RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 ADGRB3O60242 1522 aa18.68■□□□□ 0.58
SLIRP-211ENST00000557623 NEURL4Q96JN8 1562 aa18.68■□□□□ 0.58
SLIRP-211ENST00000557623 SLIT1O75093 1534 aa18.67■□□□□ 0.58
SLIRP-211ENST00000557623 MYO5BQ9ULV0 1848 aa18.67■□□□□ 0.58
SLIRP-211ENST00000557623 SETD5Q9C0A6 1442 aa18.66■□□□□ 0.58
SLIRP-211ENST00000557623 ARHGAP23Q9P227 1491 aa18.65■□□□□ 0.58
SLIRP-211ENST00000557623 MED14O60244 1454 aa18.65■□□□□ 0.58
SLIRP-211ENST00000557623 IQGAP1P46940 1657 aa18.64■□□□□ 0.57
SLIRP-211ENST00000557623 TMEM131LA2VDJ0 1609 aa18.63■□□□□ 0.57
SLIRP-211ENST00000557623 EID1Q9Y6B2 187 aa18.62■□□□□ 0.57
SLIRP-211ENST00000557623 TMEM2Q9UHN6 1383 aa18.62■□□□□ 0.57
SLIRP-211ENST00000557623 NPHP4O75161 1426 aaPredicted RBP18.62■□□□□ 0.57
SLIRP-211ENST00000557623 SCAF11Q99590 1463 aaKnown RBP18.62■□□□□ 0.57
SLIRP-211ENST00000557623 TXNDC2Q86VQ3 553 aa18.6■□□□□ 0.57
SLIRP-211ENST00000557623 TRPM2O94759 1503 aa18.59■□□□□ 0.57
SLIRP-211ENST00000557623 KIF1BO60333 1816 aa18.59■□□□□ 0.57
SLIRP-211ENST00000557623 RAB3GAP2Q9H2M9 1393 aa18.57■□□□□ 0.56
SLIRP-211ENST00000557623 CHGAP10645 457 aaKnown RBP18.57■□□□□ 0.56
SLIRP-211ENST00000557623 LTKP29376 864 aa18.57■□□□□ 0.56
SLIRP-211ENST00000557623 HDGFP51858 240 aaKnown RBP18.57■□□□□ 0.56
SLIRP-211ENST00000557623 LTBP4Q8N2S1 1624 aa18.56■□□□□ 0.56
SLIRP-211ENST00000557623 CLTCL1P53675 1640 aa18.56■□□□□ 0.56
SLIRP-211ENST00000557623 CERKQ8TCT0 537 aa18.55■□□□□ 0.56
SLIRP-211ENST00000557623 MPHOSPH9Q99550 1183 aa18.55■□□□□ 0.56
SLIRP-211ENST00000557623 ZNF335Q9H4Z2 1342 aaPredicted RBP18.53■□□□□ 0.56
SLIRP-211ENST00000557623 HRCP23327 699 aa18.53■□□□□ 0.56
SLIRP-211ENST00000557623 RIMS2Q9UQ26 1411 aa18.53■□□□□ 0.56
SLIRP-211ENST00000557623 ZFYVE9O95405 1425 aa18.52■□□□□ 0.56
SLIRP-211ENST00000557623 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.52■□□□□ 0.56
SLIRP-211ENST00000557623 CAPN15O75808 1086 aa18.5■□□□□ 0.55
SLIRP-211ENST00000557623 IQSEC2Q5JU85 1478 aa18.5■□□□□ 0.55
SLIRP-211ENST00000557623 CPS1P31327 1500 aa18.49■□□□□ 0.55
SLIRP-211ENST00000557623 PPP1R15AO75807 674 aaPredicted RBP18.49■□□□□ 0.55
SLIRP-211ENST00000557623 SPINK5Q9NQ38 1064 aaPredicted RBP18.48■□□□□ 0.55
SLIRP-211ENST00000557623 PLEKHG1Q9ULL1 1385 aa18.47■□□□□ 0.55
SLIRP-211ENST00000557623 FBXO41Q8TF61 875 aa18.47■□□□□ 0.55
SLIRP-211ENST00000557623 STRCP1A6NGW2 1772 aa18.46■□□□□ 0.55
SLIRP-211ENST00000557623 ZNF326Q5BKZ1 582 aaKnown RBP18.46■□□□□ 0.55
SLIRP-211ENST00000557623 BCANQ96GW7 911 aa18.46■□□□□ 0.55
SLIRP-211ENST00000557623 CCDC144AA2RUR9 1427 aa18.46■□□□□ 0.55
SLIRP-211ENST00000557623 NEXMIFQ5QGS0 1516 aa18.43■□□□□ 0.54
SLIRP-211ENST00000557623 DIP2AQ14689 1571 aa18.42■□□□□ 0.54
SLIRP-211ENST00000557623 ILDR1Q86SU0 546 aaPredicted RBP18.42■□□□□ 0.54
SLIRP-211ENST00000557623 PPLO60437 1756 aa18.41■□□□□ 0.54
SLIRP-211ENST00000557623 NUTM2DQ5VT03 806 aaPredicted RBP18.41■□□□□ 0.54
SLIRP-211ENST00000557623 SLC26A8Q96RN1 970 aa18.41■□□□□ 0.54
SLIRP-211ENST00000557623 CHD2O14647 1828 aaKnown RBP18.41■□□□□ 0.54
SLIRP-211ENST00000557623 RPGRIP1LQ68CZ1 1315 aa18.4■□□□□ 0.54
SLIRP-211ENST00000557623 TBX22Q9Y458 520 aa18.39■□□□□ 0.53
SLIRP-211ENST00000557623 NWD1Q149M9 1564 aa18.38■□□□□ 0.53
SLIRP-211ENST00000557623 SETBP1Q9Y6X0 1596 aa18.38■□□□□ 0.53
SLIRP-211ENST00000557623 KCNA6P17658 529 aa18.37■□□□□ 0.53
SLIRP-211ENST00000557623 ZNF219Q9P2Y4 722 aaPredicted RBP18.37■□□□□ 0.53
SLIRP-211ENST00000557623 ADAMTS13Q76LX8 1427 aa18.37■□□□□ 0.53
SLIRP-211ENST00000557623 VGFO15240 615 aaPredicted RBP18.36■□□□□ 0.53
SLIRP-211ENST00000557623 TRIM26Q12899 539 aaPredicted RBP18.36■□□□□ 0.53
SLIRP-211ENST00000557623 LRRC7Q96NW7 1537 aa18.36■□□□□ 0.53
SLIRP-211ENST00000557623 IFT172Q9UG01 1749 aa18.36■□□□□ 0.53
SLIRP-211ENST00000557623 NRXN3Q9Y4C0 1643 aa18.36■□□□□ 0.53
SLIRP-211ENST00000557623 PIK3R4Q99570 1358 aa18.35■□□□□ 0.53
SLIRP-211ENST00000557623 XIRP1Q702N8 1843 aaKnown RBP18.35■□□□□ 0.53
SLIRP-211ENST00000557623 NKTRP30414 1462 aaKnown RBP18.34■□□□□ 0.53
SLIRP-211ENST00000557623 SPATA31E1Q6ZUB1 1445 aa18.34■□□□□ 0.53
SLIRP-211ENST00000557623 ANKRD30BQ9BXX2 1392 aa18.33■□□□□ 0.53
SLIRP-211ENST00000557623 ATXN8OSP0DMR3 200 aa18.32■□□□□ 0.52
SLIRP-211ENST00000557623 RGL3Q3MIN7 710 aa18.32■□□□□ 0.52
SLIRP-211ENST00000557623 UBAP1LF5GYI3 381 aa18.3■□□□□ 0.52
SLIRP-211ENST00000557623 TOM1O60784 492 aa18.29■□□□□ 0.52
SLIRP-211ENST00000557623 PROSER2Q86WR7 435 aaPredicted RBP18.29■□□□□ 0.52
SLIRP-211ENST00000557623 SETD1AO15047 1707 aaKnown RBP18.29■□□□□ 0.52
SLIRP-211ENST00000557623 ALKQ9UM73 1620 aa18.27■□□□□ 0.51
SLIRP-211ENST00000557623 XRN1Q8IZH2 1706 aaKnown RBP18.26■□□□□ 0.51
SLIRP-211ENST00000557623 TMEM94Q12767 1356 aa18.26■□□□□ 0.51
SLIRP-211ENST00000557623 AMOTL2Q9Y2J4 779 aa18.24■□□□□ 0.51
SLIRP-211ENST00000557623 PTPRUQ92729 1446 aa18.23■□□□□ 0.51
SLIRP-211ENST00000557623 NCOA3Q9Y6Q9 1424 aa18.23■□□□□ 0.51
SLIRP-211ENST00000557623 MYOM2P54296 1465 aa18.23■□□□□ 0.51
SLIRP-211ENST00000557623 METP08581 1390 aa18.23■□□□□ 0.51
SLIRP-211ENST00000557623 ADGRF5Q8IZF2 1346 aa18.23■□□□□ 0.51
SLIRP-211ENST00000557623 LAMC1P11047 1609 aa18.21■□□□□ 0.51
SLIRP-211ENST00000557623 MSH6P52701 1360 aa18.2■□□□□ 0.5
SLIRP-211ENST00000557623 ATF5Q9Y2D1 282 aaPredicted RBP18.2■□□□□ 0.5
SLIRP-211ENST00000557623 PIK3C2GO75747 1445 aa18.2■□□□□ 0.5
SLIRP-211ENST00000557623 STAC3Q96MF2 364 aa18.19■□□□□ 0.5
SLIRP-211ENST00000557623 NRXN1Q9ULB1 1477 aa18.19■□□□□ 0.5
SLIRP-211ENST00000557623 PIP4K2BP78356 416 aa18.18■□□□□ 0.5
SLIRP-211ENST00000557623 RBM33Q96EV2 1170 aaKnown RBP18.18■□□□□ 0.5
SLIRP-211ENST00000557623 DSG3P32926 999 aa18.17■□□□□ 0.5
SLIRP-211ENST00000557623 C14orf37Q86TY3 774 aa18.17■□□□□ 0.5
SLIRP-211ENST00000557623 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.17■□□□□ 0.5
SLIRP-211ENST00000557623 PTCH1Q13635 1447 aa18.15■□□□□ 0.5
SLIRP-211ENST00000557623 PRAG1Q86YV5 1406 aa18.15■□□□□ 0.5
SLIRP-211ENST00000557623 KNDC1Q76NI1 1749 aa18.15■□□□□ 0.5
SLIRP-211ENST00000557623 DHX57Q6P158 1386 aaKnown RBP18.15■□□□□ 0.5
SLIRP-211ENST00000557623 DCAF11Q8TEB1 546 aa18.14■□□□□ 0.49
SLIRP-211ENST00000557623 C19orf44Q9H6X5 657 aa18.14■□□□□ 0.49
SLIRP-211ENST00000557623 C14orf93Q9H972 538 aaKnown RBP18.13■□□□□ 0.49
SLIRP-211ENST00000557623 KDM2AQ9Y2K7 1162 aa18.12■□□□□ 0.49
SLIRP-211ENST00000557623 NALCNQ8IZF0 1738 aa18.12■□□□□ 0.49
SLIRP-211ENST00000557623 CADPS2Q86UW7 1296 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms