RNA–Protein interactions for RNA: ENST00000547555.5

LETMD1-210, Transcript of LETM1 domain containing 1, humanhuman

TSL 5

Gene LETMD1, Length 1,658 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-210ENST00000547555 SLC52A1Q9NWF4 448 aa23.45■■□□□ 1.34
LETMD1-210ENST00000547555 A2ML1A8K2U0 1454 aa23.44■■□□□ 1.34
LETMD1-210ENST00000547555 KIF1BO60333 1816 aa23.43■■□□□ 1.34
LETMD1-210ENST00000547555 CCDC144AA2RUR9 1427 aa23.43■■□□□ 1.34
LETMD1-210ENST00000547555 UHRF1BP1Q6BDS2 1440 aa23.43■■□□□ 1.34
LETMD1-210ENST00000547555 UBR1Q8IWV7 1749 aa23.43■■□□□ 1.34
LETMD1-210ENST00000547555 ADGRB3O60242 1522 aa23.42■■□□□ 1.34
LETMD1-210ENST00000547555 IDI1Q13907 227 aa23.41■■□□□ 1.34
LETMD1-210ENST00000547555 TMEM131LA2VDJ0 1609 aa23.41■■□□□ 1.34
LETMD1-210ENST00000547555 MYO5BQ9ULV0 1848 aa23.4■■□□□ 1.34
LETMD1-210ENST00000547555 NEURL4Q96JN8 1562 aa23.4■■□□□ 1.34
LETMD1-210ENST00000547555 LMTK3Q96Q04 1460 aa23.38■■□□□ 1.33
LETMD1-210ENST00000547555 PPP4R2Q9NY27 417 aa23.37■■□□□ 1.33
LETMD1-210ENST00000547555 SPATA31E1Q6ZUB1 1445 aa23.34■■□□□ 1.33
LETMD1-210ENST00000547555 POLR1AO95602 1720 aaPredicted RBP23.32■■□□□ 1.32
LETMD1-210ENST00000547555 SLIT1O75093 1534 aa23.3■■□□□ 1.32
LETMD1-210ENST00000547555 ARHGAP23Q9P227 1491 aa23.29■■□□□ 1.32
LETMD1-210ENST00000547555 IFT172Q9UG01 1749 aa23.28■■□□□ 1.32
LETMD1-210ENST00000547555 ERICH6Q7L0X2 663 aa23.28■■□□□ 1.32
LETMD1-210ENST00000547555 THEMISQ8N1K5 641 aaPredicted RBP23.26■■□□□ 1.31
LETMD1-210ENST00000547555 STAG3Q9UJ98 1225 aa23.26■■□□□ 1.31
LETMD1-210ENST00000547555 PPLO60437 1756 aa23.26■■□□□ 1.31
LETMD1-210ENST00000547555 HNRNPUQ00839 825 aaKnown RBP eCLIP23.25■■□□□ 1.31
LETMD1-210ENST00000547555 NEXMIFQ5QGS0 1516 aa23.25■■□□□ 1.31
LETMD1-210ENST00000547555 TMEM2Q9UHN6 1383 aa23.25■■□□□ 1.31
LETMD1-210ENST00000547555 MSH5O43196 834 aa23.25■■□□□ 1.31
LETMD1-210ENST00000547555 CHGAP10645 457 aaKnown RBP23.25■■□□□ 1.31
LETMD1-210ENST00000547555 AEBP2Q6ZN18 517 aaPredicted RBP23.25■■□□□ 1.31
LETMD1-210ENST00000547555 ZFYVE9O95405 1425 aa23.24■■□□□ 1.31
LETMD1-210ENST00000547555 ZBED9Q6R2W3 1325 aa23.23■■□□□ 1.31
LETMD1-210ENST00000547555 EIF4G2P78344 907 aaKnown RBP eCLIP23.22■■□□□ 1.31
LETMD1-210ENST00000547555 RIMS2Q9UQ26 1411 aa23.2■■□□□ 1.31
LETMD1-210ENST00000547555 RPGRIP1LQ68CZ1 1315 aa23.19■■□□□ 1.3
LETMD1-210ENST00000547555 STRCQ7RTU9 1775 aa23.18■■□□□ 1.3
LETMD1-210ENST00000547555 HSPA2P54652 639 aa23.18■■□□□ 1.3
LETMD1-210ENST00000547555 SCAF11Q99590 1463 aaKnown RBP23.17■■□□□ 1.3
LETMD1-210ENST00000547555 ZNF326Q5BKZ1 582 aaKnown RBP23.17■■□□□ 1.3
LETMD1-210ENST00000547555 RGL3Q3MIN7 710 aa23.16■■□□□ 1.3
LETMD1-210ENST00000547555 MYOM2P54296 1465 aa23.16■■□□□ 1.3
LETMD1-210ENST00000547555 WASHC2AQ641Q2 1341 aa23.16■■□□□ 1.3
LETMD1-210ENST00000547555 MED14O60244 1454 aa23.13■■□□□ 1.29
LETMD1-210ENST00000547555 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.13■■□□□ 1.29
LETMD1-210ENST00000547555 LTKP29376 864 aa23.13■■□□□ 1.29
LETMD1-210ENST00000547555 HDGFP51858 240 aaKnown RBP23.12■■□□□ 1.29
LETMD1-210ENST00000547555 ANKLE2Q86XL3 938 aa23.12■■□□□ 1.29
LETMD1-210ENST00000547555 NRXN1Q9ULB1 1477 aa23.11■■□□□ 1.29
LETMD1-210ENST00000547555 HSPA5P11021 654 aaKnown RBP23.11■■□□□ 1.29
LETMD1-210ENST00000547555 EID1Q9Y6B2 187 aa23.11■■□□□ 1.29
LETMD1-210ENST00000547555 TXNDC2Q86VQ3 553 aa23.1■■□□□ 1.29
LETMD1-210ENST00000547555 CCDC7Q96M83 1385 aa23.1■■□□□ 1.29
LETMD1-210ENST00000547555 IQGAP1P46940 1657 aa23.1■■□□□ 1.29
LETMD1-210ENST00000547555 PLEKHG1Q9ULL1 1385 aa23.09■■□□□ 1.29
LETMD1-210ENST00000547555 L3MBTL2Q969R5 705 aa23.09■■□□□ 1.29
LETMD1-210ENST00000547555 STAC3Q96MF2 364 aa23.09■■□□□ 1.29
LETMD1-210ENST00000547555 PRKRIP1Q9H875 184 aaPredicted RBP23.09■■□□□ 1.29
LETMD1-210ENST00000547555 NRXN3Q9Y4C0 1643 aa23.09■■□□□ 1.29
LETMD1-210ENST00000547555 SETBP1Q9Y6X0 1596 aa23.09■■□□□ 1.29
LETMD1-210ENST00000547555 VGFO15240 615 aaPredicted RBP23.08■■□□□ 1.29
LETMD1-210ENST00000547555 HIRIP3Q9BW71 556 aaPredicted RBP23.08■■□□□ 1.29
LETMD1-210ENST00000547555 DCAF11Q8TEB1 546 aa23.07■■□□□ 1.28
LETMD1-210ENST00000547555 NPHP4O75161 1426 aaPredicted RBP23.06■■□□□ 1.28
LETMD1-210ENST00000547555 PIK3C2GO75747 1445 aa23.06■■□□□ 1.28
LETMD1-210ENST00000547555 SMG6Q86US8 1419 aaKnown RBP23.06■■□□□ 1.28
LETMD1-210ENST00000547555 NCKAP5LQ9HCH0 1330 aa23.06■■□□□ 1.28
LETMD1-210ENST00000547555 NUTM2DQ5VT03 806 aaPredicted RBP23.06■■□□□ 1.28
LETMD1-210ENST00000547555 ADGRF5Q8IZF2 1346 aa23.05■■□□□ 1.28
LETMD1-210ENST00000547555 SETD1AO15047 1707 aaKnown RBP23.05■■□□□ 1.28
LETMD1-210ENST00000547555 RNF123Q5XPI4 1314 aa23.04■■□□□ 1.28
LETMD1-210ENST00000547555 DIP2AQ14689 1571 aa23.03■■□□□ 1.28
LETMD1-210ENST00000547555 LAMC1P11047 1609 aa23.03■■□□□ 1.28
LETMD1-210ENST00000547555 ADAMTS13Q76LX8 1427 aa23.02■■□□□ 1.28
LETMD1-210ENST00000547555 PRAG1Q86YV5 1406 aa23.02■■□□□ 1.28
LETMD1-210ENST00000547555 KIAA1210Q9ULL0 1709 aa23.01■■□□□ 1.27
LETMD1-210ENST00000547555 KDM2AQ9Y2K7 1162 aa23■■□□□ 1.27
LETMD1-210ENST00000547555 ALKQ9UM73 1620 aa22.99■■□□□ 1.27
LETMD1-210ENST00000547555 TRPM1Q7Z4N2 1603 aa22.96■■□□□ 1.27
LETMD1-210ENST00000547555 NOP58Q9Y2X3 529 aaKnown RBP22.95■■□□□ 1.26
LETMD1-210ENST00000547555 DMRT2Q9Y5R5 561 aa22.94■■□□□ 1.26
LETMD1-210ENST00000547555 KTN1Q86UP2 1357 aaKnown RBP22.94■■□□□ 1.26
LETMD1-210ENST00000547555 ASXL1Q8IXJ9 1541 aa22.94■■□□□ 1.26
LETMD1-210ENST00000547555 MRS2Q9HD23 443 aa22.93■■□□□ 1.26
LETMD1-210ENST00000547555 TBX22Q9Y458 520 aa22.93■■□□□ 1.26
LETMD1-210ENST00000547555 ROCK2O75116 1388 aaKnown RBP22.93■■□□□ 1.26
LETMD1-210ENST00000547555 C14orf93Q9H972 538 aaKnown RBP22.92■■□□□ 1.26
LETMD1-210ENST00000547555 NBPF8Q3BBV2 869 aa22.91■■□□□ 1.26
LETMD1-210ENST00000547555 SLC26A8Q96RN1 970 aa22.91■■□□□ 1.26
LETMD1-210ENST00000547555 ADGRB1O14514 1584 aa22.91■■□□□ 1.26
LETMD1-210ENST00000547555 CHD2O14647 1828 aaKnown RBP22.91■■□□□ 1.26
LETMD1-210ENST00000547555 PIK3R4Q99570 1358 aa22.9■■□□□ 1.26
LETMD1-210ENST00000547555 SENP3Q9H4L4 574 aaPredicted RBP22.9■■□□□ 1.26
LETMD1-210ENST00000547555 RALGAPBQ86X10 1494 aa22.89■■□□□ 1.26
LETMD1-210ENST00000547555 CFAP70Q5T0N1 1121 aa22.89■■□□□ 1.25
LETMD1-210ENST00000547555 NWD1Q149M9 1564 aa22.89■■□□□ 1.25
LETMD1-210ENST00000547555 METP08581 1390 aa22.88■■□□□ 1.25
LETMD1-210ENST00000547555 NUDCQ9Y266 331 aa22.88■■□□□ 1.25
LETMD1-210ENST00000547555 XRN1Q8IZH2 1706 aaKnown RBP22.88■■□□□ 1.25
LETMD1-210ENST00000547555 KNDC1Q76NI1 1749 aa22.86■■□□□ 1.25
LETMD1-210ENST00000547555 STRCP1A6NGW2 1772 aa22.86■■□□□ 1.25
LETMD1-210ENST00000547555 DEKP35659 375 aaKnown RBP22.85■■□□□ 1.25
LETMD1-210ENST00000547555 ANP32AP39687 249 aaKnown RBP22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 128 ms