RNA–Protein interactions for RNA: ENST00000553578.5

RDH11-204, Transcript of retinol dehydrogenase 11, humanhuman

TSL 1 (best)

Gene RDH11, Length 4,035 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-204ENST00000553578 GCC2Q8IWJ2 1684 aa5.74□□□□□ -1.49
RDH11-204ENST00000553578 PDE4CQ08493 712 aa5.74□□□□□ -1.49
RDH11-204ENST00000553578 NCKAP5LQ9HCH0 1330 aa5.74□□□□□ -1.49
RDH11-204ENST00000553578 YTHDC1Q96MU7 727 aaKnown RBP5.74□□□□□ -1.49
RDH11-204ENST00000553578 A0A0U1RQG5 324 aaPredicted RBP5.74□□□□□ -1.49
RDH11-204ENST00000553578 SUPT6HQ7KZ85 1726 aaKnown RBP5.73□□□□□ -1.49
RDH11-204ENST00000553578 UPF1Q92900 1129 aaKnown RBP eCLIP5.73□□□□□ -1.492e-27■■■□□ 17.8
RDH11-204ENST00000553578 PPP1R1BQ9UD71 204 aaPredicted RBP5.73□□□□□ -1.49
RDH11-204ENST00000553578 CROCC2H7BZ55 1655 aa5.73□□□□□ -1.49
RDH11-204ENST00000553578 KIF3CO14782 793 aa5.73□□□□□ -1.49
RDH11-204ENST00000553578 CLSPNQ9HAW4 1339 aa5.73□□□□□ -1.49
RDH11-204ENST00000553578 RAPGEF6Q8TEU7 1601 aa5.73□□□□□ -1.49
RDH11-204ENST00000553578 KCTD17Q8N5Z5 321 aa5.72□□□□□ -1.49
RDH11-204ENST00000553578 KDM5BQ9UGL1 1544 aa5.72□□□□□ -1.49
RDH11-204ENST00000553578 E2F4Q16254 413 aa5.72□□□□□ -1.49
RDH11-204ENST00000553578 LMOD2Q6P5Q4 547 aa5.72□□□□□ -1.49
RDH11-204ENST00000553578 ZNF608Q9ULD9 1512 aaPredicted RBP5.72□□□□□ -1.49
RDH11-204ENST00000553578 MAP3K9P80192 1104 aa5.72□□□□□ -1.49
RDH11-204ENST00000553578 MFSD10Q14728 455 aa5.71□□□□□ -1.49
RDH11-204ENST00000553578 P3H3Q8IVL6 736 aa5.71□□□□□ -1.49
RDH11-204ENST00000553578 MAGI3Q5TCQ9 1506 aa5.71□□□□□ -1.5
RDH11-204ENST00000553578 UHRF1BP1LA0JNW5 1464 aa5.7□□□□□ -1.5
RDH11-204ENST00000553578 CHD1O14646 1710 aa5.7□□□□□ -1.5
RDH11-204ENST00000553578 ITSN2Q9NZM3 1697 aa5.7□□□□□ -1.5
RDH11-204ENST00000553578 ZSWIM6Q9HCJ5 1215 aa5.7□□□□□ -1.5
RDH11-204ENST00000553578 ARAP3Q8WWN8 1544 aa5.69□□□□□ -1.5
RDH11-204ENST00000553578 MIA2Q96PC5 1412 aa5.69□□□□□ -1.5
RDH11-204ENST00000553578 RSPH6AQ9H0K4 717 aa5.69□□□□□ -1.5
RDH11-204ENST00000553578 MAST1Q9Y2H9 1570 aa5.68□□□□□ -1.5
RDH11-204ENST00000553578 SLC34A2O95436 690 aa5.68□□□□□ -1.5
RDH11-204ENST00000553578 ADGBQ8N7X0 1667 aa5.68□□□□□ -1.5
RDH11-204ENST00000553578 EPRSP07814 1512 aaKnown RBP5.68□□□□□ -1.5
RDH11-204ENST00000553578 ARSIQ5FYB1 569 aa5.67□□□□□ -1.5
RDH11-204ENST00000553578 FBXW7Q969H0 707 aa5.67□□□□□ -1.5
RDH11-204ENST00000553578 PCDHGA4Q9Y5G9 962 aa5.67□□□□□ -1.5
RDH11-204ENST00000553578 DNMT1P26358 1616 aaKnown RBP5.67□□□□□ -1.5
RDH11-204ENST00000553578 HOXB3P14651 431 aaPredicted RBP5.67□□□□□ -1.5
RDH11-204ENST00000553578 EMP3P54852 163 aa5.67□□□□□ -1.5
RDH11-204ENST00000553578 NUP153P49790 1475 aaKnown RBP5.67□□□□□ -1.5
RDH11-204ENST00000553578 ARHGEF5Q12774 1597 aa5.66□□□□□ -1.5
RDH11-204ENST00000553578 GLIPR1L2Q4G1C9 344 aa5.66□□□□□ -1.5
RDH11-204ENST00000553578 PTCD2Q8WV60 388 aaKnown RBP5.66□□□□□ -1.5
RDH11-204ENST00000553578 SLC24A3Q9HC58 644 aa5.66□□□□□ -1.5
RDH11-204ENST00000553578 ADGRL2O95490 1459 aa5.66□□□□□ -1.5
RDH11-204ENST00000553578 ST18O60284 1047 aa5.66□□□□□ -1.5
RDH11-204ENST00000553578 KDM5DQ9BY66 1539 aa5.66□□□□□ -1.5
RDH11-204ENST00000553578 DPYSL4O14531 572 aa5.65□□□□□ -1.5
RDH11-204ENST00000553578 PTPN23Q9H3S7 1636 aa5.65□□□□□ -1.5
RDH11-204ENST00000553578 BCORL1Q5H9F3 1711 aa5.65□□□□□ -1.5
RDH11-204ENST00000553578 ABCC10Q5T3U5 1492 aa5.65□□□□□ -1.5
RDH11-204ENST00000553578 SHANK2Q9UPX8 1470 aa5.65□□□□□ -1.5
RDH11-204ENST00000553578 NUDT7P0C024 238 aa5.65□□□□□ -1.5
RDH11-204ENST00000553578 ERBB3P21860 1342 aa5.65□□□□□ -1.51
RDH11-204ENST00000553578 PPM1GO15355 546 aaPredicted RBP5.65□□□□□ -1.51
RDH11-204ENST00000553578 HOXB1P14653 301 aaPredicted RBP5.65□□□□□ -1.51
RDH11-204ENST00000553578 ERICH6BQ5W0A0 696 aa5.65□□□□□ -1.51
RDH11-204ENST00000553578 OXER1Q8TDS5 423 aa5.65□□□□□ -1.51
RDH11-204ENST00000553578 CDC42BPAQ5VT25 1732 aa5.65□□□□□ -1.51
RDH11-204ENST00000553578 TDRD9Q8NDG6 1382 aaKnown RBP5.65□□□□□ -1.51
RDH11-204ENST00000553578 DEKP35659 375 aaKnown RBP5.64□□□□□ -1.51
RDH11-204ENST00000553578 MARVELD3Q96A59 401 aa5.64□□□□□ -1.51
RDH11-204ENST00000553578 FOXD4L5Q5VV16 416 aaPredicted RBP5.64□□□□□ -1.51
RDH11-204ENST00000553578 FOXD4L4Q8WXT5 416 aaPredicted RBP5.64□□□□□ -1.51
RDH11-204ENST00000553578 PREX2Q70Z35 1606 aa5.64□□□□□ -1.51
RDH11-204ENST00000553578 ARID4BQ4LE39 1312 aaPredicted RBP5.64□□□□□ -1.51
RDH11-204ENST00000553578 CAMK2BQ13554 666 aa5.64□□□□□ -1.51
RDH11-204ENST00000553578 HMGB1P09429 215 aaKnown RBP5.64□□□□□ -1.51
RDH11-204ENST00000553578 EMILIN3Q9NT22 766 aa5.64□□□□□ -1.51
RDH11-204ENST00000553578 ROCK1Q13464 1354 aa5.63□□□□□ -1.51
RDH11-204ENST00000553578 SPDYE16A6NNV3 312 aaPredicted RBP5.63□□□□□ -1.51
RDH11-204ENST00000553578 ARHGEF1Q92888 912 aaKnown RBP5.63□□□□□ -1.51
RDH11-204ENST00000553578 MAPKBP1O60336 1514 aa5.63□□□□□ -1.51
RDH11-204ENST00000553578 EVI5O60447 810 aa5.63□□□□□ -1.51
RDH11-204ENST00000553578 HFM1A2PYH4 1435 aa5.63□□□□□ -1.51
RDH11-204ENST00000553578 MYOM3Q5VTT5 1437 aa5.63□□□□□ -1.51
RDH11-204ENST00000553578 NEURL4Q96JN8 1562 aa5.63□□□□□ -1.51
RDH11-204ENST00000553578 CCNB3Q8WWL7 1395 aa5.63□□□□□ -1.51
RDH11-204ENST00000553578 ERCC6Q03468 1493 aa5.63□□□□□ -1.51
RDH11-204ENST00000553578 KCNV2Q8TDN2 545 aa5.63□□□□□ -1.51
RDH11-204ENST00000553578 FGD6Q6ZV73 1430 aa5.62□□□□□ -1.51
RDH11-204ENST00000553578 PSDA5PKW4 1024 aaPredicted RBP5.62□□□□□ -1.51
RDH11-204ENST00000553578 GPR153Q6NV75 609 aa5.62□□□□□ -1.51
RDH11-204ENST00000553578 ZNF526Q8TF50 670 aaPredicted RBP5.62□□□□□ -1.51
RDH11-204ENST00000553578 KHSRPQ92945 711 aaKnown RBP eCLIP5.62□□□□□ -1.51
RDH11-204ENST00000553578 KCNH8Q96L42 1107 aa5.62□□□□□ -1.51
RDH11-204ENST00000553578 FAM205CA6NFA0 338 aa5.62□□□□□ -1.51
RDH11-204ENST00000553578 GPBP1L1Q9HC44 474 aaPredicted RBP5.62□□□□□ -1.51
RDH11-204ENST00000553578 NCOA2Q15596 1464 aa5.62□□□□□ -1.51
RDH11-204ENST00000553578 FHOD3Q2V2M9 1422 aa5.62□□□□□ -1.51
RDH11-204ENST00000553578 TMCO4Q5TGY1 634 aa5.62□□□□□ -1.51
RDH11-204ENST00000553578 DIEXFQ68CQ4 756 aaKnown RBP5.62□□□□□ -1.51
RDH11-204ENST00000553578 PLXNC1O60486 1568 aa5.62□□□□□ -1.51
RDH11-204ENST00000553578 PHLDB1Q86UU1 1377 aa5.61□□□□□ -1.51
RDH11-204ENST00000553578 WDR7Q9Y4E6 1490 aa5.61□□□□□ -1.51
RDH11-204ENST00000553578 CDC42BPBQ9Y5S2 1711 aa5.61□□□□□ -1.51
RDH11-204ENST00000553578 BRPF1P55201 1214 aaPredicted RBP5.61□□□□□ -1.51
RDH11-204ENST00000553578 ABCC2Q92887 1545 aa5.61□□□□□ -1.51
RDH11-204ENST00000553578 ZNF454Q8N9F8 522 aa5.6□□□□□ -1.51
RDH11-204ENST00000553578 CCDC97Q96F63 343 aaPredicted RBP5.6□□□□□ -1.51
RDH11-204ENST00000553578 MAGI2Q86UL8 1455 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms