RNA–Protein interactions for RNA: ENST00000545894.1

DDB1-224, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 2,282 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-224ENST00000545894 PTPRMP28827 1452 aa15.57■□□□□ 0.08
DDB1-224ENST00000545894 SMG6Q86US8 1419 aaKnown RBP15.55■□□□□ 0.08
DDB1-224ENST00000545894 C3P01024 1663 aa15.55■□□□□ 0.08
DDB1-224ENST00000545894 PLA2R1Q13018 1463 aa15.54■□□□□ 0.08
DDB1-224ENST00000545894 ERVK-7P63135 1459 aa15.53■□□□□ 0.08
DDB1-224ENST00000545894 PTPRTO14522 1441 aa15.53■□□□□ 0.08
DDB1-224ENST00000545894 NOS1P29475 1434 aa15.52■□□□□ 0.08
DDB1-224ENST00000545894 USP47Q96K76 1375 aa15.51■□□□□ 0.07
DDB1-224ENST00000545894 SPATA31D1Q6ZQQ2 1576 aa15.51■□□□□ 0.07
DDB1-224ENST00000545894 PREX1Q8TCU6 1659 aa15.51■□□□□ 0.07
DDB1-224ENST00000545894 NUDCQ9Y266 331 aa15.5■□□□□ 0.07
DDB1-224ENST00000545894 TNRQ92752 1358 aa15.49■□□□□ 0.07
DDB1-224ENST00000545894 SYNMO15061 1565 aa15.49■□□□□ 0.07
DDB1-224ENST00000545894 RNF123Q5XPI4 1314 aa15.48■□□□□ 0.07
DDB1-224ENST00000545894 CFAP65Q6ZU64 1925 aaKnown RBP15.48■□□□□ 0.07
DDB1-224ENST00000545894 IDI1Q13907 227 aa15.47■□□□□ 0.07
DDB1-224ENST00000545894 TRPM2O94759 1503 aa15.47■□□□□ 0.07
DDB1-224ENST00000545894 SPHKAPQ2M3C7 1700 aa15.47■□□□□ 0.07
DDB1-224ENST00000545894 UGGT1Q9NYU2 1555 aa15.47■□□□□ 0.07
DDB1-224ENST00000545894 POLR3GLQ9BT43 218 aa15.45■□□□□ 0.06
DDB1-224ENST00000545894 SLC52A1Q9NWF4 448 aa15.45■□□□□ 0.06
DDB1-224ENST00000545894 ROCK2O75116 1388 aaKnown RBP15.45■□□□□ 0.06
DDB1-224ENST00000545894 ZNF326Q5BKZ1 582 aaKnown RBP15.45■□□□□ 0.06
DDB1-224ENST00000545894 CCDC144AA2RUR9 1427 aa15.44■□□□□ 0.06
DDB1-224ENST00000545894 CLTCL1P53675 1640 aa15.44■□□□□ 0.06
DDB1-224ENST00000545894 UHRF1BP1Q6BDS2 1440 aa15.43■□□□□ 0.06
DDB1-224ENST00000545894 CNGB1Q14028 1251 aaPredicted RBP15.42■□□□□ 0.06
DDB1-224ENST00000545894 CCDC136Q96JN2 1154 aa15.42■□□□□ 0.06
DDB1-224ENST00000545894 PIK3C2BO00750 1634 aa15.42■□□□□ 0.06
DDB1-224ENST00000545894 PNISRQ8TF01 805 aaKnown RBP15.42■□□□□ 0.06
DDB1-224ENST00000545894 NOP58Q9Y2X3 529 aaKnown RBP15.42■□□□□ 0.06
DDB1-224ENST00000545894 RALGAPBQ86X10 1494 aa15.42■□□□□ 0.06
DDB1-224ENST00000545894 NLRP1Q9C000 1473 aa15.41■□□□□ 0.06
DDB1-224ENST00000545894 CHGAP10645 457 aaKnown RBP15.4■□□□□ 0.06
DDB1-224ENST00000545894 TMC1Q8TDI8 760 aa15.4■□□□□ 0.06
DDB1-224ENST00000545894 MYO3AQ8NEV4 1616 aa15.39■□□□□ 0.06
DDB1-224ENST00000545894 A2ML1A8K2U0 1454 aa15.38■□□□□ 0.05
DDB1-224ENST00000545894 CARD11Q9BXL7 1154 aa15.37■□□□□ 0.05
DDB1-224ENST00000545894 STAG3Q9UJ98 1225 aa15.37■□□□□ 0.05
DDB1-224ENST00000545894 RGL3Q3MIN7 710 aa15.37■□□□□ 0.05
DDB1-224ENST00000545894 CEP170BQ9Y4F5 1589 aaPredicted RBP15.36■□□□□ 0.05
DDB1-224ENST00000545894 LRPPRCP42704 1394 aaKnown RBP15.36■□□□□ 0.05
DDB1-224ENST00000545894 KTN1Q86UP2 1357 aaKnown RBP15.36■□□□□ 0.05
DDB1-224ENST00000545894 TMEM131LA2VDJ0 1609 aa15.36■□□□□ 0.05
DDB1-224ENST00000545894 ADGRB3O60242 1522 aa15.35■□□□□ 0.05
DDB1-224ENST00000545894 BRD4O60885 1362 aaPredicted RBP15.35■□□□□ 0.05
DDB1-224ENST00000545894 SETD1BQ9UPS6 1966 aaKnown RBP15.35■□□□□ 0.05
DDB1-224ENST00000545894 ANP32AP39687 249 aaKnown RBP15.34■□□□□ 0.05
DDB1-224ENST00000545894 MYBBP1AQ9BQG0 1328 aaKnown RBP15.34■□□□□ 0.05
DDB1-224ENST00000545894 RALBP1Q15311 655 aa15.34■□□□□ 0.05
DDB1-224ENST00000545894 UBR1Q8IWV7 1749 aa15.34■□□□□ 0.05
DDB1-224ENST00000545894 DEKP35659 375 aaKnown RBP15.33■□□□□ 0.05
DDB1-224ENST00000545894 THEMISQ8N1K5 641 aaPredicted RBP15.33■□□□□ 0.05
DDB1-224ENST00000545894 PAK3O75914 559 aaPredicted RBP15.33■□□□□ 0.04
DDB1-224ENST00000545894 ZNF142P52746 1687 aaPredicted RBP15.33■□□□□ 0.04
DDB1-224ENST00000545894 KIF1BO60333 1816 aa15.32■□□□□ 0.04
DDB1-224ENST00000545894 LMTK3Q96Q04 1460 aa15.32■□□□□ 0.04
DDB1-224ENST00000545894 ST20-MTHFSA0A0A6YYL1 179 aa15.32■□□□□ 0.04
DDB1-224ENST00000545894 IPO9Q96P70 1041 aaKnown RBP15.32■□□□□ 0.04
DDB1-224ENST00000545894 SENP3-EIF4A1A0A087X0R7 540 aa15.31■□□□□ 0.04
DDB1-224ENST00000545894 NEURL4Q96JN8 1562 aa15.31■□□□□ 0.04
DDB1-224ENST00000545894 KDM5AP29375 1690 aaKnown RBP15.3■□□□□ 0.04
DDB1-224ENST00000545894 HSPA2P54652 639 aa15.3■□□□□ 0.04
DDB1-224ENST00000545894 AEBP2Q6ZN18 517 aaPredicted RBP15.3■□□□□ 0.04
DDB1-224ENST00000545894 TMEM2Q9UHN6 1383 aa15.3■□□□□ 0.04
DDB1-224ENST00000545894 MYO5BQ9ULV0 1848 aa15.3■□□□□ 0.04
DDB1-224ENST00000545894 NUTM2DQ5VT03 806 aaPredicted RBP15.29■□□□□ 0.04
DDB1-224ENST00000545894 RPGRIP1LQ68CZ1 1315 aa15.29■□□□□ 0.04
DDB1-224ENST00000545894 KDM2AQ9Y2K7 1162 aa15.29■□□□□ 0.04
DDB1-224ENST00000545894 RIMS2Q9UQ26 1411 aa15.28■□□□□ 0.04
DDB1-224ENST00000545894 RRP1P56182 461 aaKnown RBP15.28■□□□□ 0.04
DDB1-224ENST00000545894 DCAF11Q8TEB1 546 aa15.28■□□□□ 0.04
DDB1-224ENST00000545894 ARHGAP23Q9P227 1491 aa15.28■□□□□ 0.04
DDB1-224ENST00000545894 ZFYVE9O95405 1425 aa15.28■□□□□ 0.04
DDB1-224ENST00000545894 LTKP29376 864 aa15.28■□□□□ 0.04
DDB1-224ENST00000545894 NBR1Q14596 966 aa15.28■□□□□ 0.04
DDB1-224ENST00000545894 SLIT1O75093 1534 aa15.27■□□□□ 0.04
DDB1-224ENST00000545894 NEXMIFQ5QGS0 1516 aa15.27■□□□□ 0.04
DDB1-224ENST00000545894 ZBTB47Q9UFB7 747 aaPredicted RBP15.27■□□□□ 0.03
DDB1-224ENST00000545894 TXNDC2Q86VQ3 553 aa15.26■□□□□ 0.03
DDB1-224ENST00000545894 PDE3BQ13370 1112 aa15.25■□□□□ 0.03
DDB1-224ENST00000545894 NLRP13Q86W25 1043 aa15.25■□□□□ 0.03
DDB1-224ENST00000545894 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.25■□□□□ 0.03
DDB1-224ENST00000545894 RCAN3Q9UKA8 241 aa15.25■□□□□ 0.03
DDB1-224ENST00000545894 EID1Q9Y6B2 187 aa15.24■□□□□ 0.03
DDB1-224ENST00000545894 ADGRF5Q8IZF2 1346 aa15.24■□□□□ 0.03
DDB1-224ENST00000545894 NCKAP5LQ9HCH0 1330 aa15.24■□□□□ 0.03
DDB1-224ENST00000545894 HDGFP51858 240 aaKnown RBP15.24■□□□□ 0.03
DDB1-224ENST00000545894 ANKLE2Q86XL3 938 aa15.24■□□□□ 0.03
DDB1-224ENST00000545894 SENP3Q9H4L4 574 aaPredicted RBP15.24■□□□□ 0.03
DDB1-224ENST00000545894 PARD3Q8TEW0 1356 aa15.24■□□□□ 0.03
DDB1-224ENST00000545894 VGFO15240 615 aaPredicted RBP15.23■□□□□ 0.03
DDB1-224ENST00000545894 TCERG1O14776 1098 aaKnown RBP15.23■□□□□ 0.03
DDB1-224ENST00000545894 EXOC6Q8TAG9 804 aa15.23■□□□□ 0.03
DDB1-224ENST00000545894 PPLO60437 1756 aa15.23■□□□□ 0.03
DDB1-224ENST00000545894 IFT172Q9UG01 1749 aa15.22■□□□□ 0.03
DDB1-224ENST00000545894 SCAF11Q99590 1463 aaKnown RBP15.22■□□□□ 0.03
DDB1-224ENST00000545894 MYOM2P54296 1465 aa15.21■□□□□ 0.02
DDB1-224ENST00000545894 STAC3Q96MF2 364 aa15.2■□□□□ 0.02
DDB1-224ENST00000545894 PRAG1Q86YV5 1406 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms