RNA–Protein interactions for RNA: ENST00000537403.5

SEC23A-202, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 2 BASIC

Gene SEC23A, Length 4,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-202ENST00000537403 SLIT1O75093 1534 aa5.51□□□□□ -1.53
SEC23A-202ENST00000537403 SALL2Q9Y467 1007 aaPredicted RBP5.51□□□□□ -1.53
SEC23A-202ENST00000537403 UNC13BO14795 1591 aa5.51□□□□□ -1.53
SEC23A-202ENST00000537403 HNRNPUQ00839 825 aaKnown RBP eCLIP5.51□□□□□ -1.53
SEC23A-202ENST00000537403 ABCC3O15438 1527 aa5.51□□□□□ -1.53
SEC23A-202ENST00000537403 FBXO41Q8TF61 875 aa5.5□□□□□ -1.53
SEC23A-202ENST00000537403 HIRIP3Q9BW71 556 aaPredicted RBP5.5□□□□□ -1.53
SEC23A-202ENST00000537403 A2MP01023 1474 aa5.5□□□□□ -1.53
SEC23A-202ENST00000537403 TET3O43151 1660 aa5.5□□□□□ -1.53
SEC23A-202ENST00000537403 LAMC1P11047 1609 aa5.5□□□□□ -1.53
SEC23A-202ENST00000537403 ARHGAP23Q9P227 1491 aa5.5□□□□□ -1.53
SEC23A-202ENST00000537403 TMC1Q8TDI8 760 aa5.5□□□□□ -1.53
SEC23A-202ENST00000537403 PTPN23Q9H3S7 1636 aa5.5□□□□□ -1.53
SEC23A-202ENST00000537403 A2ML1A8K2U0 1454 aa5.5□□□□□ -1.53
SEC23A-202ENST00000537403 NCOA2Q15596 1464 aa5.5□□□□□ -1.53
SEC23A-202ENST00000537403 ACIN1Q9UKV3 1341 aaKnown RBP5.5□□□□□ -1.53
SEC23A-202ENST00000537403 RGL3Q3MIN7 710 aa5.5□□□□□ -1.53
SEC23A-202ENST00000537403 SETD1AO15047 1707 aaKnown RBP5.49□□□□□ -1.53
SEC23A-202ENST00000537403 CPS1P31327 1500 aa5.49□□□□□ -1.53
SEC23A-202ENST00000537403 EIF4G2P78344 907 aaKnown RBP eCLIP5.48□□□□□ -1.53
SEC23A-202ENST00000537403 ARHGAP31Q2M1Z3 1444 aa5.48□□□□□ -1.53
SEC23A-202ENST00000537403 CCDC141Q6ZP82 1450 aa5.48□□□□□ -1.53
SEC23A-202ENST00000537403 IQGAP3Q86VI3 1631 aa5.48□□□□□ -1.53
SEC23A-202ENST00000537403 UHRF1BP1Q6BDS2 1440 aa5.48□□□□□ -1.53
SEC23A-202ENST00000537403 ADGRL2O95490 1459 aa5.48□□□□□ -1.53
SEC23A-202ENST00000537403 CHD2O14647 1828 aaKnown RBP5.47□□□□□ -1.53
SEC23A-202ENST00000537403 MYO5BQ9ULV0 1848 aa5.47□□□□□ -1.53
SEC23A-202ENST00000537403 LRRC9Q6ZRR7 1453 aa5.47□□□□□ -1.53
SEC23A-202ENST00000537403 PPP1R15AO75807 674 aaPredicted RBP5.47□□□□□ -1.53
SEC23A-202ENST00000537403 MRS2Q9HD23 443 aa5.47□□□□□ -1.53
SEC23A-202ENST00000537403 EFCAB6Q5THR3 1501 aa5.47□□□□□ -1.53
SEC23A-202ENST00000537403 CHADLQ6NUI6 762 aa5.47□□□□□ -1.53
SEC23A-202ENST00000537403 NLRP1Q9C000 1473 aa5.46□□□□□ -1.53
SEC23A-202ENST00000537403 ARID4BQ4LE39 1312 aaPredicted RBP5.46□□□□□ -1.54
SEC23A-202ENST00000537403 DUOX2Q9NRD8 1548 aa5.46□□□□□ -1.54
SEC23A-202ENST00000537403 MIER1Q8N108 512 aa5.46□□□□□ -1.54
SEC23A-202ENST00000537403 NRXN3Q9Y4C0 1643 aa5.46□□□□□ -1.54
SEC23A-202ENST00000537403 MIA2Q96PC5 1412 aa5.45□□□□□ -1.54
SEC23A-202ENST00000537403 WDR43Q15061 677 aaKnown RBP eCLIP5.45□□□□□ -1.54
SEC23A-202ENST00000537403 REM2Q8IYK8 340 aaPredicted RBP5.45□□□□□ -1.54
SEC23A-202ENST00000537403 PLCD3Q8N3E9 789 aa5.45□□□□□ -1.54
SEC23A-202ENST00000537403 TMEM131LA2VDJ0 1609 aa5.45□□□□□ -1.54
SEC23A-202ENST00000537403 PITPNM1O00562 1244 aa5.44□□□□□ -1.54
SEC23A-202ENST00000537403 EFCAB2Q5VUJ9 269 aa5.44□□□□□ -1.54
SEC23A-202ENST00000537403 DHX29Q7Z478 1369 aaKnown RBP5.44□□□□□ -1.54
SEC23A-202ENST00000537403 ERVK-7P63135 1459 aa5.44□□□□□ -1.54
SEC23A-202ENST00000537403 ERBINQ96RT1 1412 aa5.44□□□□□ -1.54
SEC23A-202ENST00000537403 E9PCH4 1651 aa5.44□□□□□ -1.54
SEC23A-202ENST00000537403 IFT172Q9UG01 1749 aa5.44□□□□□ -1.54
SEC23A-202ENST00000537403 MED1Q15648 1581 aaPredicted RBP5.44□□□□□ -1.54
SEC23A-202ENST00000537403 PLEKHG5O94827 1062 aa5.43□□□□□ -1.54
SEC23A-202ENST00000537403 KLHL34Q8N239 644 aa5.43□□□□□ -1.54
SEC23A-202ENST00000537403 XRN1Q8IZH2 1706 aaKnown RBP5.43□□□□□ -1.54
SEC23A-202ENST00000537403 VPS8Q8N3P4 1428 aa5.43□□□□□ -1.54
SEC23A-202ENST00000537403 C14orf37Q86TY3 774 aa5.43□□□□□ -1.54
SEC23A-202ENST00000537403 ZMYM3Q14202 1370 aa5.43□□□□□ -1.54
SEC23A-202ENST00000537403 ADGRB3O60242 1522 aa5.42□□□□□ -1.54
SEC23A-202ENST00000537403 SIN3AQ96ST3 1273 aa5.42□□□□□ -1.54
SEC23A-202ENST00000537403 DIP2AQ14689 1571 aa5.42□□□□□ -1.54
SEC23A-202ENST00000537403 PRAG1Q86YV5 1406 aa5.42□□□□□ -1.54
SEC23A-202ENST00000537403 SHPRHQ149N8 1683 aa5.42□□□□□ -1.54
SEC23A-202ENST00000537403 CCNB3Q8WWL7 1395 aa5.42□□□□□ -1.54
SEC23A-202ENST00000537403 NPM2Q86SE8 214 aaKnown RBP5.42□□□□□ -1.54
SEC23A-202ENST00000537403 CARD11Q9BXL7 1154 aa5.42□□□□□ -1.54
SEC23A-202ENST00000537403 ANP32AP39687 249 aaKnown RBP5.41□□□□□ -1.54
SEC23A-202ENST00000537403 FBXO3Q9UK99 471 aa5.41□□□□□ -1.54
SEC23A-202ENST00000537403 AFAP1Q8N556 730 aa5.41□□□□□ -1.54
SEC23A-202ENST00000537403 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.41□□□□□ -1.54
SEC23A-202ENST00000537403 NOS1P29475 1434 aa5.41□□□□□ -1.54
SEC23A-202ENST00000537403 CCDC136Q96JN2 1154 aa5.4□□□□□ -1.54
SEC23A-202ENST00000537403 LRRC7Q96NW7 1537 aa5.4□□□□□ -1.54
SEC23A-202ENST00000537403 NHSL1Q5SYE7 1610 aa5.4□□□□□ -1.54
SEC23A-202ENST00000537403 ZBTB7CA1YPR0 619 aa5.4□□□□□ -1.54
SEC23A-202ENST00000537403 SPHKAPQ2M3C7 1700 aa5.4□□□□□ -1.54
SEC23A-202ENST00000537403 RPRD2Q5VT52 1461 aaKnown RBP5.4□□□□□ -1.55
SEC23A-202ENST00000537403 A0A0G2JS52 829 aa5.4□□□□□ -1.55
SEC23A-202ENST00000537403 CDCA8Q53HL2 280 aa5.4□□□□□ -1.55
SEC23A-202ENST00000537403 CERKQ8TCT0 537 aa5.4□□□□□ -1.55
SEC23A-202ENST00000537403 MYOM3Q5VTT5 1437 aa5.4□□□□□ -1.55
SEC23A-202ENST00000537403 RBM42Q9BTD8 480 aaKnown RBP5.39□□□□□ -1.55
SEC23A-202ENST00000537403 KNSTRNQ9Y448 316 aa5.39□□□□□ -1.55
SEC23A-202ENST00000537403 COL16A1Q07092 1604 aaPredicted RBP5.39□□□□□ -1.55
SEC23A-202ENST00000537403 MLECQ14165 292 aa5.39□□□□□ -1.55
SEC23A-202ENST00000537403 ZFYVE9O95405 1425 aa5.38□□□□□ -1.55
SEC23A-202ENST00000537403 SETBP1Q9Y6X0 1596 aa5.38□□□□□ -1.55
SEC23A-202ENST00000537403 ABCC5O15440 1437 aa5.38□□□□□ -1.55
SEC23A-202ENST00000537403 SENP3-EIF4A1A0A087X0R7 540 aa5.38□□□□□ -1.55
SEC23A-202ENST00000537403 PPM1GO15355 546 aaPredicted RBP5.38□□□□□ -1.55
SEC23A-202ENST00000537403 UPF2Q9HAU5 1272 aaKnown RBP5.38□□□□□ -1.55
SEC23A-202ENST00000537403 POGKQ9P215 609 aa5.38□□□□□ -1.55
SEC23A-202ENST00000537403 KANK4Q5T7N3 995 aaPredicted RBP5.38□□□□□ -1.55
SEC23A-202ENST00000537403 KNDC1Q76NI1 1749 aa5.38□□□□□ -1.55
SEC23A-202ENST00000537403 AHDC1Q5TGY3 1603 aaPredicted RBP5.37□□□□□ -1.55
SEC23A-202ENST00000537403 HSP90AA1P07900 732 aaKnown RBP5.37□□□□□ -1.55
SEC23A-202ENST00000537403 PKD2Q13563 968 aa5.37□□□□□ -1.55
SEC23A-202ENST00000537403 GGT6Q6P531 493 aa5.37□□□□□ -1.55
SEC23A-202ENST00000537403 IRX6P78412 446 aaPredicted RBP5.37□□□□□ -1.55
SEC23A-202ENST00000537403 DCAF11Q8TEB1 546 aa5.37□□□□□ -1.55
SEC23A-202ENST00000537403 CFAP53Q96M91 514 aa5.37□□□□□ -1.55
SEC23A-202ENST00000537403 DAPK1P53355 1430 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms