RNA–Protein interactions for RNA: ENST00000554465.5

SRSF5-207, Transcript of serine and arginine rich splicing factor 5, humanhuman

TSL 1 (best)

Gene SRSF5, Length 3,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-207ENST00000554465 NEXMIFQ5QGS0 1516 aa11.67□□□□□ -0.54
SRSF5-207ENST00000554465 NUP155O75694 1391 aa11.66□□□□□ -0.54
SRSF5-207ENST00000554465 SLIT1O75093 1534 aa11.65□□□□□ -0.54
SRSF5-207ENST00000554465 PDIA4P13667 645 aaKnown RBP11.65□□□□□ -0.55
SRSF5-207ENST00000554465 PLPPR3Q6T4P5 718 aa11.65□□□□□ -0.55
SRSF5-207ENST00000554465 DLC1Q96QB1 1528 aa11.64□□□□□ -0.55
SRSF5-207ENST00000554465 ARID4BQ4LE39 1312 aaPredicted RBP11.62□□□□□ -0.55
SRSF5-207ENST00000554465 CCDC144AA2RUR9 1427 aa11.62□□□□□ -0.55
SRSF5-207ENST00000554465 ARHGAP23Q9P227 1491 aa11.62□□□□□ -0.55
SRSF5-207ENST00000554465 AMER1Q5JTC6 1135 aaPredicted RBP11.62□□□□□ -0.55
SRSF5-207ENST00000554465 AFAP1Q8N556 730 aa11.61□□□□□ -0.55
SRSF5-207ENST00000554465 MYO5BQ9ULV0 1848 aa11.61□□□□□ -0.55
SRSF5-207ENST00000554465 RRP7BPQ9NSQ0 103 aa11.6□□□□□ -0.55
SRSF5-207ENST00000554465 ZNF777Q9ULD5 760 aaPredicted RBP11.6□□□□□ -0.55
SRSF5-207ENST00000554465 NRXN3Q9Y4C0 1643 aa11.57□□□□□ -0.56
SRSF5-207ENST00000554465 PPP1R15AO75807 674 aaPredicted RBP11.57□□□□□ -0.56
SRSF5-207ENST00000554465 ARID3CA6NKF2 412 aa11.57□□□□□ -0.56
SRSF5-207ENST00000554465 SLC52A1Q9NWF4 448 aa11.57□□□□□ -0.56
SRSF5-207ENST00000554465 SBNO2Q9Y2G9 1366 aa11.57□□□□□ -0.56
SRSF5-207ENST00000554465 USP32Q8NFA0 1604 aa11.57□□□□□ -0.56
SRSF5-207ENST00000554465 ADGRB2O60241 1585 aa11.57□□□□□ -0.56
SRSF5-207ENST00000554465 HIRIP3Q9BW71 556 aaPredicted RBP11.56□□□□□ -0.56
SRSF5-207ENST00000554465 ADGRB1O14514 1584 aa11.56□□□□□ -0.56
SRSF5-207ENST00000554465 PIK3C2GO75747 1445 aa11.56□□□□□ -0.56
SRSF5-207ENST00000554465 ARHGEF28Q8N1W1 1705 aaKnown RBP11.55□□□□□ -0.56
SRSF5-207ENST00000554465 SLC4A1APQ9BWU0 796 aaKnown RBP11.55□□□□□ -0.56
SRSF5-207ENST00000554465 A2ML1A8K2U0 1454 aa11.55□□□□□ -0.56
SRSF5-207ENST00000554465 SETD1BQ9UPS6 1966 aaKnown RBP11.55□□□□□ -0.56
SRSF5-207ENST00000554465 PDE4CQ08493 712 aa11.54□□□□□ -0.56
SRSF5-207ENST00000554465 CPS1P31327 1500 aa11.54□□□□□ -0.56
SRSF5-207ENST00000554465 TONSLQ96HA7 1378 aa11.54□□□□□ -0.56
SRSF5-207ENST00000554465 NWD1Q149M9 1564 aa11.53□□□□□ -0.56
SRSF5-207ENST00000554465 MED14O60244 1454 aa11.52□□□□□ -0.56
SRSF5-207ENST00000554465 PKD2Q13563 968 aa11.52□□□□□ -0.56
SRSF5-207ENST00000554465 CHIC2Q9UKJ5 165 aa11.52□□□□□ -0.56
SRSF5-207ENST00000554465 USP54Q70EL1 1684 aa11.52□□□□□ -0.57
SRSF5-207ENST00000554465 PUS7Q96PZ0 661 aaKnown RBP11.52□□□□□ -0.57
SRSF5-207ENST00000554465 SIN3AQ96ST3 1273 aa11.52□□□□□ -0.57
SRSF5-207ENST00000554465 TECPR2O15040 1411 aa11.51□□□□□ -0.57
SRSF5-207ENST00000554465 CEP170BQ9Y4F5 1589 aaPredicted RBP11.51□□□□□ -0.57
SRSF5-207ENST00000554465 XRN1Q8IZH2 1706 aaKnown RBP11.51□□□□□ -0.57
SRSF5-207ENST00000554465 SIRT1Q96EB6 747 aa11.48□□□□□ -0.57
SRSF5-207ENST00000554465 RAPGEF3O95398 923 aa11.47□□□□□ -0.57
SRSF5-207ENST00000554465 TAF7LQ5H9L4 462 aa11.47□□□□□ -0.57
SRSF5-207ENST00000554465 PIK3R4Q99570 1358 aa11.47□□□□□ -0.57
SRSF5-207ENST00000554465 SCAF11Q99590 1463 aaKnown RBP11.47□□□□□ -0.57
SRSF5-207ENST00000554465 KIF3BO15066 747 aa11.47□□□□□ -0.57
SRSF5-207ENST00000554465 QRICH2Q9H0J4 1663 aa11.47□□□□□ -0.57
SRSF5-207ENST00000554465 MYOM1P52179 1685 aa11.46□□□□□ -0.57
SRSF5-207ENST00000554465 LRRC7Q96NW7 1537 aa11.46□□□□□ -0.57
SRSF5-207ENST00000554465 TULP1O00294 542 aaPredicted RBP11.46□□□□□ -0.58
SRSF5-207ENST00000554465 ALKQ9UM73 1620 aa11.46□□□□□ -0.58
SRSF5-207ENST00000554465 ZMYM3Q14202 1370 aa11.46□□□□□ -0.58
SRSF5-207ENST00000554465 TOPAZ1Q8N9V7 1692 aa11.45□□□□□ -0.58
SRSF5-207ENST00000554465 CHD2O14647 1828 aaKnown RBP11.45□□□□□ -0.58
SRSF5-207ENST00000554465 ANKRD26Q9UPS8 1709 aa11.45□□□□□ -0.58
SRSF5-207ENST00000554465 TRIM52Q96A61 297 aa11.45□□□□□ -0.58
SRSF5-207ENST00000554465 ROCK2O75116 1388 aaKnown RBP11.45□□□□□ -0.58
SRSF5-207ENST00000554465 ASXL1Q8IXJ9 1541 aa11.45□□□□□ -0.58
SRSF5-207ENST00000554465 FGD1P98174 961 aa11.44□□□□□ -0.58
SRSF5-207ENST00000554465 DDX10Q13206 875 aaKnown RBP11.44□□□□□ -0.58
SRSF5-207ENST00000554465 BCANQ96GW7 911 aa11.44□□□□□ -0.58
SRSF5-207ENST00000554465 TNRQ92752 1358 aa11.43□□□□□ -0.58
SRSF5-207ENST00000554465 FAM135BQ49AJ0 1406 aa11.43□□□□□ -0.58
SRSF5-207ENST00000554465 LMTK3Q96Q04 1460 aa11.43□□□□□ -0.58
SRSF5-207ENST00000554465 KTN1Q86UP2 1357 aaKnown RBP11.42□□□□□ -0.58
SRSF5-207ENST00000554465 ITSN1Q15811 1721 aa11.42□□□□□ -0.58
SRSF5-207ENST00000554465 PLEKHG1Q9ULL1 1385 aa11.42□□□□□ -0.58
SRSF5-207ENST00000554465 WASHC2CQ9Y4E1 1318 aa11.42□□□□□ -0.58
SRSF5-207ENST00000554465 EIF3AQ14152 1382 aaKnown RBP11.41□□□□□ -0.58
SRSF5-207ENST00000554465 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.41□□□□□ -0.58
SRSF5-207ENST00000554465 SALL2Q9Y467 1007 aaPredicted RBP11.4□□□□□ -0.58
SRSF5-207ENST00000554465 NCOA3Q9Y6Q9 1424 aa11.4□□□□□ -0.58
SRSF5-207ENST00000554465 NINLQ9Y2I6 1382 aa11.4□□□□□ -0.59
SRSF5-207ENST00000554465 PTCH1Q13635 1447 aa11.4□□□□□ -0.59
SRSF5-207ENST00000554465 INSRP06213 1382 aa11.39□□□□□ -0.59
SRSF5-207ENST00000554465 AKAP12Q02952 1782 aa11.39□□□□□ -0.59
SRSF5-207ENST00000554465 L3MBTL2Q969R5 705 aa11.38□□□□□ -0.59
SRSF5-207ENST00000554465 SUPT16HQ9Y5B9 1047 aaKnown RBP11.38□□□□□ -0.59
SRSF5-207ENST00000554465 PTPRMP28827 1452 aa11.37□□□□□ -0.59
SRSF5-207ENST00000554465 NPC1L1Q9UHC9 1359 aa11.37□□□□□ -0.59
SRSF5-207ENST00000554465 HDGFP51858 240 aaKnown RBP11.37□□□□□ -0.59
SRSF5-207ENST00000554465 RIMS2Q9UQ26 1411 aa11.36□□□□□ -0.59
SRSF5-207ENST00000554465 TMEM2Q9UHN6 1383 aa11.36□□□□□ -0.59
SRSF5-207ENST00000554465 C14orf93Q9H972 538 aaKnown RBP11.35□□□□□ -0.59
SRSF5-207ENST00000554465 WASHC2AQ641Q2 1341 aa11.35□□□□□ -0.59
SRSF5-207ENST00000554465 MON2Q7Z3U7 1717 aa11.35□□□□□ -0.59
SRSF5-207ENST00000554465 VGFO15240 615 aaPredicted RBP11.34□□□□□ -0.59
SRSF5-207ENST00000554465 NPM2Q86SE8 214 aaKnown RBP11.34□□□□□ -0.59
SRSF5-207ENST00000554465 CDC42BPGQ6DT37 1551 aa11.33□□□□□ -0.59
SRSF5-207ENST00000554465 ABCC11Q96J66 1382 aa11.33□□□□□ -0.6
SRSF5-207ENST00000554465 NKTRP30414 1462 aaKnown RBP11.33□□□□□ -0.6
SRSF5-207ENST00000554465 FMN2Q9NZ56 1722 aa11.33□□□□□ -0.6
SRSF5-207ENST00000554465 LRPPRCP42704 1394 aaKnown RBP11.33□□□□□ -0.6
SRSF5-207ENST00000554465 FBXO3Q9UK99 471 aa11.33□□□□□ -0.6
SRSF5-207ENST00000554465 NRKQ7Z2Y5 1582 aa11.32□□□□□ -0.6
SRSF5-207ENST00000554465 BRD4O60885 1362 aaPredicted RBP11.31□□□□□ -0.6
SRSF5-207ENST00000554465 ADAMTS13Q76LX8 1427 aa11.31□□□□□ -0.6
SRSF5-207ENST00000554465 GLIPR1L2Q4G1C9 344 aa11.31□□□□□ -0.6
SRSF5-207ENST00000554465 USP47Q96K76 1375 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms