RNA–Protein interactions for RNA: ENST00000554465.5

SRSF5-207, Transcript of serine and arginine rich splicing factor 5, humanhuman

TSL 1 (best)

Gene SRSF5, Length 3,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-207ENST00000554465 NISCHQ9Y2I1 1504 aa19.13■□□□□ 0.65
SRSF5-207ENST00000554465 CCDC180Q9P1Z9 1646 aa17.27■□□□□ 0.36
SRSF5-207ENST00000554465 DCAF1Q9Y4B6 1507 aa16.34■□□□□ 0.21
SRSF5-207ENST00000554465 MYO15BQ96JP2 1530 aa16.31■□□□□ 0.2
SRSF5-207ENST00000554465 ZCCHC6Q5VYS8 1495 aaKnown RBP16.14■□□□□ 0.17
SRSF5-207ENST00000554465 NACADO15069 1562 aa15.88■□□□□ 0.13
SRSF5-207ENST00000554465 RB1CC1Q8TDY2 1594 aa15.65■□□□□ 0.1
SRSF5-207ENST00000554465 SHROOM4Q9ULL8 1493 aa15.56■□□□□ 0.08
SRSF5-207ENST00000554465 UNC13AQ9UPW8 1703 aa15.38■□□□□ 0.05
SRSF5-207ENST00000554465 ABCC9O60706 1549 aa15.34■□□□□ 0.05
SRSF5-207ENST00000554465 BICRAQ9NZM4 1560 aa15.11■□□□□ 0.01
SRSF5-207ENST00000554465 SCRIBQ14160 1630 aa15.04■□□□□ -0
SRSF5-207ENST00000554465 PEG3Q9GZU2 1588 aa14.96□□□□□ -0.01
SRSF5-207ENST00000554465 BAZ1AQ9NRL2 1556 aaPredicted RBP14.86□□□□□ -0.03
SRSF5-207ENST00000554465 SMARCA4P51532 1647 aa14.79□□□□□ -0.04
SRSF5-207ENST00000554465 SMARCA2P51531 1590 aa14.75□□□□□ -0.05
SRSF5-207ENST00000554465 HMGXB3Q12766 1538 aa14.66□□□□□ -0.06
SRSF5-207ENST00000554465 MYT1Q01538 1121 aa14.63□□□□□ -0.07
SRSF5-207ENST00000554465 PELP1Q8IZL8 1130 aaKnown RBP14.6□□□□□ -0.07
SRSF5-207ENST00000554465 TOP2AP11388 1531 aaKnown RBP14.58□□□□□ -0.08
SRSF5-207ENST00000554465 RSF1Q96T23 1441 aaPredicted RBP14.57□□□□□ -0.08
SRSF5-207ENST00000554465 EIF4G1Q04637 1599 aaKnown RBP14.56□□□□□ -0.08
SRSF5-207ENST00000554465 MROH2BQ7Z745 1585 aa14.54□□□□□ -0.08
SRSF5-207ENST00000554465 DCAF8L2P0C7V8 631 aa14.5□□□□□ -0.09
SRSF5-207ENST00000554465 PRDM2Q13029 1718 aa14.5□□□□□ -0.09
SRSF5-207ENST00000554465 NCAPD3P42695 1498 aa14.5□□□□□ -0.09
SRSF5-207ENST00000554465 CECR2Q9BXF3 1484 aa14.46□□□□□ -0.09
SRSF5-207ENST00000554465 WIZO95785 1651 aa14.43□□□□□ -0.1
SRSF5-207ENST00000554465 ATAD2BQ9ULI0 1458 aa14.42□□□□□ -0.1
SRSF5-207ENST00000554465 CC2D2AQ9P2K1 1620 aa14.31□□□□□ -0.12
SRSF5-207ENST00000554465 TTBK1Q5TCY1 1321 aaPredicted RBP14.3□□□□□ -0.12
SRSF5-207ENST00000554465 BAZ1BQ9UIG0 1483 aaKnown RBP14.25□□□□□ -0.13
SRSF5-207ENST00000554465 LAMC3Q9Y6N6 1575 aa14.14□□□□□ -0.15
SRSF5-207ENST00000554465 CCDC88BA6NC98 1476 aa14.12□□□□□ -0.15
SRSF5-207ENST00000554465 PABPN1Q86U42 306 aaKnown RBP eCLIP14.09□□□□□ -0.155e-9■■■■□ 23.4
SRSF5-207ENST00000554465 CFTRP13569 1480 aa14.06□□□□□ -0.16
SRSF5-207ENST00000554465 BIVM-ERCC5R4GMW8 1640 aa14.06□□□□□ -0.16
SRSF5-207ENST00000554465 WDR97A6NE52 1622 aa14.01□□□□□ -0.17
SRSF5-207ENST00000554465 ABCC8Q09428 1581 aa13.93□□□□□ -0.18
SRSF5-207ENST00000554465 TOP2BQ02880 1626 aa13.92□□□□□ -0.18
SRSF5-207ENST00000554465 SUPT5HO00267 1087 aaKnown RBP13.92□□□□□ -0.18
SRSF5-207ENST00000554465 SLC24A1O60721 1099 aa13.9□□□□□ -0.18
SRSF5-207ENST00000554465 CADPSQ9ULU8 1353 aa13.87□□□□□ -0.19
SRSF5-207ENST00000554465 DNMBPQ6XZF7 1577 aa13.82□□□□□ -0.2
SRSF5-207ENST00000554465 EEA1Q15075 1411 aa13.8□□□□□ -0.2
SRSF5-207ENST00000554465 WDR62O43379 1518 aa13.75□□□□□ -0.21
SRSF5-207ENST00000554465 PDS5BQ9NTI5 1447 aa13.74□□□□□ -0.21
SRSF5-207ENST00000554465 KIF21AQ7Z4S6 1674 aa13.74□□□□□ -0.21
SRSF5-207ENST00000554465 THOC2Q8NI27 1593 aaKnown RBP13.72□□□□□ -0.21
SRSF5-207ENST00000554465 SYNJ1O43426 1573 aa13.71□□□□□ -0.21
SRSF5-207ENST00000554465 WRNQ14191 1432 aaPredicted RBP eCLIP13.68□□□□□ -0.22
SRSF5-207ENST00000554465 FANCD2Q9BXW9 1451 aa13.68□□□□□ -0.22
SRSF5-207ENST00000554465 CUX1P39880 1505 aa13.68□□□□□ -0.22
SRSF5-207ENST00000554465 CEP164Q9UPV0 1460 aa13.67□□□□□ -0.22
SRSF5-207ENST00000554465 KIF21BO75037 1637 aa13.65□□□□□ -0.22
SRSF5-207ENST00000554465 MRC2Q9UBG0 1479 aa13.63□□□□□ -0.23
SRSF5-207ENST00000554465 TARBP1Q13395 1621 aaKnown RBP13.62□□□□□ -0.23
SRSF5-207ENST00000554465 ABCA5Q8WWZ7 1642 aa13.61□□□□□ -0.23
SRSF5-207ENST00000554465 CUL7Q14999 1698 aa13.61□□□□□ -0.23
SRSF5-207ENST00000554465 ABCA10Q8WWZ4 1543 aa13.61□□□□□ -0.23
SRSF5-207ENST00000554465 ERICH3Q5RHP9 1530 aa13.6□□□□□ -0.23
SRSF5-207ENST00000554465 TOPBP1Q92547 1522 aa13.6□□□□□ -0.23
SRSF5-207ENST00000554465 CHIC1Q5VXU3 224 aa13.57□□□□□ -0.24
SRSF5-207ENST00000554465 URB2Q14146 1524 aaKnown RBP13.55□□□□□ -0.24
SRSF5-207ENST00000554465 ERICH6Q7L0X2 663 aa13.53□□□□□ -0.24
SRSF5-207ENST00000554465 APLP2Q06481 763 aa13.52□□□□□ -0.24
SRSF5-207ENST00000554465 PBRM1Q86U86 1689 aa13.5□□□□□ -0.25
SRSF5-207ENST00000554465 IFT140Q96RY7 1462 aa13.5□□□□□ -0.25
SRSF5-207ENST00000554465 CUX2O14529 1486 aa13.48□□□□□ -0.25
SRSF5-207ENST00000554465 NESP48681 1621 aa13.48□□□□□ -0.25
SRSF5-207ENST00000554465 POLA1P09884 1462 aaPredicted RBP13.46□□□□□ -0.25
SRSF5-207ENST00000554465 FGD5Q6ZNL6 1462 aa13.46□□□□□ -0.25
SRSF5-207ENST00000554465 PRKCSHP14314 528 aaPredicted RBP13.45□□□□□ -0.26
SRSF5-207ENST00000554465 PRXQ9BXM0 1461 aa13.42□□□□□ -0.26
SRSF5-207ENST00000554465 DNAJC5BQ9UF47 199 aa13.4□□□□□ -0.26
SRSF5-207ENST00000554465 KIF27Q86VH2 1401 aa13.4□□□□□ -0.27
SRSF5-207ENST00000554465 CTTNBP2Q8WZ74 1663 aa13.39□□□□□ -0.27
SRSF5-207ENST00000554465 ADAMTS12P58397 1594 aa13.37□□□□□ -0.27
SRSF5-207ENST00000554465 MAGI1Q96QZ7 1491 aaPredicted RBP13.32□□□□□ -0.28
SRSF5-207ENST00000554465 EIF4G3O43432 1585 aaKnown RBP13.32□□□□□ -0.28
SRSF5-207ENST00000554465 GOLGA3Q08378 1498 aa13.32□□□□□ -0.28
SRSF5-207ENST00000554465 SOGA1O94964 1423 aa13.29□□□□□ -0.28
SRSF5-207ENST00000554465 TRIM41Q8WV44 630 aa13.29□□□□□ -0.28
SRSF5-207ENST00000554465 GRIN2BQ13224 1484 aa13.28□□□□□ -0.28
SRSF5-207ENST00000554465 EFCAB5A4FU69 1503 aa13.27□□□□□ -0.28
SRSF5-207ENST00000554465 DAXXQ9UER7 740 aaPredicted RBP13.27□□□□□ -0.28
SRSF5-207ENST00000554465 TNIKQ9UKE5 1360 aa13.26□□□□□ -0.29
SRSF5-207ENST00000554465 ERCC6Q03468 1493 aa13.25□□□□□ -0.29
SRSF5-207ENST00000554465 GAPVD1Q14C86 1478 aa13.24□□□□□ -0.29
SRSF5-207ENST00000554465 RAPGEF2Q9Y4G8 1499 aa13.24□□□□□ -0.29
SRSF5-207ENST00000554465 SAMD9Q5K651 1589 aa13.24□□□□□ -0.29
SRSF5-207ENST00000554465 FHAD1B1AJZ9 1412 aa13.22□□□□□ -0.29
SRSF5-207ENST00000554465 IGF1RP08069 1367 aa13.21□□□□□ -0.29
SRSF5-207ENST00000554465 SHROOM2Q13796 1616 aa13.21□□□□□ -0.3
SRSF5-207ENST00000554465 MAP3K1Q13233 1512 aa13.19□□□□□ -0.3
SRSF5-207ENST00000554465 PCGF6Q9BYE7 350 aa13.19□□□□□ -0.3
SRSF5-207ENST00000554465 UGGT2Q9NYU1 1516 aa13.17□□□□□ -0.3
SRSF5-207ENST00000554465 LOC105371045A0A1W2PR82 267 aa13.16□□□□□ -0.3
SRSF5-207ENST00000554465 SYNJ2O15056 1496 aa13.16□□□□□ -0.3
SRSF5-207ENST00000554465 RUSC2Q8N2Y8 1516 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms