RNA–Protein interactions for RNA: ENST00000548979.1

SLC38A1-205, Transcript of solute carrier family 38 member 1, humanhuman

TSL 4

Gene SLC38A1, Length 543 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-205ENST00000548979 ZDHHC16Q969W1 377 aa13.79□□□□□ -0.2
SLC38A1-205ENST00000548979 PHF14O94880 888 aa13.78□□□□□ -0.2
SLC38A1-205ENST00000548979 DMRTA1Q5VZB9 504 aa13.78□□□□□ -0.2
SLC38A1-205ENST00000548979 GRXCR2A6NFK2 248 aa13.77□□□□□ -0.21
SLC38A1-205ENST00000548979 MLLT3P42568 568 aaPredicted RBP13.77□□□□□ -0.21
SLC38A1-205ENST00000548979 P3H3Q8IVL6 736 aa13.77□□□□□ -0.21
SLC38A1-205ENST00000548979 CTTNBP2Q8WZ74 1663 aa13.77□□□□□ -0.21
SLC38A1-205ENST00000548979 KIAA0556O60303 1618 aa13.76□□□□□ -0.21
SLC38A1-205ENST00000548979 PLB1Q6P1J6 1458 aa13.76□□□□□ -0.21
SLC38A1-205ENST00000548979 ARHGAP33O14559 1287 aa13.76□□□□□ -0.21
SLC38A1-205ENST00000548979 KCNK17Q96T54 332 aa13.76□□□□□ -0.21
SLC38A1-205ENST00000548979 BCL2L12Q9HB09 334 aa13.75□□□□□ -0.21
SLC38A1-205ENST00000548979 SEMA3EO15041 775 aa13.74□□□□□ -0.21
SLC38A1-205ENST00000548979 NBR1Q14596 966 aa13.74□□□□□ -0.21
SLC38A1-205ENST00000548979 TYW1BQ6NUM6 668 aa13.74□□□□□ -0.21
SLC38A1-205ENST00000548979 RBM33Q96EV2 1170 aaKnown RBP13.74□□□□□ -0.21
SLC38A1-205ENST00000548979 PBX2P40425 430 aa13.73□□□□□ -0.21
SLC38A1-205ENST00000548979 LSM11P83369 360 aaKnown RBP eCLIP13.73□□□□□ -0.21
SLC38A1-205ENST00000548979 ANKRD13DQ6ZTN6 518 aa13.73□□□□□ -0.21
SLC38A1-205ENST00000548979 KIF13AQ9H1H9 1805 aa13.73□□□□□ -0.21
SLC38A1-205ENST00000548979 KDM5BQ9UGL1 1544 aa13.72□□□□□ -0.21
SLC38A1-205ENST00000548979 ASXL2Q76L83 1435 aa13.72□□□□□ -0.21
SLC38A1-205ENST00000548979 DIP2BQ9P265 1576 aa13.71□□□□□ -0.21
SLC38A1-205ENST00000548979 OSBPP22059 807 aa13.71□□□□□ -0.21
SLC38A1-205ENST00000548979 EPAS1Q99814 870 aa13.7□□□□□ -0.22
SLC38A1-205ENST00000548979 COL9A1P20849 921 aa13.69□□□□□ -0.22
SLC38A1-205ENST00000548979 TSR1Q2NL82 804 aaKnown RBP13.69□□□□□ -0.22
SLC38A1-205ENST00000548979 PTPREP23469 700 aa13.68□□□□□ -0.22
SLC38A1-205ENST00000548979 FBXW7Q969H0 707 aa13.68□□□□□ -0.22
SLC38A1-205ENST00000548979 EN1Q05925 392 aaPredicted RBP13.67□□□□□ -0.22
SLC38A1-205ENST00000548979 C6orf132Q5T0Z8 1188 aa13.67□□□□□ -0.22
SLC38A1-205ENST00000548979 GLI2P10070 1586 aa13.66□□□□□ -0.22
SLC38A1-205ENST00000548979 ABCA8O94911 1581 aa13.65□□□□□ -0.22
SLC38A1-205ENST00000548979 KIF21BO75037 1637 aa13.64□□□□□ -0.23
SLC38A1-205ENST00000548979 MAP3K7O43318 606 aa13.64□□□□□ -0.23
SLC38A1-205ENST00000548979 UBTFP17480 764 aaKnown RBP13.63□□□□□ -0.23
SLC38A1-205ENST00000548979 ZCCHC11Q5TAX3 1644 aaKnown RBP13.63□□□□□ -0.23
SLC38A1-205ENST00000548979 EPRSP07814 1512 aaKnown RBP13.63□□□□□ -0.23
SLC38A1-205ENST00000548979 WDR7Q9Y4E6 1490 aa13.62□□□□□ -0.23
SLC38A1-205ENST00000548979 ADGRD1Q6QNK2 874 aa13.62□□□□□ -0.23
SLC38A1-205ENST00000548979 CDHR5Q9HBB8 845 aa13.62□□□□□ -0.23
SLC38A1-205ENST00000548979 TESPA1A2RU30 521 aaPredicted RBP13.61□□□□□ -0.23
SLC38A1-205ENST00000548979 ZBED2Q9BTP6 218 aa13.61□□□□□ -0.23
SLC38A1-205ENST00000548979 SAMD9Q5K651 1589 aa13.61□□□□□ -0.23
SLC38A1-205ENST00000548979 TEX14Q8IWB6 1497 aa13.6□□□□□ -0.23
SLC38A1-205ENST00000548979 RANGAP1P46060 587 aaPredicted RBP13.59□□□□□ -0.23
SLC38A1-205ENST00000548979 PROX2Q3B8N5 592 aa13.59□□□□□ -0.23
SLC38A1-205ENST00000548979 VPS9D1Q9Y2B5 631 aa13.59□□□□□ -0.23
SLC38A1-205ENST00000548979 PPP1R3GB7ZBB8 358 aa13.58□□□□□ -0.24
SLC38A1-205ENST00000548979 KCNH8Q96L42 1107 aa13.58□□□□□ -0.24
SLC38A1-205ENST00000548979 EFCAB5A4FU69 1503 aa13.58□□□□□ -0.24
SLC38A1-205ENST00000548979 KDM6BO15054 1643 aa13.57□□□□□ -0.24
SLC38A1-205ENST00000548979 TSPOAP1O95153 1857 aa13.57□□□□□ -0.24
SLC38A1-205ENST00000548979 HRO43593 1189 aa13.57□□□□□ -0.24
SLC38A1-205ENST00000548979 ATP10BO94823 1461 aa13.56□□□□□ -0.24
SLC38A1-205ENST00000548979 TK2O00142 265 aa13.56□□□□□ -0.24
SLC38A1-205ENST00000548979 SLC24A1O60721 1099 aa13.56□□□□□ -0.24
SLC38A1-205ENST00000548979 CD109Q6YHK3 1445 aa13.55□□□□□ -0.24
SLC38A1-205ENST00000548979 FHOD3Q2V2M9 1422 aa13.54□□□□□ -0.24
SLC38A1-205ENST00000548979 RAPGEF6Q8TEU7 1601 aa13.53□□□□□ -0.24
SLC38A1-205ENST00000548979 MAP3K4Q9Y6R4 1608 aa13.53□□□□□ -0.24
SLC38A1-205ENST00000548979 PLEKHD1A6NEE1 506 aa13.53□□□□□ -0.24
SLC38A1-205ENST00000548979 RBM26Q5T8P6 1007 aaKnown RBP13.53□□□□□ -0.24
SLC38A1-205ENST00000548979 SLC4A5Q9BY07 1137 aa13.53□□□□□ -0.24
SLC38A1-205ENST00000548979 NPDC1Q9NQX5 325 aaPredicted RBP13.53□□□□□ -0.24
SLC38A1-205ENST00000548979 ARID3CA6NKF2 412 aa13.52□□□□□ -0.25
SLC38A1-205ENST00000548979 MAGI3Q5TCQ9 1506 aa13.52□□□□□ -0.25
SLC38A1-205ENST00000548979 PHLDB1Q86UU1 1377 aa13.51□□□□□ -0.25
SLC38A1-205ENST00000548979 FMN1Q68DA7 1419 aa13.5□□□□□ -0.25
SLC38A1-205ENST00000548979 BHMG1C9JSJ3 638 aaPredicted RBP13.5□□□□□ -0.25
SLC38A1-205ENST00000548979 FAM198AQ9UFP1 575 aa13.5□□□□□ -0.25
SLC38A1-205ENST00000548979 CFAP43Q8NDM7 1665 aa13.5□□□□□ -0.25
SLC38A1-205ENST00000548979 PPRC1Q5VV67 1664 aaKnown RBP13.49□□□□□ -0.25
SLC38A1-205ENST00000548979 NUP153P49790 1475 aaKnown RBP13.48□□□□□ -0.25
SLC38A1-205ENST00000548979 TSKSQ9UJT2 592 aa13.48□□□□□ -0.25
SLC38A1-205ENST00000548979 MYT1LQ9UL68 1186 aa13.48□□□□□ -0.25
SLC38A1-205ENST00000548979 C3orf80F5H4A9 247 aa13.47□□□□□ -0.25
SLC38A1-205ENST00000548979 KIAA1468Q9P260 1216 aa13.47□□□□□ -0.25
SLC38A1-205ENST00000548979 CDK11AQ9UQ88 783 aaPredicted RBP13.47□□□□□ -0.25
SLC38A1-205ENST00000548979 NUTM2FA1L443 756 aa13.45□□□□□ -0.26
SLC38A1-205ENST00000548979 TRIM6-TRIM34B2RNG4 842 aa13.45□□□□□ -0.26
SLC38A1-205ENST00000548979 CDCA7LQ96GN5 454 aa13.45□□□□□ -0.26
SLC38A1-205ENST00000548979 PRSS12P56730 875 aa13.44□□□□□ -0.26
SLC38A1-205ENST00000548979 ATP1B4Q9UN42 357 aaPredicted RBP13.44□□□□□ -0.26
SLC38A1-205ENST00000548979 ARHGAP35Q9NRY4 1499 aa13.43□□□□□ -0.26
SLC38A1-205ENST00000548979 COL17A1Q9UMD9 1497 aaPredicted RBP13.43□□□□□ -0.26
SLC38A1-205ENST00000548979 PTGDRQ13258 359 aa13.43□□□□□ -0.26
SLC38A1-205ENST00000548979 RABGEF1Q9UJ41 708 aa13.43□□□□□ -0.26
SLC38A1-205ENST00000548979 ABCA9Q8IUA7 1624 aa13.42□□□□□ -0.26
SLC38A1-205ENST00000548979 ARAP3Q8WWN8 1544 aa13.41□□□□□ -0.26
SLC38A1-205ENST00000548979 RNF166Q96A37 237 aaPredicted RBP13.41□□□□□ -0.26
SLC38A1-205ENST00000548979 SMYD5Q6GMV2 418 aa13.4□□□□□ -0.26
SLC38A1-205ENST00000548979 SEPT9Q9UHD8 586 aaPredicted RBP13.4□□□□□ -0.26
SLC38A1-205ENST00000548979 NEO1Q92859 1461 aa13.4□□□□□ -0.26
SLC38A1-205ENST00000548979 SMAPO00193 183 aa13.39□□□□□ -0.27
SLC38A1-205ENST00000548979 PADI6Q6TGC4 694 aa13.39□□□□□ -0.27
SLC38A1-205ENST00000548979 CERKQ8TCT0 537 aa13.39□□□□□ -0.27
SLC38A1-205ENST00000548979 GPR37O15354 613 aa13.38□□□□□ -0.27
SLC38A1-205ENST00000548979 HECW1Q76N89 1606 aa13.38□□□□□ -0.27
SLC38A1-205ENST00000548979 ONECUT3O60422 494 aaPredicted RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms