC00564-201ENST00000567258 ADGRL2O95490 1459 aa15.88■□□□□ 0.13
LINC00564-201ENST00000567258 IQGAP1P46940 1657 aa15.88■□□□□ 0.13
LINC00564-201ENST00000567258 NEURL4Q96JN8 1562 aa15.87■□□□□ 0.13
LINC00564-201ENST00000567258 NPHP4O75161 1426 aaPredicted RBP15.86■□□□□ 0.13
LINC00564-201ENST00000567258 UBAP1LF5GYI3 381 aa15.85■□□□□ 0.13
LINC00564-201ENST00000567258 ANKRD50Q9ULJ7 1429 aa15.85■□□□□ 0.13
LINC00564-201ENST00000567258 CPS1P31327 1500 aa15.84■□□□□ 0.13
LINC00564-201ENST00000567258 EID1Q9Y6B2 187 aa15.84■□□□□ 0.13
LINC00564-201ENST00000567258 MED14O60244 1454 aa15.84■□□□□ 0.13
LINC00564-201ENST00000567258 LMTK2Q8IWU2 1503 aa15.83■□□□□ 0.12
LINC00564-201ENST00000567258 PIK3C2BO00750 1634 aa15.83■□□□□ 0.12
LINC00564-201ENST00000567258 PPARGC1BQ86YN6 1023 aaKnown RBP15.82■□□□□ 0.12
LINC00564-201ENST00000567258 KDM5AP29375 1690 aaKnown RBP15.81■□□□□ 0.12
LINC00564-201ENST00000567258 ITGAEP38570 1179 aa15.81■□□□□ 0.12
LINC00564-201ENST00000567258 VWDEQ8N2E2 1590 aa15.81■□□□□ 0.12
LINC00564-201ENST00000567258 EFCAB6Q5THR3 1501 aa15.8■□□□□ 0.12
LINC00564-201ENST00000567258 SCAF11Q99590 1463 aaKnown RBP15.8■□□□□ 0.12
LINC00564-201ENST00000567258 TXNDC2Q86VQ3 553 aa15.8■□□□□ 0.12
LINC00564-201ENST00000567258 OTUD5Q96G74 571 aa15.8■□□□□ 0.12
LINC00564-201ENST00000567258 GCC2Q8IWJ2 1684 aa15.79■□□□□ 0.12
LINC00564-201ENST00000567258 POTEB2H3BUK9 544 aa15.79■□□□□ 0.12
LINC00564-201ENST00000567258 TOM1O60784 492 aa15.79■□□□□ 0.12
LINC00564-201ENST00000567258 TET3O43151 1660 aa15.79■□□□□ 0.12
LINC00564-201ENST00000567258 SLIT1O75093 1534 aa15.78■□□□□ 0.12
LINC00564-201ENST00000567258 ROCK1Q13464 1354 aa15.77■□□□□ 0.12
LINC00564-201ENST00000567258 SLC52A1Q9NWF4 448 aa15.77■□□□□ 0.12
LINC00564-201ENST00000567258 RPRD2Q5VT52 1461 aaKnown RBP15.77■□□□□ 0.11
LINC00564-201ENST00000567258 IDI1Q13907 227 aa15.76■□□□□ 0.11
LINC00564-201ENST00000567258 UNC13BO14795 1591 aa15.75■□□□□ 0.11
LINC00564-201ENST00000567258 PELP1Q8IZL8 1130 aaKnown RBP15.75■□□□□ 0.11
LINC00564-201ENST00000567258 ARHGAP23Q9P227 1491 aa15.75■□□□□ 0.11
LINC00564-201ENST00000567258 SYNMO15061 1565 aa15.75■□□□□ 0.11
LINC00564-201ENST00000567258 MYO5BQ9ULV0 1848 aa15.74■□□□□ 0.11
LINC00564-201ENST00000567258 BCANQ96GW7 911 aa15.74■□□□□ 0.11
LINC00564-201ENST00000567258 TMEM2Q9UHN6 1383 aa15.74■□□□□ 0.11
LINC00564-201ENST00000567258 LTKP29376 864 aa15.73■□□□□ 0.11
LINC00564-201ENST00000567258 HDGFP51858 240 aaKnown RBP15.73■□□□□ 0.11
LINC00564-201ENST00000567258 PIP4K2BP78356 416 aa15.73■□□□□ 0.11
LINC00564-201ENST00000567258 NOS1P29475 1434 aa15.73■□□□□ 0.11
LINC00564-201ENST00000567258 ADGRB3O60242 1522 aa15.73■□□□□ 0.11
LINC00564-201ENST00000567258 STRCP1A6NGW2 1772 aa15.72■□□□□ 0.11
LINC00564-201ENST00000567258 DISP3Q9P2K9 1392 aa15.72■□□□□ 0.11
LINC00564-201ENST00000567258 MS4A3Q96HJ5 214 aa15.71■□□□□ 0.11
LINC00564-201ENST00000567258 IQGAP3Q86VI3 1631 aa15.71■□□□□ 0.11
LINC00564-201ENST00000567258 E9PCH4 1651 aa15.7■□□□□ 0.1
LINC00564-201ENST00000567258 CHGAP10645 457 aaKnown RBP15.7■□□□□ 0.1
LINC00564-201ENST00000567258 NUP155O75694 1391 aa15.7■□□□□ 0.1
LINC00564-201ENST00000567258 PPP1R15AO75807 674 aaPredicted RBP15.69■□□□□ 0.1
LINC00564-201ENST00000567258 LRRC7Q96NW7 1537 aa15.67■□□□□ 0.1
LINC00564-201ENST00000567258 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.65■□□□□ 0.1
LINC00564-201ENST00000567258 TSPYL2Q9H2G4 693 aaPredicted RBP15.65■□□□□ 0.1
LINC00564-201ENST00000567258 TMEM131LA2VDJ0 1609 aa15.65■□□□□ 0.1
LINC00564-201ENST00000567258 ASTLQ6HA08 431 aaPredicted RBP15.64■□□□□ 0.09
LINC00564-201ENST00000567258 PROM2Q8N271 834 aa15.64■□□□□ 0.09
LINC00564-201ENST00000567258 SLC26A8Q96RN1 970 aa15.64■□□□□ 0.09
LINC00564-201ENST00000567258 RRBP1Q9P2E9 1410 aaKnown RBP15.64■□□□□ 0.09
LINC00564-201ENST00000567258 SPHKAPQ2M3C7 1700 aa15.63■□□□□ 0.09
LINC00564-201ENST00000567258 XIRP1Q702N8 1843 aaKnown RBP15.63■□□□□ 0.09
LINC00564-201ENST00000567258 RIMS2Q9UQ26 1411 aa15.62■□□□□ 0.09
LINC00564-201ENST00000567258 ATMINO43313 823 aaPredicted RBP15.62■□□□□ 0.09
LINC00564-201ENST00000567258 KCNA6P17658 529 aa15.62■□□□□ 0.09
LINC00564-201ENST00000567258 HSPA1LP34931 641 aa15.62■□□□□ 0.09
LINC00564-201ENST00000567258 METRNQ9UJH8 293 aa15.62■□□□□ 0.09
LINC00564-201ENST00000567258 PROSER2Q86WR7 435 aaPredicted RBP15.61■□□□□ 0.09
LINC00564-201ENST00000567258 PLEKHG1Q9ULL1 1385 aa15.6■□□□□ 0.09
LINC00564-201ENST00000567258 CHD2O14647 1828 aaKnown RBP15.59■□□□□ 0.09
LINC00564-201ENST00000567258 ZFYVE9O95405 1425 aa15.59■□□□□ 0.09
LINC00564-201ENST00000567258 SLC39A7Q92504 469 aa15.58■□□□□ 0.08
LINC00564-201ENST00000567258 TRIM52Q96A61 297 aa15.58■□□□□ 0.08
LINC00564-201ENST00000567258 KIF1BO60333 1816 aa15.58■□□□□ 0.08
LINC00564-201ENST00000567258 C7P10643 843 aa15.57■□□□□ 0.08
LINC00564-201ENST00000567258 ZNF326Q5BKZ1 582 aaKnown RBP15.57■□□□□ 0.08
LINC00564-201ENST00000567258 NKTRP30414 1462 aaKnown RBP15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms